Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   SCSC_RS08895 Genome accession   NZ_AP014647
Coordinates   1798380..1799525 (-) Length   381 a.a.
NCBI ID   WP_006269775.1    Uniprot ID   A0AAD2Y463
Organism   Streptococcus constellatus subsp. constellatus strain CCUG 24889     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1793380..1804525
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SCSC_RS08860 (SCSC_1826) - 1794381..1794692 (-) 312 WP_003027765.1 DUF1292 domain-containing protein -
  SCSC_RS08865 (SCSC_1827) ruvX 1794709..1795128 (-) 420 WP_006270506.1 Holliday junction resolvase RuvX -
  SCSC_RS08870 (SCSC_1828) - 1795128..1795394 (-) 267 WP_009569646.1 IreB family regulatory phosphoprotein -
  SCSC_RS08875 (SCSC_1829) - 1795518..1796075 (-) 558 WP_003071476.1 SP0191 family lipoprotein -
  SCSC_RS08880 (SCSC_1830) - 1796180..1796722 (-) 543 WP_037566125.1 SP0191 family lipoprotein -
  SCSC_RS08885 (SCSC_1831) - 1796754..1797689 (-) 936 WP_006269888.1 IS30 family transposase -
  SCSC_RS08890 (SCSC_1832) spx 1797895..1798293 (-) 399 WP_003026638.1 transcriptional regulator Spx -
  SCSC_RS08895 (SCSC_1833) recA 1798380..1799525 (-) 1146 WP_006269775.1 recombinase RecA Machinery gene
  SCSC_RS08900 (SCSC_1834) cinA 1799574..1800842 (-) 1269 WP_006269781.1 competence/damage-inducible protein A Machinery gene
  SCSC_RS08905 (SCSC_1835) - 1800998..1801627 (-) 630 WP_006269784.1 ABC transporter ATP-binding protein -
  SCSC_RS08910 (SCSC_1836) - 1801624..1803633 (-) 2010 WP_006269786.1 hypothetical protein -
  SCSC_RS08915 (SCSC_1837) - 1803731..1804069 (-) 339 WP_006269785.1 hypothetical protein -

Sequence

Protein


Download         Length: 381 a.a.        Molecular weight: 41307.98 Da        Isoelectric Point: 4.9895

>NTDB_id=66596 SCSC_RS08895 WP_006269775.1 1798380..1799525(-) (recA) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
MAKKQKKLEEISKKFGEERQKALDNALKNIEKDFGKGAIMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAQALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVIDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGIMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDEKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELIKIATDLDIIKKAGAWYSYNDEKIGQGSE
NAKKYLADHPEIFDEIDHKVRVHYGLIENDTEDEKNAEAIKSANKVEEVTLDLDDAIEIEE

Nucleotide


Download         Length: 1146 bp        

>NTDB_id=66596 SCSC_RS08895 WP_006269775.1 1798380..1799525(-) (recA) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
ATGGCGAAAAAACAAAAAAAATTAGAAGAAATTTCAAAGAAATTTGGTGAGGAACGTCAAAAAGCGTTAGATAATGCACT
TAAAAATATCGAAAAAGATTTTGGTAAAGGGGCGATTATGCGTTTGGGTGAGCGCGCTGAACAAAAAGTTCAAGTTATGA
GCTCAGGTAGCTTGGCGTTAGATATTGCACTTGGTGCAGGAGGGTATCCAAAAGGTCGAATTATTGAAATCTATGGACCA
GAATCATCTGGTAAGACGACAGTGGCCCTCCATGCTGTTGCTCAGGCTCAGAAAGAAGGTGGAATTGCGGCCTTTATTGA
TGCTGAGCACGCTCTGGATCCGGCGTATGCGCAAGCTCTTGGGGTTAATATTGATGAATTACTCCTTTCTCAACCCGATT
CTGGTGAGCAAGGACTAGAAATTGCTGGGAAATTGATTGATTCTGGTGCAGTAGATTTGGTGGTCATCGACTCTGTGGCA
GCTCTTGTACCGCGTGCTGAAATTGATGGTGATATCGGAGATAGCCATGTTGGTTTGCAAGCGCGTATGATGAGTCAAGC
TATGCGTAAACTATCTGCTTCTATTAATAAAACGAAGACAATTGCGATTTTCATCAACCAACTACGCGAAAAAGTTGGTA
TTATGTTTGGAAATCCAGAAACAACACCGGGCGGTCGAGCTCTTAAATTTTATGCTTCTGTCCGTCTGGATGTCCGTGGC
AATACTCAAATCAAGGGAACTGGTGATGAAAAGGACACTAATGTCGGTAAGGAAACCAAAATTAAGGTTGTGAAAAACAA
GGTGGCTCCGCCATTTAAAGAAGCCTTTGTGGAAATCATGTATGGTGAAGGAATTTCCAAAACAGGTGAGCTCATCAAGA
TTGCAACAGATCTAGATATTATCAAAAAAGCGGGCGCGTGGTATTCTTACAATGATGAAAAGATTGGGCAAGGGTCTGAA
AATGCTAAGAAATACTTAGCAGATCATCCAGAAATTTTTGATGAAATTGATCACAAGGTTCGAGTTCACTATGGTTTGAT
TGAGAATGATACTGAAGATGAAAAAAATGCAGAAGCAATTAAATCAGCAAACAAAGTAGAGGAAGTGACTCTAGACTTAG
ACGATGCGATTGAGATTGAGGAATAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(21-286)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Streptococcus pneumoniae R6

88.083

100

0.892
  recA Streptococcus pneumoniae TIGR4

88.083

100

0.892
  recA Streptococcus pneumoniae Rx1

88.083

100

0.892
  recA Streptococcus pneumoniae D39

88.083

100

0.892
  recA Streptococcus mitis NCTC 12261

88.976

100

0.89
  recA Streptococcus mitis SK321

88.189

100

0.882
  recA Streptococcus mutans UA159

86.423

100

0.869
  recA Streptococcus pyogenes NZ131

86.089

100

0.861
  recA Lactococcus lactis subsp. cremoris KW2

77.874

91.339

0.711
  recA Latilactobacillus sakei subsp. sakei 23K

68.713

89.764

0.617
  recA Bacillus subtilis subsp. subtilis str. 168

69.578

87.139

0.606
  recA Neisseria gonorrhoeae strain FA1090

60.694

90.814

0.551
  recA Neisseria gonorrhoeae MS11

60.694

90.814

0.551
  recA Neisseria gonorrhoeae MS11

60.694

90.814

0.551
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

63.272

85.039

0.538
  recA Vibrio cholerae O1 biovar El Tor strain E7946

62.769

85.302

0.535
  recA Vibrio cholerae strain A1552

62.769

85.302

0.535
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

61.094

86.352

0.528
  recA Acinetobacter baumannii D1279779

61.538

85.302

0.525
  recA Glaesserella parasuis strain SC1401

61.231

85.302

0.522
  recA Acinetobacter baylyi ADP1

60.615

85.302

0.517
  recA Pseudomonas stutzeri DSM 10701

56.034

91.339

0.512
  recA Helicobacter pylori strain NCTC11637

58.485

86.614

0.507
  recA Helicobacter pylori 26695

58.485

86.614

0.507
  recA Ralstonia pseudosolanacearum GMI1000

60.883

83.202

0.507
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

58.006

86.877

0.504

Multiple sequence alignment