Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | LK443_RS06615 | Genome accession | NZ_CP085953 |
| Coordinates | 1323663..1324718 (+) | Length | 351 a.a. |
| NCBI ID | WP_227931153.1 | Uniprot ID | - |
| Organism | Granulicatella elegans strain FDAARGOS_1559 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1318663..1329718
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LK443_RS06575 (LK443_06575) | comYC | 1318729..1319025 (+) | 297 | WP_227931145.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| LK443_RS06580 (LK443_06580) | comGD | 1319048..1319494 (+) | 447 | WP_227931146.1 | competence type IV pilus minor pilin ComGD | - |
| LK443_RS06585 (LK443_06585) | - | 1319472..1319867 (+) | 396 | WP_227931147.1 | hypothetical protein | - |
| LK443_RS06590 (LK443_06590) | - | 1319875..1320384 (+) | 510 | WP_227931148.1 | hypothetical protein | - |
| LK443_RS06595 (LK443_06595) | - | 1320344..1320733 (+) | 390 | WP_227931149.1 | hypothetical protein | - |
| LK443_RS06600 (LK443_06600) | - | 1320799..1321680 (+) | 882 | WP_227931150.1 | helix-turn-helix domain-containing protein | - |
| LK443_RS06605 (LK443_06605) | pgsA | 1321691..1322278 (+) | 588 | WP_227931151.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| LK443_RS06610 (LK443_06610) | - | 1322338..1323579 (+) | 1242 | WP_227931152.1 | competence/damage-inducible protein A | - |
| LK443_RS06615 (LK443_06615) | recA | 1323663..1324718 (+) | 1056 | WP_227931153.1 | recombinase RecA | Machinery gene |
| LK443_RS06620 (LK443_06620) | - | 1324917..1325606 (+) | 690 | WP_227931154.1 | response regulator transcription factor | - |
| LK443_RS06625 (LK443_06625) | - | 1325627..1327087 (+) | 1461 | WP_227931155.1 | ATP-binding protein | - |
| LK443_RS06630 (LK443_06630) | - | 1327092..1327685 (+) | 594 | WP_227931156.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| LK443_RS06635 (LK443_06635) | - | 1327657..1328355 (+) | 699 | WP_227931157.1 | rhomboid family intramembrane serine protease | - |
| LK443_RS06640 (LK443_06640) | - | 1328402..1329370 (+) | 969 | WP_227931158.1 | ROK family glucokinase | - |
Sequence
Protein
Download Length: 351 a.a. Molecular weight: 37821.11 Da Isoelectric Point: 5.3233
>NTDB_id=621622 LK443_RS06615 WP_227931153.1 1323663..1324718(+) (recA) [Granulicatella elegans strain FDAARGOS_1559]
MADQENRQRALDDALKKIEKSYGKGAVMKLGEKADSQVQTVSSGSLALDIALGAGGYPKGRIIEIFGPESSGKTTVALHA
VAEVQKRGGVAAFIDAEHALDPEYARALGVNIEELLLSQPDTGEQGLGIADALVASGAVDIVIVDSVAALVPRAEIEGDM
GQSHVGLQARLMSQALRKLSGTINRTKTIAIFINQLREKVGIMFGNPETTPGGRALKFYASIRLDVRRSDQIKNGTEILG
NHTKIKVVKNKVAPPFKIAEVDIMYGEGISQIGEILDMASGLDFVKKSGAWYAYNDEKIGQGRENAKKYLMEHPEIVEVL
TQKIRAHYNIGGEVLSQEAEDLGQTNLLDEE
