Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | MUA43_RS07320 | Genome accession | NZ_CP094812 |
| Coordinates | 1499905..1500948 (-) | Length | 347 a.a. |
| NCBI ID | WP_060550930.1 | Uniprot ID | A0A242VIQ5 |
| Organism | Staphylococcus agnetis strain IVB6186 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1500930..1568799 | 1499905..1500948 | flank | -18 |
Gene organization within MGE regions
Location: 1499905..1568799
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MUA43_RS07320 (MUA43_07305) | recA | 1499905..1500948 (-) | 1044 | WP_060550930.1 | recombinase RecA | Machinery gene |
| MUA43_RS07325 (MUA43_07310) | - | 1501116..1502261 (-) | 1146 | WP_060550929.1 | CinA family nicotinamide mononucleotide deamidase-related protein | - |
| MUA43_RS07330 (MUA43_07315) | pgsA | 1502361..1502945 (-) | 585 | WP_037564617.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| MUA43_RS07335 (MUA43_07320) | - | 1502989..1503384 (-) | 396 | WP_060550928.1 | RodZ family helix-turn-helix domain-containing protein | - |
| MUA43_RS07340 (MUA43_07325) | - | 1503397..1504269 (-) | 873 | WP_060550927.1 | DUF3388 domain-containing protein | - |
| MUA43_RS07345 (MUA43_07330) | ymfI | 1504321..1505025 (-) | 705 | WP_060550926.1 | elongation factor P 5-aminopentanone reductase | - |
| MUA43_RS07350 (MUA43_07335) | yfmH | 1505028..1506311 (-) | 1284 | WP_060550925.1 | EF-P 5-aminopentanol modification-associated protein YfmH | - |
| MUA43_RS07355 (MUA43_07340) | yfmF | 1506292..1507578 (-) | 1287 | WP_060550924.1 | EF-P 5-aminopentanol modification-associated protein YfmF | - |
| MUA43_RS07360 (MUA43_07345) | - | 1507609..1508325 (-) | 717 | WP_060550923.1 | GntR family transcriptional regulator | - |
| MUA43_RS07365 (MUA43_07350) | - | 1508328..1510676 (-) | 2349 | WP_060550922.1 | DNA translocase FtsK | - |
| MUA43_RS07370 (MUA43_07355) | rnjB | 1510876..1512549 (-) | 1674 | WP_037564634.1 | ribonuclease J2 | - |
| MUA43_RS07375 (MUA43_07360) | - | 1512984..1514300 (-) | 1317 | WP_060550921.1 | neutral metalloprotease | - |
| MUA43_RS07380 (MUA43_07365) | pnp | 1514670..1516772 (-) | 2103 | WP_262608200.1 | polyribonucleotide nucleotidyltransferase | - |
| MUA43_RS07385 (MUA43_07370) | rpsO | 1516941..1517210 (-) | 270 | WP_037564639.1 | 30S ribosomal protein S15 | - |
| MUA43_RS07390 (MUA43_07375) | - | 1517314..1518285 (-) | 972 | WP_060550919.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| MUA43_RS07395 (MUA43_07380) | truB | 1518300..1519217 (-) | 918 | WP_262608201.1 | tRNA pseudouridine(55) synthase TruB | - |
| MUA43_RS07400 (MUA43_07385) | rbfA | 1519291..1519635 (-) | 345 | WP_037564645.1 | 30S ribosome-binding factor RbfA | - |
| MUA43_RS07405 (MUA43_07390) | - | 1519733..1520116 (-) | 384 | WP_060550917.1 | VOC family protein | - |
