Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   PPM30_RS19605 Genome accession   NZ_CP116868
Coordinates   3755109..3755957 (-) Length   282 a.a.
NCBI ID   WP_003226832.1    Uniprot ID   P26497
Organism   Bacillus subtilis subsp. subtilis strain MGP003     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3750109..3760957
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PPM30_RS19585 yyaE 3750623..3752626 (-) 2004 WP_003244290.1 molybdopterin-dependent oxidoreductase -
  PPM30_RS19590 yyzM 3752677..3752883 (-) 207 WP_003226838.1 DUF951 domain-containing protein -
  PPM30_RS19595 - 3752977..3753993 (-) 1017 WP_010886647.1 membrane protein -
  PPM30_RS19600 yyaC 3754453..3755070 (+) 618 WP_003243890.1 spore protease YyaC -
  PPM30_RS19605 spo0J 3755109..3755957 (-) 849 WP_003226832.1 stage 0 sporulation protein Spo0J Regulator
  PPM30_RS19610 soj 3755950..3756711 (-) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  PPM30_RS19615 yyaB 3756959..3757399 (+) 441 WP_003244005.1 PH domain-containing protein -
  PPM30_RS19620 noc 3757450..3758301 (-) 852 WP_003226829.1 nucleoid occlusion protein -
  PPM30_RS19625 rsmG 3758423..3759142 (-) 720 WP_003243029.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32210.16 Da        Isoelectric Point: 8.3881

>NTDB_id=713617 PPM30_RS19605 WP_003226832.1 3755109..3755957(-) (spo0J) [Bacillus subtilis subsp. subtilis strain MGP003]
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=713617 PPM30_RS19605 WP_003226832.1 3755109..3755957(-) (spo0J) [Bacillus subtilis subsp. subtilis strain MGP003]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTTTATTAGAAAACCTTCAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCCTTTTGAAACACT
TAGATCTCACACAAGAGCAGCTTGCCAAACGTCTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAACAGCTTATTGCCGAAGGCACGCTTTCTATGGGACATGGACGCACGCTTCTTGGCTTAAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTCAATGTTCGCCAACTTGAGCAGCTGATTCAGC
AGTTGAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCGGTTCTAAAAGAACGGGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCATAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(163-214)

ParB/Sulfiredoxin domain (ParB_N)

(24-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5NOC
  PDB 6SDK

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387