Detailed information NTG0073038

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: GZI12_RS02050
• Genome accession: NZ_AP019651
• Coordinates: 409394..410434 (+)
• Length: 346 a.a.
• NCBI ID: WP_162047509.1
• Uniprot ID: -
• Organism: Vibrio taketomensis strain C4III291
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 404394..415434

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GZI12_RS02035	pilA	405133..405543 (-)	411	WP_162045551.1	type IV pilin subunit protein	Machinery gene
GZI12_RS02040	mutS	405794..408361 (-)	2568	WP_162045552.1	DNA mismatch repair protein MutS	-
GZI12_RS02045	-	408446..408934 (+)	489	WP_162045553.1	nicotinamide-nucleotide amidohydrolase family protein	-
GZI12_RS02050	recA	409394..410434 (+)	1041	WP_162047509.1	recombinase RecA	Machinery gene
GZI12_RS02055	alaS	410761..413343 (+)	2583	WP_162045554.1	alanine--tRNA ligase	-
GZI12_RS02060	-	413500..414687 (+)	1188	WP_162045555.1	aspartate kinase	-
GZI12_RS02065	csrA	414780..414977 (+)	198	WP_004415691.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 37381.84 Da
• Isoelectric Point: 4.9706

>NTDB_id=73038 GZI12_RS02050 WP_162047509.1 409394..410434(+) (recA) [Vibrio taketomensis strain C4III291]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPIYAKKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVLVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKEGDEVVGNE
TRIKVVKNKIAAPFKQADTQILYGQGFNREGELIDLGVKHKLVEKAGAWYSYNGDKIGQGKANACKFLKENPEAAKTIDT
KLREMLLSPAQPEEPETGEMPQEEEF

Nucleotide

• Length: 1041 bp

>NTDB_id=73038 GZI12_RS02050 WP_162047509.1 409394..410434(+) (recA) [Vibrio taketomensis strain C4III291]
ATGGACGAGAACAAACAAAAAGCCCTCGCCGCTGCGCTAGGTCAGATTGAAAAGCAATTCGGTAAAGGCTCAATTATGCG
CCTTGGCGACAACCGCACCATGGATGTAGAAACCATTTCAACTGGTTCACTTTCTCTAGATATCGCACTAGGTGCTGGTG
GTCTACCAATGGGTCGTATCGTAGAAATCTACGGTCCAGAATCTTCAGGTAAAACAACGCTGACACTTGAGCTGATTGCC
GCTGCGCAACGTGAAGGTAAAACTTGTGCCTTTATCGATGCAGAGCACGCACTTGACCCTATCTACGCAAAAAAATTGGG
CGTAGATATCGATGCTCTTTTGGTTTCTCAGCCAGATACGGGTGAGCAAGCGTTAGAAATCTGTGATGCACTAGCTCGCT
CTGGTGCGATTGATGTTTTGGTGGTTGACTCAGTAGCAGCGCTAACACCGAAAGCTGAAATTGAAGGCGAAATGGGTGAC
AGCCACATGGGTCTGCAAGCTCGTATGCTTTCACAAGCGATGCGTAAGCTAACGGGTAACCTAAAGCAGTCAAACTGTAT
GTGTATCTTCATTAACCAAATTCGTATGAAGATCGGTGTGATGTTTGGTAACCCAGAAACGACAACGGGTGGTAACGCAC
TGAAGTTTTACGCTTCTGTTCGTCTTGATATTCGTCGTACCGGTTCTATCAAAGAAGGCGACGAAGTGGTGGGTAACGAA
ACTCGCATCAAAGTGGTTAAGAACAAGATCGCAGCACCATTTAAACAAGCAGACACGCAAATTCTTTACGGTCAAGGCTT
TAACCGTGAAGGTGAGCTGATTGACCTAGGTGTTAAACACAAACTGGTGGAAAAAGCGGGTGCGTGGTACAGCTACAATG
GCGACAAGATCGGCCAAGGTAAAGCGAACGCATGTAAGTTCTTAAAAGAGAACCCAGAAGCAGCGAAAACTATCGACACC
AAACTGCGTGAAATGCTGCTAAGCCCAGCTCAACCTGAAGAGCCAGAAACGGGTGAAATGCCACAAGAAGAAGAGTTCTA
A

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	88.952	100	0.908
recA	Vibrio cholerae O1 biovar El Tor strain E7946	88.952	100	0.908
recA	Pseudomonas stutzeri DSM 10701	75.535	94.509	0.714
recA	Acinetobacter baylyi ADP1	71.098	100	0.711
recA	Acinetobacter baumannii D1279779	74.39	94.798	0.705
recA	Neisseria gonorrhoeae MS11	67.049	100	0.676
recA	Neisseria gonorrhoeae MS11	67.049	100	0.676
recA	Neisseria gonorrhoeae strain FA1090	67.049	100	0.676
recA	Glaesserella parasuis strain SC1401	70.552	94.22	0.665
recA	Ralstonia pseudosolanacearum GMI1000	72.026	89.884	0.647
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.111	98.844	0.604
recA	Helicobacter pylori 26695	60.588	98.266	0.595
recA	Helicobacter pylori strain NCTC11637	60.294	98.266	0.592
recA	Bacillus subtilis subsp. subtilis str. 168	62.617	92.775	0.581
recA	Streptococcus mutans UA159	61.231	93.931	0.575
recA	Streptococcus pneumoniae Rx1	61.61	93.353	0.575
recA	Streptococcus pneumoniae R6	61.61	93.353	0.575
recA	Streptococcus pneumoniae TIGR4	61.61	93.353	0.575
recA	Streptococcus pneumoniae D39	61.61	93.353	0.575
recA	Streptococcus mitis NCTC 12261	61.3	93.353	0.572
recA	Streptococcus mitis SK321	61.3	93.353	0.572
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.517	95.665	0.569
recA	Latilactobacillus sakei subsp. sakei 23K	57.434	99.133	0.569
recA	Streptococcus pyogenes NZ131	60.308	93.931	0.566
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.436	92.775	0.561
recA	Lactococcus lactis subsp. cremoris KW2	59.752	93.353	0.558