Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   PF364_RS01285 Genome accession   NZ_CP115621
Coordinates   262810..263445 (-) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain 2022CK-00480     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 257810..268445
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PF364_RS01270 (PF364_01270) - 258598..259782 (+) 1185 WP_000939111.1 S41 family peptidase -
  PF364_RS01275 (PF364_01275) - 259786..261207 (-) 1422 WP_031959790.1 sigma-54 dependent transcriptional regulator -
  PF364_RS01280 (PF364_01280) pilS 261231..262799 (-) 1569 WP_001160328.1 ATP-binding protein Regulator
  PF364_RS01285 (PF364_01285) letA 262810..263445 (-) 636 WP_000633799.1 response regulator Regulator
  PF364_RS01290 (PF364_01290) pbpG 263658..264704 (+) 1047 WP_001984577.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  PF364_RS01295 (PF364_01295) thrC 264812..265951 (-) 1140 WP_000063593.1 threonine synthase -
  PF364_RS01300 (PF364_01300) - 266007..267308 (-) 1302 WP_000805827.1 homoserine dehydrogenase -
  PF364_RS01305 (PF364_01305) - 267553..268368 (-) 816 WP_000011161.1 DsbC family protein -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=705063 PF364_RS01285 WP_000633799.1 262810..263445(-) (letA) [Acinetobacter baumannii strain 2022CK-00480]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=705063 PF364_RS01285 WP_000633799.1 262810..263445(-) (letA) [Acinetobacter baumannii strain 2022CK-00480]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACGAAAGGCGCACC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55