Detailed information NTG0065365

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: SUTH_RS17260
• Genome accession: NZ_AP012547
• Coordinates: 3641597..3642619 (+)
• Length: 340 a.a.
• NCBI ID: WP_041101021.1
• Uniprot ID: W0SJE0
• Organism: Sulfuritalea hydrogenivorans sk43H strain DSM 22779
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3636597..3647619

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SUTH_RS17225 (SUTH_03460)	-	3636925..3637521 (+)	597	WP_041101012.1	riboflavin synthase	-
SUTH_RS17230 (SUTH_03461)	ribBA	3637555..3638661 (+)	1107	WP_041101014.1	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	-
SUTH_RS17235 (SUTH_03462)	ribH	3638664..3639116 (+)	453	WP_041102551.1	6,7-dimethyl-8-ribityllumazine synthase	-
SUTH_RS17240 (SUTH_03463)	nusB	3639116..3639550 (+)	435	WP_041101016.1	transcription antitermination factor NusB	-
SUTH_RS17245 (SUTH_03464)	thiL	3639567..3640529 (+)	963	WP_041101017.1	thiamine-phosphate kinase	-
SUTH_RS17250 (SUTH_03465)	-	3640540..3641037 (+)	498	WP_231851063.1	phosphatidylglycerophosphatase A	-
SUTH_RS17255 (SUTH_03466)	-	3641037..3641528 (+)	492	WP_041101019.1	CinA family protein	-
SUTH_RS17260 (SUTH_03467)	recA	3641597..3642619 (+)	1023	WP_041101021.1	recombinase RecA	Machinery gene
SUTH_RS17265 (SUTH_03468)	-	3642627..3643073 (+)	447	WP_041101024.1	regulatory protein RecX	-
SUTH_RS17270 (SUTH_03469)	lptB	3643186..3643923 (+)	738	WP_041101026.1	LPS export ABC transporter ATP-binding protein	-
SUTH_RS17275 (SUTH_03470)	rpoN/rpoN1	3643942..3645393 (+)	1452	WP_041101028.1	RNA polymerase factor sigma-54	Machinery gene
SUTH_RS17280 (SUTH_03471)	hpf	3645420..3645734 (+)	315	WP_041101030.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
SUTH_RS17285 (SUTH_03472)	ptsN	3645878..3646336 (+)	459	WP_041101032.1	PTS IIA-like nitrogen regulatory protein PtsN	-
SUTH_RS17290 (SUTH_03473)	hprK	3646321..3647274 (+)	954	WP_041101034.1	HPr(Ser) kinase/phosphatase	-

Sequence

Protein

• Length: 340 a.a.
• Molecular weight: 36308.64 Da
• Isoelectric Point: 5.8233

>NTDB_id=65365 SUTH_RS17260 WP_041101021.1 3641597..3642619(+) (recA) [Sulfuritalea hydrogenivorans sk43H strain DSM 22779]
MDDNKSKALQAALAQIEKQFGKGSIMKMGEGLATDDIQTVSTGSLGLDIALGIGGLPRGRVVEVYGPESSGKTTLCLHVV
AEIQKAGGVAAYIDAENALDPGYAAKLGVNVPDLLISQPDTGEQGLEITDMLVRSGGVDLIVIDSVAALTPRAEIEGEMG
DQLPGLQARLMSQALRKLTANIKRTNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRMDIRRTGAIKKGDEVIGN
ETKVKVVKNKVAPPFREAHFDILYGEGISRQGEIVELGVEHKIVEKSGAWYAYKGEKIGQGKDNAREFLREHADIAVEIE
NRVREAVGVAALGKPATSAE

