Detailed information NTG0074389

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: K5706_RS02665
• Genome accession: NZ_AP019849
• Coordinates: 552460..553503 (+)
• Length: 347 a.a.
• NCBI ID: WP_221070935.1
• Uniprot ID: -
• Organism: Vibrio alfacsensis strain 04Ya249
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 547460..558503

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K5706_RS02650 (VA249_04490)	rpoS	548054..549040 (+)	987	WP_221070934.1	RNA polymerase sigma factor RpoS	Regulator
K5706_RS02655 (VA249_04500)	mutS	549131..551692 (-)	2562	WP_221068111.1	DNA mismatch repair protein MutS	-
K5706_RS02660 (VA249_04510)	pncC	551777..552259 (+)	483	WP_221068110.1	nicotinamide-nucleotide amidase	-
K5706_RS02665 (VA249_04520)	recA	552460..553503 (+)	1044	WP_221070935.1	recombinase RecA	Machinery gene
K5706_RS02670 (VA249_04530)	recX	553711..554178 (+)	468	WP_221068108.1	recombination regulator RecX	-
K5706_RS02675 (VA249_04540)	alaS	554321..556918 (+)	2598	WP_221070936.1	alanine--tRNA ligase	-
K5706_RS02680 (VA249_04550)	-	557118..558305 (+)	1188	WP_221068106.1	aspartate kinase	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37532.94 Da
• Isoelectric Point: 4.8912

>NTDB_id=74389 K5706_RS02665 WP_221070935.1 552460..553503(+) (recA) [Vibrio alfacsensis strain 04Ya249]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPVYAKKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVMVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE
TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKLVEKAGAWYSYNGDKIGQGKANACNYLRENPEIAKTIDT
KLREMLLSPALPDAPESDEKSEQEEEF

Nucleotide

• Length: 1044 bp

>NTDB_id=74389 K5706_RS02665 WP_221070935.1 552460..553503(+) (recA) [Vibrio alfacsensis strain 04Ya249]
ATGGACGAGAACAAACAGAAAGCGCTCGCCGCTGCGCTAGGTCAAATTGAAAAGCAATTCGGTAAAGGCTCTATCATGCG
TCTTGGCGACAACCGCACAATGGACGTAGAAACCATTTCAACGGGTTCTCTTTCTCTTGATATCGCTTTGGGTGCTGGTG
GCCTGCCAATGGGTCGTATCGTAGAAATCTACGGTCCAGAATCTTCAGGTAAAACAACATTAACACTAGAGCTTATTGCC
GCCGCGCAACGTGAAGGTAAAACTTGTGCGTTTATCGATGCAGAGCACGCGCTAGACCCGGTATACGCGAAGAAGCTTGG
TGTTGATATCGACGCACTGTTAGTTTCTCAGCCAGATACGGGTGAGCAAGCTCTAGAGATCTGTGACGCACTGGCACGTT
CTGGTGCTATCGACGTTATGGTTGTCGATTCAGTAGCCGCACTGACACCAAAAGCAGAAATTGAAGGTGAAATGGGCGAT
AGCCACATGGGCCTTCAAGCTCGTATGCTTTCTCAAGCAATGCGTAAGCTAACGGGTAACCTAAAACAGTCTAACTGTAT
GTGTATCTTCATCAACCAGATTCGTATGAAGATTGGTGTGATGTTCGGTAACCCAGAGACAACTACAGGTGGTAACGCAC
TTAAGTTCTACGCTTCTGTTCGCCTAGATATTCGCCGTACTGGTGCAATCAAAGAAGGTGATGAGGTTGTTGGTAACGAA
ACTCGCATCAAAGTGGTTAAGAACAAGATTGCTGCCCCGTTTAAAGAAGCAAACACGCAAATCATGTACGGTCAGGGTTT
CAACCGCGAAGGTGAATTGATCGACCTAGGCGTGAAGCACAAGCTAGTTGAAAAAGCAGGCGCTTGGTACAGCTACAATG
GCGATAAGATTGGTCAAGGTAAAGCGAACGCTTGTAACTACCTACGCGAAAACCCTGAGATTGCTAAGACTATCGATACC
AAACTTCGTGAAATGTTGCTTTCTCCGGCACTCCCTGATGCGCCAGAATCAGATGAAAAATCAGAGCAAGAAGAAGAGTT
TTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae O1 biovar El Tor strain E7946	95.745	94.813	0.908
recA	Vibrio cholerae strain A1552	95.745	94.813	0.908
recA	Acinetobacter baylyi ADP1	72.595	98.847	0.718
recA	Acinetobacter baumannii D1279779	72.515	98.559	0.715
recA	Pseudomonas stutzeri DSM 10701	75.535	94.236	0.712
recA	Glaesserella parasuis strain SC1401	68.678	100	0.689
recA	Neisseria gonorrhoeae MS11	69.018	93.948	0.648
recA	Neisseria gonorrhoeae MS11	69.018	93.948	0.648
recA	Neisseria gonorrhoeae strain FA1090	69.018	93.948	0.648
recA	Ralstonia pseudosolanacearum GMI1000	71.704	89.625	0.643
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60.641	98.847	0.599
recA	Helicobacter pylori strain NCTC11637	61.176	97.983	0.599
recA	Helicobacter pylori 26695	60.882	97.983	0.597
recA	Streptococcus mitis SK321	59.593	99.135	0.591
recA	Streptococcus pneumoniae R6	62.539	93.084	0.582
recA	Streptococcus pneumoniae TIGR4	62.539	93.084	0.582
recA	Streptococcus pneumoniae Rx1	62.539	93.084	0.582
recA	Streptococcus pneumoniae D39	62.539	93.084	0.582
recA	Bacillus subtilis subsp. subtilis str. 168	62.928	92.507	0.582
recA	Streptococcus mitis NCTC 12261	62.229	93.084	0.579
recA	Streptococcus mutans UA159	61.231	93.66	0.573
recA	Latilactobacillus sakei subsp. sakei 23K	57.681	99.424	0.573
recA	Streptococcus pyogenes NZ131	60.923	93.66	0.571
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.517	95.389	0.568
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.371	92.507	0.568
recA	Lactococcus lactis subsp. cremoris KW2	60.372	93.084	0.562