| MUA43_RS07410 (MUA43_07395) | infB | 1520314..1522446 (-) | 2133 | WP_060550916.1 | translation initiation factor IF-2 | - |
| MUA43_RS07415 (MUA43_07400) | - | 1522463..1522765 (-) | 303 | WP_060550915.1 | YlxQ family RNA-binding protein | - |
| MUA43_RS07420 (MUA43_07405) | rnpM | 1522762..1523049 (-) | 288 | WP_037564655.1 | RNase P modulator RnpM | - |
| MUA43_RS07425 (MUA43_07410) | nusA | 1523207..1524239 (-) | 1033 | Protein_1428 | transcription termination factor NusA | - |
| MUA43_RS07430 (MUA43_07415) | rimP | 1524259..1524726 (-) | 468 | WP_060550914.1 | ribosome maturation factor RimP | - |
| MUA43_RS07435 (MUA43_07420) | - | 1524854..1529164 (-) | 4311 | WP_262608203.1 | PolC-type DNA polymerase III | - |
| MUA43_RS07440 (MUA43_07425) | - | 1529363..1531069 (-) | 1707 | WP_107368342.1 | proline--tRNA ligase | - |
| MUA43_RS07445 (MUA43_07430) | rseP | 1531098..1532378 (-) | 1281 | WP_262608204.1 | RIP metalloprotease RseP | - |
| MUA43_RS07450 (MUA43_07435) | - | 1532385..1533515 (-) | 1131 | WP_262608205.1 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | - |
| MUA43_RS07455 (MUA43_07440) | - | 1533531..1534310 (-) | 780 | WP_085622311.1 | phosphatidate cytidylyltransferase | - |
| MUA43_RS07460 (MUA43_07445) | - | 1534324..1535085 (-) | 762 | WP_037564674.1 | isoprenyl transferase | - |
| MUA43_RS07465 (MUA43_07450) | frr | 1535235..1535789 (-) | 555 | WP_037564677.1 | ribosome recycling factor | - |
| MUA43_RS07470 (MUA43_07455) | pyrH | 1535808..1536530 (-) | 723 | WP_037564679.1 | UMP kinase | - |
| MUA43_RS07475 (MUA43_07460) | tsf | 1536684..1537565 (-) | 882 | WP_171509145.1 | translation elongation factor Ts | - |
| MUA43_RS07480 (MUA43_07465) | rpsB | 1537736..1538512 (-) | 777 | WP_037564683.1 | 30S ribosomal protein S2 | - |
| MUA43_RS07485 (MUA43_07470) | codY | 1538674..1539447 (-) | 774 | WP_060550908.1 | GTP-sensing pleiotropic transcriptional regulator CodY | - |
| MUA43_RS07490 (MUA43_07475) | hslU | 1539462..1540871 (-) | 1410 | WP_037564687.1 | ATP-dependent protease ATPase subunit HslU | - |
| MUA43_RS07495 (MUA43_07480) | hslV | 1540888..1541430 (-) | 543 | WP_060550906.1 | ATP-dependent protease subunit HslV | - |
| MUA43_RS07500 (MUA43_07485) | xerC | 1541434..1542324 (-) | 891 | WP_060550905.1 | tyrosine recombinase XerC | - |
| MUA43_RS07505 (MUA43_07490) | trmFO | 1542445..1543749 (-) | 1305 | WP_105995826.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| MUA43_RS07510 (MUA43_07495) | topA | 1543762..1545831 (-) | 2070 | WP_060550903.1 | type I DNA topoisomerase | - |
| MUA43_RS07515 (MUA43_07500) | dprA | 1545926..1546807 (-) | 882 | WP_262608206.1 | DNA-processing protein DprA | Machinery gene |
