Detailed information    

insolico Bioinformatically predicted

Overview


Name   recA   Type   Machinery gene
Locus tag   ANG_RS01230 Genome accession   NZ_AP013072
Coordinates   232213..233361 (+) Length   382 a.a.
NCBI ID   WP_038677164.1    Uniprot ID   -
Organism   Streptococcus anginosus subsp. whileyi MAS624     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 227213..238361
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ANG_RS01205 - 228171..228509 (-) 339 WP_003038373.1 hypothetical protein -
  ANG_RS01210 (ANG_0220) ruvA 228608..229198 (+) 591 WP_003038332.1 Holliday junction branch migration protein RuvA -
  ANG_RS01215 (ANG_0221) - 229209..229781 (+) 573 WP_003038379.1 DNA-3-methyladenine glycosylase I -
  ANG_RS01220 - 229890..230303 (-) 414 Protein_220 EamA family transporter -
  ANG_RS01225 (ANG_0223) cinA 230901..232169 (+) 1269 WP_003038347.1 competence/damage-inducible protein A Machinery gene
  ANG_RS01230 (ANG_0224) recA 232213..233361 (+) 1149 WP_038677164.1 recombinase RecA Machinery gene
  ANG_RS01235 (ANG_0225) spx 233448..233846 (+) 399 WP_003026638.1 transcriptional regulator Spx -
  ANG_RS01240 (ANG_0226) - 233984..234433 (+) 450 WP_269446318.1 SP0191 family lipoprotein -
  ANG_RS01245 (ANG_0227) - 234537..235028 (+) 492 WP_025271567.1 SP0191 family lipoprotein -
  ANG_RS01250 (ANG_0228) - 235309..235575 (+) 267 WP_009569646.1 IreB family regulatory phosphoprotein -
  ANG_RS01255 (ANG_0229) ruvX 235575..235994 (+) 420 WP_003038407.1 Holliday junction resolvase RuvX -
  ANG_RS01260 (ANG_0230) - 236012..236323 (+) 312 WP_003027765.1 DUF1292 domain-containing protein -
  ANG_RS01265 (ANG_0231) - 236523..237755 (+) 1233 WP_003038358.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -
  ANG_RS01270 (ANG_0232) - 237803..238240 (+) 438 WP_003038389.1 SP_0198 family lipoprotein -

Sequence


Protein


Download         Length: 382 a.a.        Molecular weight: 41327.88 Da        Isoelectric Point: 4.8122

>NTDB_id=65500 ANG_RS01230 WP_038677164.1 232213..233361(+) (recA) [Streptococcus anginosus subsp. whileyi MAS624]
MNGEKTKKIEEISKKFGEERQKALDTALKNIEKDFGKGAIMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYG
PESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAQALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVIDSV
AALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGIMFGNPETTPGGRALKFYASVRLDVR
GNTQIKGTGDEKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELIKIATDLDIIKKAGAWYSYNDEKIGQGS
ENAKKYLADHPEIFDEIDHKVRVHYGLIEDDAEDEKNAEATKSANKVEEVTLDLDDAIEIEE

