Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   OXB_RS10745 Genome accession   NZ_AP013294
Coordinates   2199846..2200910 (+) Length   354 a.a.
NCBI ID   WP_041074188.1    Uniprot ID   A0A0A8JII9
Organism   Bacillus sp. OxB-1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2194846..2205910
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OXB_RS10720 (OXB_2112) - 2195224..2195955 (+) 732 WP_041074178.1 SDR family oxidoreductase -
  OXB_RS10725 (OXB_2113) - 2196064..2196864 (+) 801 WP_041074180.1 DUF3388 domain-containing protein -
  OXB_RS10730 (OXB_2114) - 2196883..2197761 (+) 879 WP_144399684.1 helix-turn-helix domain-containing protein -
  OXB_RS10735 (OXB_2115) pgsA 2197824..2198402 (+) 579 WP_041074184.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  OXB_RS10740 (OXB_2116) cinA 2198421..2199680 (+) 1260 WP_041074186.1 competence/damage-inducible protein A Machinery gene
  OXB_RS10745 (OXB_2117) recA 2199846..2200910 (+) 1065 WP_041074188.1 recombinase RecA Machinery gene
  OXB_RS10750 (OXB_2118) rny 2201238..2202794 (+) 1557 WP_041074191.1 ribonuclease Y -
  OXB_RS10755 (OXB_2119) - 2202856..2203653 (+) 798 WP_041076639.1 TIGR00282 family metallophosphoesterase -
  OXB_RS10760 (OXB_2120) - 2203741..2204007 (+) 267 WP_144399685.1 stage V sporulation protein S -
  OXB_RS10765 (OXB_2121) miaB 2204242..2205786 (+) 1545 WP_041074195.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 354 a.a.        Molecular weight: 38277.29 Da        Isoelectric Point: 4.5714

>NTDB_id=65595 OXB_RS10745 WP_041074188.1 2199846..2200910(+) (recA) [Bacillus sp. OxB-1]
MSDRKAALDMALKQIEKQFGKGSVMKMGEQTDREISTSSSGSLALDAALGVGGYPRGRVIEIYGPESSGKTTVALHAIAE
VQAAGGQAAFIDAEHALDPVYAQKLGVDIDELLLSQPDTGEQALEIAEALVRSGAIDIIVIDSVAALVPKAEIEGEMGDS
HVGLQARLMSQALRKLSGAINKSKTIAVFINQIREKVGVMFGNPEVTPGGRALKFYSSVRLDVRRGEAIKQGNDIMGNKT
RIRVVKNKVAPPFRTAEVDIMYGEGISKEGEIVDLGAELDVVQKSGSWYSYEGERLGQGRENAKQFLKENPEIRNEIANK
IRDSYGMASANYVIAAHEEDEDEDEVLELLLDEE

Nucleotide


Download         Length: 1065 bp        

>NTDB_id=65595 OXB_RS10745 WP_041074188.1 2199846..2200910(+) (recA) [Bacillus sp. OxB-1]
TTGAGCGATCGTAAAGCGGCTTTGGATATGGCCTTGAAACAAATAGAAAAACAATTCGGGAAAGGTTCCGTCATGAAAAT
GGGAGAACAGACGGACCGTGAAATTTCCACATCATCGAGTGGCTCGCTTGCACTCGACGCCGCTCTTGGAGTCGGCGGCT
ACCCGCGCGGCCGGGTAATCGAAATCTATGGCCCGGAAAGTTCGGGTAAAACGACTGTCGCGCTCCATGCCATTGCAGAA
GTGCAGGCGGCAGGCGGACAGGCGGCCTTCATCGATGCGGAGCATGCGCTCGATCCGGTCTATGCGCAAAAGTTGGGCGT
CGATATCGACGAATTGCTATTATCCCAGCCGGATACGGGAGAGCAGGCGCTGGAAATCGCAGAAGCGCTCGTTCGAAGCG
GTGCAATCGACATCATCGTCATAGACTCGGTGGCGGCGCTCGTCCCGAAAGCGGAAATCGAAGGAGAGATGGGGGATTCC
CACGTAGGCCTTCAAGCCCGTCTCATGTCCCAAGCATTGCGTAAACTTTCCGGAGCGATCAATAAGTCGAAAACTATCGC
AGTATTCATCAACCAAATCCGTGAAAAAGTCGGTGTCATGTTCGGTAATCCGGAAGTGACACCGGGAGGTCGTGCCTTGA
AATTCTATTCCTCCGTGCGATTGGATGTCCGCCGCGGAGAAGCGATTAAGCAAGGTAACGATATCATGGGGAACAAAACG
CGGATCCGCGTCGTGAAAAACAAAGTCGCGCCACCATTCCGCACAGCGGAAGTCGATATCATGTACGGGGAAGGGATCTC
CAAGGAAGGGGAAATCGTCGACCTCGGTGCCGAATTGGATGTCGTCCAAAAAAGCGGTTCCTGGTATTCCTACGAAGGCG
AACGCCTTGGACAAGGCCGCGAGAACGCGAAACAATTCCTCAAGGAAAATCCGGAGATCCGCAACGAAATCGCCAATAAG
ATCCGTGATTCATACGGAATGGCCAGTGCCAACTATGTCATCGCCGCCCATGAAGAGGACGAAGACGAGGACGAAGTGCT
GGAACTATTGCTGGACGAAGAATGA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(7-267)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A8JII9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Bacillus subtilis subsp. subtilis str. 168

86.544

92.373

0.799
  recA Latilactobacillus sakei subsp. sakei 23K

70.822

99.718

0.706
  recA Streptococcus mutans UA159

64.167

100

0.653
  recA Streptococcus pyogenes NZ131

63.842

100

0.638
  recA Streptococcus pneumoniae R6

62.745

100

0.633
  recA Streptococcus pneumoniae Rx1

62.745

100

0.633
  recA Streptococcus pneumoniae D39

62.745

100

0.633
  recA Streptococcus pneumoniae TIGR4

62.745

100

0.633
  recA Neisseria gonorrhoeae MS11

67.593

91.525

0.619
  recA Neisseria gonorrhoeae MS11

67.593

91.525

0.619
  recA Neisseria gonorrhoeae strain FA1090

67.593

91.525

0.619
  recA Streptococcus mitis NCTC 12261

66.364

93.22

0.619
  recA Streptococcus mitis SK321

66.061

93.22

0.616
  recA Ralstonia pseudosolanacearum GMI1000

66.159

92.655

0.613
  recA Acinetobacter baylyi ADP1

61.891

98.588

0.61
  recA Lactococcus lactis subsp. cremoris KW2

64.545

93.22

0.602
  recA Pseudomonas stutzeri DSM 10701

62.13

95.48

0.593
  recA Acinetobacter baumannii D1279779

60.58

97.458

0.59
  recA Glaesserella parasuis strain SC1401

59.544

99.153

0.59
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

60.35

96.893

0.585
  recA Vibrio cholerae strain A1552

63.863

90.678

0.579
  recA Vibrio cholerae O1 biovar El Tor strain E7946

63.863

90.678

0.579
  recA Helicobacter pylori strain NCTC11637

62.462

91.808

0.573
  recA Helicobacter pylori 26695

62.154

91.808

0.571
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

61.468

92.373

0.568
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

60.625

90.395

0.548

Multiple sequence alignment