Nucleotide

• Length: 1023 bp

>NTDB_id=65365 SUTH_RS17260 WP_041101021.1 3641597..3642619(+) (recA) [Sulfuritalea hydrogenivorans sk43H strain DSM 22779]
ATGGACGACAACAAGAGCAAGGCACTCCAGGCCGCCCTGGCCCAGATCGAAAAGCAGTTCGGCAAGGGCTCCATCATGAA
AATGGGCGAAGGTCTCGCCACCGACGACATCCAGACCGTTTCCACCGGCTCGCTCGGGCTCGATATCGCCTTGGGCATAG
GCGGCCTGCCGCGCGGCCGGGTGGTCGAGGTCTATGGACCGGAATCTTCCGGCAAGACCACCCTGTGCCTGCACGTCGTC
GCCGAGATCCAGAAGGCCGGCGGCGTCGCCGCCTACATCGATGCAGAAAACGCGCTCGACCCCGGCTATGCCGCCAAGCT
CGGCGTCAACGTGCCTGACCTGTTGATCTCGCAGCCCGACACCGGTGAACAGGGCCTGGAAATCACCGACATGCTGGTGC
GCTCCGGCGGCGTCGACCTGATCGTGATCGACTCGGTCGCCGCGCTGACGCCGCGCGCCGAAATCGAGGGCGAAATGGGC
GACCAGTTGCCCGGCCTGCAGGCGCGGCTGATGTCGCAGGCGCTGCGCAAGCTCACCGCCAACATCAAGCGCACCAACAC
GCTGGTGATCTTCATCAACCAGATCCGCATGAAGATCGGCGTCATGTTCGGCAACCCCGAGACCACCACCGGCGGCAACG
CGCTCAAGTTCTACGCCTCGGTGCGCATGGACATCCGCCGCACCGGCGCCATCAAGAAGGGCGACGAAGTCATCGGCAAC
GAGACCAAGGTCAAGGTGGTCAAGAACAAGGTCGCGCCGCCCTTCCGCGAGGCCCATTTCGACATCCTCTACGGCGAGGG
CATTTCGCGTCAGGGTGAAATCGTCGAACTCGGCGTCGAGCACAAGATCGTCGAAAAATCCGGCGCCTGGTATGCCTACA
AGGGCGAGAAGATCGGCCAGGGCAAGGACAACGCACGCGAATTCCTGCGCGAGCATGCCGACATCGCGGTGGAGATCGAG
AACCGCGTGCGCGAGGCCGTCGGCGTCGCCGCGCTGGGCAAACCGGCTACCTCTGCGGAGTAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-269)

3D structure

• AlphaFold DB: W0SJE0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	80.503	93.529	0.753
recA	Pseudomonas stutzeri DSM 10701	71.217	99.118	0.706
recA	Neisseria gonorrhoeae MS11	70.821	96.765	0.685
recA	Neisseria gonorrhoeae MS11	70.821	96.765	0.685
recA	Neisseria gonorrhoeae strain FA1090	70.821	96.765	0.685
recA	Acinetobacter baylyi ADP1	68.529	100	0.685
recA	Glaesserella parasuis strain SC1401	70.154	95.588	0.671
recA	Vibrio cholerae strain A1552	69.231	95.588	0.662
recA	Vibrio cholerae O1 biovar El Tor strain E7946	69.231	95.588	0.662
recA	Acinetobacter baumannii D1279779	68.807	96.176	0.662
recA	Bacillus subtilis subsp. subtilis str. 168	65.337	95.882	0.626
recA	Latilactobacillus sakei subsp. sakei 23K	64.634	96.471	0.624
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.763	97.941	0.615
recA	Streptococcus pneumoniae Rx1	62.31	96.765	0.603
recA	Streptococcus pneumoniae R6	62.31	96.765	0.603
recA	Streptococcus pneumoniae D39	62.31	96.765	0.603
recA	Streptococcus pneumoniae TIGR4	62.31	96.765	0.603
recA	Helicobacter pylori strain NCTC11637	62.006	96.765	0.6
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.631	97.353	0.6
recA	Helicobacter pylori 26695	61.702	96.765	0.597
recA	Lactococcus lactis subsp. cremoris KW2	61.702	96.765	0.597
recA	Streptococcus mutans UA159	61.329	97.353	0.597
recA	Streptococcus pyogenes NZ131	61.212	97.059	0.594
recA	Streptococcus mitis NCTC 12261	61.398	96.765	0.594
recA	Streptococcus mitis SK321	61.094	96.765	0.591
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.877	95.294	0.571