Nucleotide


Download         Length: 1149 bp        

>NTDB_id=65500 ANG_RS01230 WP_038677164.1 232213..233361(+) (recA) [Streptococcus anginosus subsp. whileyi MAS624]
ATAAATGGCGAAAAAACAAAAAAAATAGAAGAAATTTCAAAGAAATTTGGCGAGGAACGTCAAAAAGCGCTAGACACTGC
ACTTAAAAATATTGAAAAAGATTTTGGTAAAGGAGCGATTATGCGCCTAGGTGAGCGCGCTGAACAAAAAGTTCAAGTTA
TGAGTTCAGGTAGCTTGGCGCTAGATATCGCTCTTGGTGCAGGAGGGTATCCAAAGGGGCGGATTATTGAAATCTATGGA
CCAGAGTCTTCTGGTAAGACGACCGTAGCTCTTCATGCAGTAGCGCAAGCTCAAAAAGAAGGCGGTATTGCAGCTTTTAT
TGATGCAGAACACGCTCTGGACCCGGCTTATGCACAAGCCCTTGGAGTTAATATTGATGAACTCTTACTTTCTCAGCCAG
ACTCTGGTGAGCAAGGCCTTGAGATTGCTGGGAAATTGATTGACTCTGGTGCGGTAGATTTGGTAGTTATTGACTCCGTG
GCAGCCCTCGTACCGCGTGCTGAAATTGACGGAGATATTGGAGATAGTCACGTTGGTTTGCAAGCGCGGATGATGAGTCA
AGCTATGCGTAAATTGTCTGCTTCTATCAATAAAACGAAGACAATTGCGATTTTCATCAACCAATTGCGTGAAAAAGTTG
GTATTATGTTTGGAAATCCAGAAACAACACCTGGTGGTCGTGCCTTGAAATTCTATGCATCTGTTCGTTTGGATGTTCGC
GGAAATACCCAAATCAAGGGAACTGGTGATGAGAAAGATACCAATGTTGGTAAGGAAACCAAGATTAAGGTTGTGAAGAA
TAAGGTTGCTCCGCCATTCAAGGAAGCTTTCGTAGAAATCATGTATGGTGAAGGAATTTCTAAAACAGGCGAGTTGATTA
AAATTGCGACAGACCTTGATATTATCAAAAAAGCGGGTGCTTGGTATTCTTATAATGATGAAAAGATTGGTCAAGGGTCT
GAAAATGCTAAGAAATACTTGGCGGATCATCCAGAAATTTTTGATGAAATTGATCATAAAGTTCGAGTGCATTACGGTTT
GATTGAGGATGATGCTGAAGATGAAAAAAATGCAGAAGCAACTAAATCAGCAAACAAGGTGGAGGAAGTCACACTAGATT
TGGATGACGCAATTGAGATTGAGGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Streptococcus mitis NCTC 12261

88.947

99.476

0.885

  recA Streptococcus pneumoniae R6

87.467

100

0.877

  recA Streptococcus pneumoniae Rx1

87.467

100

0.877

  recA Streptococcus pneumoniae D39

87.467

100

0.877

  recA Streptococcus pneumoniae TIGR4

87.467

100

0.877

  recA Streptococcus mitis SK321

87.863

99.215

0.872

  recA Streptococcus mutans UA159

86.089

99.738

0.859

  recA Streptococcus pyogenes NZ131

85.752

99.215

0.851

  recA Lactococcus lactis subsp. cremoris KW2

77.493

91.885

0.712

  recA Latilactobacillus sakei subsp. sakei 23K

68.713

89.529

0.615

  recA Bacillus subtilis subsp. subtilis str. 168

69.909

86.126

0.602

  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

61.584

89.267

0.55

  recA Neisseria gonorrhoeae MS11

60.405

90.576

0.547

  recA Neisseria gonorrhoeae MS11

60.405

90.576

0.547

  recA Neisseria gonorrhoeae strain FA1090

60.405

90.576

0.547

  recA Vibrio cholerae O1 biovar El Tor strain E7946

62.769

85.079

0.534

  recA Vibrio cholerae strain A1552

62.769

85.079

0.534

  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

61.094

86.126

0.526

  recA Acinetobacter baumannii D1279779

61.538

85.079

0.524

  recA Glaesserella parasuis strain SC1401

61.231

85.079

0.521

  recA Acinetobacter baylyi ADP1

60.615

85.079

0.516

  recA Helicobacter pylori 26695

58.485

86.387

0.505

  recA Helicobacter pylori strain NCTC11637

58.485

86.387

0.505

  recA Ralstonia pseudosolanacearum GMI1000

60.883

82.984

0.505

  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

58.006

86.649

0.503

  recA Pseudomonas stutzeri DSM 10701

58.769

85.079

0.5


Multiple sequence alignment