| MUA43_RS07520 (MUA43_07505) | sucD | 1547020..1547928 (-) | 909 | WP_060550901.1 | succinate--CoA ligase subunit alpha | - |
| MUA43_RS07525 (MUA43_07510) | sucC | 1547950..1549116 (-) | 1167 | WP_037564702.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| MUA43_RS07530 (MUA43_07515) | - | 1549328..1549597 (-) | 270 | WP_037564707.1 | hypothetical protein | - |
| MUA43_RS07535 (MUA43_07520) | - | 1549684..1550460 (-) | 777 | WP_145052003.1 | ribonuclease HII | - |
| MUA43_RS07540 (MUA43_07525) | ylqF | 1550450..1551331 (-) | 882 | WP_060552473.1 | ribosome biogenesis GTPase YlqF | - |
| MUA43_RS07545 (MUA43_07530) | - | 1551560..1551922 (+) | 363 | WP_105995858.1 | GtrA family protein | - |
| MUA43_RS07550 (MUA43_07535) | - | 1551950..1554544 (+) | 2595 | WP_394371706.1 | YfhO family protein | - |
| MUA43_RS07555 (MUA43_07540) | - | 1554541..1557135 (+) | 2595 | WP_262608209.1 | YfhO family protein | - |
| MUA43_RS07560 (MUA43_07545) | - | 1557208..1558194 (-) | 987 | WP_262608210.1 | prealbumin-like fold domain-containing protein | - |
| MUA43_RS12230 | - | 1558258..1558581 (-) | 324 | Protein_1456 | collagen binding domain-containing protein | - |
| MUA43_RS07565 (MUA43_07550) | - | 1558560..1559144 (-) | 585 | WP_107368505.1 | Ig-like domain-containing protein | - |
| MUA43_RS07570 (MUA43_07555) | - | 1559285..1559968 (-) | 684 | WP_107368506.1 | phosphatase PAP2 family protein | - |
| MUA43_RS07575 (MUA43_07560) | rplS | 1560253..1560603 (-) | 351 | WP_037564712.1 | 50S ribosomal protein L19 | - |
| MUA43_RS07580 (MUA43_07565) | trmD | 1560708..1561442 (-) | 735 | WP_060550894.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| MUA43_RS07585 (MUA43_07570) | rimM | 1561439..1561942 (-) | 504 | WP_262608214.1 | ribosome maturation factor RimM | - |
| MUA43_RS07590 (MUA43_07575) | rpsP | 1562047..1562322 (-) | 276 | WP_037564718.1 | 30S ribosomal protein S16 | - |
| MUA43_RS07595 (MUA43_07580) | ffh | 1562547..1563914 (-) | 1368 | WP_103346153.1 | signal recognition particle protein | - |
| MUA43_RS07600 (MUA43_07585) | - | 1563928..1564260 (-) | 333 | WP_037564722.1 | putative DNA-binding protein | - |
| MUA43_RS07605 (MUA43_07590) | ftsY | 1564247..1565578 (-) | 1332 | WP_060550891.1 | signal recognition particle-docking protein FtsY | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 37821.80 Da Isoelectric Point: 5.3338
>NTDB_id=673082 MUA43_RS07320 WP_060550930.1 1499905..1500948(-) (recA) [Staphylococcus agnetis strain IVB6186]
MDNERQKALDTVIKNMEKSFGKGAVMKLGENKDRRVSSVSSGSVTLDHALGVGGYPKGRIIEVYGPESSGKTTVALHAIA
EVQKNGGVAAFIDAEHALDPVYAQALGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIIIVDSVAALTPKAEIEGEMGD
THVGLQARLMSQALRKLSAAISKSNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQDIVGNR
TKIKVVKNKVAPPFKVAEVDIMYGQGISRQGELIDLGVQHDIVDKSGAWYSYNGERMGQGKENVKLFLKEHPDLENEIDR
