Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   NW979_RS06275 Genome accession   NZ_CP102959
Coordinates   1316300..1316923 (-) Length   207 a.a.
NCBI ID   WP_258413830.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 12-G-51     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1311300..1321923
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW979_RS06250 (NW979_06250) rpmG 1312876..1313025 (+) 150 WP_001265708.1 50S ribosomal protein L33 -
  NW979_RS06255 (NW979_06255) rpsN 1313479..1313748 (+) 270 WP_001085655.1 30S ribosomal protein S14 -
  NW979_RS06260 (NW979_06260) guaC 1313905..1314882 (+) 978 WP_000688126.1 GMP reductase -
  NW979_RS06270 (NW979_06270) - 1314904..1315920 (+) 1017 WP_289622739.1 CAP domain-containing protein -
  NW979_RS06275 (NW979_06275) dinR/lexA 1316300..1316923 (-) 624 WP_258413830.1 transcriptional repressor LexA Regulator
  NW979_RS06280 (NW979_06280) sosA 1317066..1317299 (+) 234 WP_000499647.1 DNA damage-induced cell division inhibitor SosA -
  NW979_RS06285 (NW979_06285) - 1317435..1317674 (+) 240 WP_000071351.1 DUF896 domain-containing protein -
  NW979_RS06290 (NW979_06290) recP/tkt 1317795..1319783 (+) 1989 WP_258413831.1 transketolase Machinery gene
  NW979_RS06295 (NW979_06295) - 1320061..1320303 (+) 243 WP_000246909.1 YneF family protein -
  NW979_RS06300 (NW979_06300) - 1320290..1320388 (+) 99 WP_001789897.1 hypothetical protein -
  NW979_RS06305 (NW979_06305) - 1320482..1320949 (+) 468 WP_000966142.1 CcdC family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23320.52 Da        Isoelectric Point: 4.8811

>NTDB_id=619622 NW979_RS06275 WP_258413830.1 1316300..1316923(-) (dinR/lexA) [Staphylococcus aureus strain 12-G-51]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTSDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVSVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=619622 NW979_RS06275 WP_258413830.1 1316300..1316923(-) (dinR/lexA) [Staphylococcus aureus strain 12-G-51]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCGACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAGTGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACC
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTTCTGTAATCGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(86-201)

LexA DNA binding domain (LexA_DNA_bind)

(1-65)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.829

99.034

0.662