MADQENRQRALDDALKKIEKSYGKGAVMKLGEKADSQVQTVSSGSLALDIALGAGGYPKGRIIEIFGPESSGKTTVALHA
VAEVQKRGGVAAFIDAEHALDPEYARALGVNIEELLLSQPDTGEQGLGIADALVASGAVDIVIVDSVAALVPRAEIEGDM
GQSHVGLQARLMSQALRKLSGTINRTKTIAIFINQLREKVGIMFGNPETTPGGRALKFYASIRLDVRRSDQIKNGTEILG
NHTKIKVVKNKVAPPFKIAEVDIMYGEGISQIGEILDMASGLDFVKKSGAWYAYNDEKIGQGRENAKKYLMEHPEIVEVL
TQKIRAHYNIGGEVLSQEAEDLGQTNLLDEE
Nucleotide
Download Length: 1056 bp
>NTDB_id=621622 LK443_RS06615 WP_227931153.1 1323663..1324718(+) (recA) [Granulicatella elegans strain FDAARGOS_1559]
ATGGCAGATCAAGAAAATCGTCAACGTGCATTAGATGATGCATTGAAAAAAATTGAAAAGAGTTATGGTAAAGGTGCAGT
AATGAAATTAGGAGAAAAAGCTGATTCGCAAGTTCAGACAGTTTCTTCAGGTTCATTAGCACTAGATATTGCATTAGGAG
CAGGTGGATACCCTAAAGGAAGAATTATTGAAATTTTTGGTCCTGAATCAAGTGGTAAAACAACGGTTGCTTTACATGCG
GTAGCAGAAGTACAAAAACGTGGTGGAGTAGCAGCATTTATCGATGCGGAACATGCTTTAGATCCAGAATATGCAAGAGC
ATTAGGCGTTAATATTGAAGAATTATTATTATCTCAACCAGATACTGGTGAACAAGGACTTGGAATTGCAGATGCATTAG
TGGCTTCAGGGGCAGTTGATATTGTAATTGTCGACTCAGTAGCTGCATTAGTACCACGTGCAGAAATTGAAGGAGATATG
GGACAATCTCATGTGGGGCTTCAAGCTCGTTTAATGTCTCAAGCGCTTCGTAAATTATCGGGGACAATTAATCGTACGAA
AACAATTGCAATCTTTATTAACCAATTACGTGAAAAAGTAGGAATTATGTTTGGTAATCCAGAAACAACTCCTGGTGGAC
GTGCATTAAAATTCTATGCAAGTATTCGTTTAGATGTTCGTCGTAGTGACCAAATTAAAAATGGAACAGAAATTTTAGGA
AATCACACTAAAATTAAAGTCGTGAAAAATAAAGTTGCGCCACCATTTAAAATAGCTGAAGTGGATATCATGTATGGAGA
AGGAATTTCTCAAATTGGAGAAATTTTAGATATGGCTTCTGGTTTAGATTTTGTGAAGAAGAGCGGTGCTTGGTATGCCT
ACAATGATGAAAAAATTGGCCAAGGCCGTGAAAATGCGAAGAAATACTTAATGGAACATCCAGAAATTGTTGAAGTATTA
ACACAGAAAATTCGTGCTCACTATAATATTGGTGGAGAAGTTCTTTCTCAAGAGGCAGAAGATTTAGGTCAAACAAATTT
ATTAGATGAAGAATAG
ATGGCAGATCAAGAAAATCGTCAACGTGCATTAGATGATGCATTGAAAAAAATTGAAAAGAGTTATGGTAAAGGTGCAGT
AATGAAATTAGGAGAAAAAGCTGATTCGCAAGTTCAGACAGTTTCTTCAGGTTCATTAGCACTAGATATTGCATTAGGAG
CAGGTGGATACCCTAAAGGAAGAATTATTGAAATTTTTGGTCCTGAATCAAGTGGTAAAACAACGGTTGCTTTACATGCG
GTAGCAGAAGTACAAAAACGTGGTGGAGTAGCAGCATTTATCGATGCGGAACATGCTTTAGATCCAGAATATGCAAGAGC
ATTAGGCGTTAATATTGAAGAATTATTATTATCTCAACCAGATACTGGTGAACAAGGACTTGGAATTGCAGATGCATTAG
TGGCTTCAGGGGCAGTTGATATTGTAATTGTCGACTCAGTAGCTGCATTAGTACCACGTGCAGAAATTGAAGGAGATATG
GGACAATCTCATGTGGGGCTTCAAGCTCGTTTAATGTCTCAAGCGCTTCGTAAATTATCGGGGACAATTAATCGTACGAA
AACAATTGCAATCTTTATTAACCAATTACGTGAAAAAGTAGGAATTATGTTTGGTAATCCAGAAACAACTCCTGGTGGAC
GTGCATTAAAATTCTATGCAAGTATTCGTTTAGATGTTCGTCGTAGTGACCAAATTAAAAATGGAACAGAAATTTTAGGA
AATCACACTAAAATTAAAGTCGTGAAAAATAAAGTTGCGCCACCATTTAAAATAGCTGAAGTGGATATCATGTATGGAGA
AGGAATTTCTCAAATTGGAGAAATTTTAGATATGGCTTCTGGTTTAGATTTTGTGAAGAAGAGCGGTGCTTGGTATGCCT
ACAATGATGAAAAAATTGGCCAAGGCCGTGAAAATGCGAAGAAATACTTAATGGAACATCCAGAAATTGTTGAAGTATTA
ACACAGAAAATTCGTGCTCACTATAATATTGGTGGAGAAGTTCTTTCTCAAGAGGCAGAAGATTTAGGTCAAACAAATTT
ATTAGATGAAGAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.