KLREKLGIFDGDVEESEQESAQTLFDE
MDNERQKALDTVIKNMEKSFGKGAVMKLGENKDRRVSSVSSGSVTLDHALGVGGYPKGRIIEVYGPESSGKTTVALHAIA
EVQKNGGVAAFIDAEHALDPVYAQALGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIIIVDSVAALTPKAEIEGEMGD
THVGLQARLMSQALRKLSAAISKSNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQDIVGNR
TKIKVVKNKVAPPFKVAEVDIMYGQGISRQGELIDLGVQHDIVDKSGAWYSYNGERMGQGKENVKLFLKEHPDLENEIDR
KLREKLGIFDGDVEESEQESAQTLFDE
Nucleotide
Download Length: 1044 bp
>NTDB_id=673082 MUA43_RS07320 WP_060550930.1 1499905..1500948(-) (recA) [Staphylococcus agnetis strain IVB6186]
TTGGATAATGAACGTCAAAAAGCACTCGATACAGTAATTAAAAATATGGAAAAATCTTTTGGGAAAGGTGCCGTTATGAA
ACTTGGCGAAAATAAAGATCGTCGTGTTTCTAGTGTTTCTAGTGGTTCTGTAACATTAGATCATGCATTAGGTGTAGGTG
GCTATCCTAAAGGCCGTATTATAGAAGTTTATGGACCTGAAAGCTCAGGTAAAACTACCGTAGCCCTACATGCCATTGCA
GAAGTACAAAAAAATGGTGGCGTGGCTGCATTTATTGACGCAGAACATGCGCTTGATCCTGTTTATGCACAAGCTTTAGG
TGTAGATATTGATAACTTATATTTATCGCAACCGGACCATGGTGAGCAAGGCCTTGAAATTGCTGAGGCGTTCGTTCGTA
GTGGCGCGGTCGACATTATTATCGTAGACTCAGTTGCTGCGTTAACACCGAAAGCTGAAATTGAAGGTGAGATGGGCGAT
ACGCATGTCGGTTTACAAGCACGTCTAATGTCTCAAGCACTACGTAAATTATCGGCAGCAATTTCTAAATCAAATACGAC
TGCCATTTTTATTAACCAAATTCGTGAGAAAGTGGGGGTTATGTTTGGTAACCCTGAAACAACACCAGGTGGTCGGGCAT
TAAAATTCTACAGTTCTGTTCGTTTAGAAGTACGTCGTGCGGAACAATTAAAACAAGGGCAAGATATTGTCGGTAACCGT
ACGAAAATCAAAGTGGTTAAAAATAAAGTTGCTCCACCATTTAAAGTAGCTGAAGTCGATATCATGTATGGTCAAGGTAT
TTCTCGACAAGGTGAACTGATTGACCTTGGTGTACAACATGATATTGTAGACAAGTCTGGAGCTTGGTATTCATATAATG
GTGAACGTATGGGTCAAGGTAAAGAAAACGTGAAGTTATTCTTAAAAGAACATCCTGACTTAGAAAATGAAATTGACCGT
AAACTCCGTGAAAAATTAGGTATTTTCGATGGAGATGTTGAAGAAAGTGAGCAAGAGTCAGCTCAAACTTTATTTGATGA
ATAA
TTGGATAATGAACGTCAAAAAGCACTCGATACAGTAATTAAAAATATGGAAAAATCTTTTGGGAAAGGTGCCGTTATGAA
ACTTGGCGAAAATAAAGATCGTCGTGTTTCTAGTGTTTCTAGTGGTTCTGTAACATTAGATCATGCATTAGGTGTAGGTG
GCTATCCTAAAGGCCGTATTATAGAAGTTTATGGACCTGAAAGCTCAGGTAAAACTACCGTAGCCCTACATGCCATTGCA
GAAGTACAAAAAAATGGTGGCGTGGCTGCATTTATTGACGCAGAACATGCGCTTGATCCTGTTTATGCACAAGCTTTAGG
TGTAGATATTGATAACTTATATTTATCGCAACCGGACCATGGTGAGCAAGGCCTTGAAATTGCTGAGGCGTTCGTTCGTA
GTGGCGCGGTCGACATTATTATCGTAGACTCAGTTGCTGCGTTAACACCGAAAGCTGAAATTGAAGGTGAGATGGGCGAT
ACGCATGTCGGTTTACAAGCACGTCTAATGTCTCAAGCACTACGTAAATTATCGGCAGCAATTTCTAAATCAAATACGAC
TGCCATTTTTATTAACCAAATTCGTGAGAAAGTGGGGGTTATGTTTGGTAACCCTGAAACAACACCAGGTGGTCGGGCAT
TAAAATTCTACAGTTCTGTTCGTTTAGAAGTACGTCGTGCGGAACAATTAAAACAAGGGCAAGATATTGTCGGTAACCGT
ACGAAAATCAAAGTGGTTAAAAATAAAGTTGCTCCACCATTTAAAGTAGCTGAAGTCGATATCATGTATGGTCAAGGTAT
TTCTCGACAAGGTGAACTGATTGACCTTGGTGTACAACATGATATTGTAGACAAGTCTGGAGCTTGGTATTCATATAATG
GTGAACGTATGGGTCAAGGTAAAGAAAACGTGAAGTTATTCTTAAAAGAACATCCTGACTTAGAAAATGAAATTGACCGT
AAACTCCGTGAAAAATTAGGTATTTTCGATGGAGATGTTGAAGAAAGTGAGCAAGAGTCAGCTCAAACTTTATTTGATGA
ATAA
Similar proteins
Only experimentally validated proteins are listed.