Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   OHU75_RS07765 Genome accession   NZ_CP109761
Coordinates   1397475..1398716 (-) Length   413 a.a.
NCBI ID   WP_098579291.1    Uniprot ID   -
Organism   Priestia megaterium strain P-NA14     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1392475..1403716
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHU75_RS07745 (OHU75_07745) spoVS 1393035..1393295 (-) 261 WP_003181955.1 stage V sporulation protein SpoVS -
  OHU75_RS07750 (OHU75_07750) - 1393519..1394316 (-) 798 WP_025750269.1 TIGR00282 family metallophosphoesterase -
  OHU75_RS07755 (OHU75_07755) rny 1394398..1395957 (-) 1560 WP_013058803.1 ribonuclease Y -
  OHU75_RS07760 (OHU75_07760) recA 1396238..1397275 (-) 1038 WP_028410857.1 recombinase RecA Machinery gene
  OHU75_RS07765 (OHU75_07765) cinA 1397475..1398716 (-) 1242 WP_098579291.1 competence/damage-inducible protein A Machinery gene
  OHU75_RS07770 (OHU75_07770) pgsA 1398733..1399317 (-) 585 WP_013058806.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  OHU75_RS07775 (OHU75_07775) - 1399462..1400460 (-) 999 WP_255266895.1 helix-turn-helix domain-containing protein -
  OHU75_RS07780 (OHU75_07780) - 1400473..1401264 (-) 792 WP_013058808.1 DUF3388 domain-containing protein -
  OHU75_RS07785 (OHU75_07785) - 1401478..1401738 (-) 261 WP_028410855.1 DUF3243 domain-containing protein -
  OHU75_RS07790 (OHU75_07790) ymfI 1401804..1402529 (-) 726 WP_264388234.1 elongation factor P 5-aminopentanone reductase -

Sequence

Protein


Download         Length: 413 a.a.        Molecular weight: 44928.03 Da        Isoelectric Point: 4.9140

>NTDB_id=749036 OHU75_RS07765 WP_098579291.1 1397475..1398716(-) (cinA) [Priestia megaterium strain P-NA14]
MMNAEIIGVGSELLLGQIANTNAQYLSKKLAELGINVYYHTVVGDNAQRLKEVIATAQTRAELIIFTGGLGPTKDDLTKE
TIASVLGAELTTNAEALESIEAYFKQSNRIMTPNNKKQAIVLEGSAVLPNDYGMAPGMGLTVEGKHYMLFPGPPKELYPM
YESYGQEFLAQKLELKESIESRVLRFFGIGESQLETEIEDLLDAQTNPTIAPLAGDGEVTLRLTAKHADAAEAQRMLDEV
EKTISERVGEYLYGYEATSLHNELVKELTAQGLTIASAESLTGGLFSERLTTVSGAGEVVKGSLVAYHYEIKQNILGVSE
HTLNQYGAVSEQCAAEMAQRIQQLYKTDIGIGFTGVAGPSKQEGHPVGTVYIGVAYKDQAPQVYSLQLSGSRQGIRSRTV
NYGCHYVLKMIKK

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=749036 OHU75_RS07765 WP_098579291.1 1397475..1398716(-) (cinA) [Priestia megaterium strain P-NA14]
ATGATGAACGCTGAAATTATTGGAGTCGGCTCTGAGCTGCTGCTTGGACAAATTGCCAATACAAACGCTCAGTATTTATC
GAAAAAATTAGCCGAACTTGGAATTAATGTTTACTATCATACGGTAGTAGGAGATAATGCACAGCGCTTAAAAGAAGTGA
TTGCTACAGCTCAAACGCGTGCGGAGTTAATTATTTTCACAGGCGGGCTTGGTCCTACAAAAGATGATTTAACAAAAGAA
ACAATTGCGAGTGTGCTAGGAGCAGAGCTGACAACAAATGCAGAAGCCCTTGAAAGTATTGAAGCCTATTTCAAACAGTC
AAATCGTATCATGACACCTAACAATAAAAAACAGGCAATTGTGCTAGAAGGTTCGGCAGTGCTCCCTAACGATTACGGAA
TGGCTCCAGGTATGGGGCTTACAGTAGAGGGAAAACACTATATGCTATTTCCAGGGCCTCCAAAAGAGCTTTATCCAATG
TATGAATCGTATGGCCAAGAATTTTTAGCTCAAAAGCTTGAATTAAAAGAAAGTATTGAATCACGCGTTCTTCGCTTTTT
CGGAATAGGAGAATCACAGCTTGAGACGGAAATTGAAGATTTGCTTGATGCACAAACCAACCCGACGATTGCACCGCTAG
CAGGAGATGGGGAAGTGACGCTTCGCTTAACTGCTAAGCACGCTGATGCTGCTGAAGCACAGCGCATGTTAGACGAAGTG
GAAAAAACCATTTCAGAGCGCGTAGGCGAGTATTTATATGGATACGAAGCAACTTCTTTACATAATGAATTGGTAAAAGA
ATTAACGGCACAAGGATTAACGATTGCTTCAGCCGAAAGTTTAACTGGCGGTTTATTCAGCGAACGTTTAACAACTGTTT
CAGGTGCTGGAGAAGTTGTAAAAGGTAGCCTGGTCGCCTATCATTATGAAATCAAGCAAAATATTCTCGGAGTGAGCGAA
CACACGTTGAATCAGTACGGAGCCGTTAGCGAGCAGTGCGCGGCTGAAATGGCTCAGCGTATTCAACAGTTATACAAAAC
GGATATTGGCATCGGGTTTACAGGTGTAGCTGGACCCTCCAAACAAGAAGGACATCCTGTAGGAACAGTATATATAGGGG
TAGCCTATAAAGATCAAGCTCCTCAAGTTTACAGCCTGCAGCTATCCGGAAGCCGCCAGGGGATTCGTTCACGAACGGTT
AATTATGGCTGTCATTACGTATTAAAGATGATAAAGAAATAA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(258-410)

Probable molybdopterin binding domain (MoCF_biosynth)

(6-169)

Damage-inducible protein CinA KH domain (CinA_KH)

(181-254)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

59.512

99.274

0.591
  cinA Streptococcus mitis NCTC 12261

46.905

100

0.477
  cinA Streptococcus pneumoniae TIGR4

46.19

100

0.47
  cinA Streptococcus mitis SK321

46.19

100

0.47
  cinA Streptococcus pneumoniae Rx1

45.714

100

0.465
  cinA Streptococcus pneumoniae R6

45.714

100

0.465
  cinA Streptococcus pneumoniae D39

45.476

100

0.462
  cinA Streptococcus mutans UA159

44.634

99.274

0.443