Detailed information    

insolico Bioinformatically predicted

Overview


Name   recA   Type   Machinery gene
Locus tag   SANR_RS10370 Genome accession   NC_022239
Coordinates   2121351..2122496 (-) Length   381 a.a.
NCBI ID   WP_003038330.1    Uniprot ID   I0S7L6
Organism   Streptococcus anginosus C238     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2116351..2127496
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SANR_RS10330 (SANR_2007) - 2116471..2116908 (-) 438 WP_020999876.1 SP_0198 family lipoprotein -
  SANR_RS10335 (SANR_2008) - 2116956..2118188 (-) 1233 WP_003038358.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -
  SANR_RS10340 (SANR_2009) - 2118388..2118699 (-) 312 WP_003027765.1 DUF1292 domain-containing protein -
  SANR_RS10345 (SANR_2010) ruvX 2118717..2119136 (-) 420 WP_003038407.1 Holliday junction resolvase RuvX -
  SANR_RS10350 (SANR_2011) - 2119136..2119402 (-) 267 WP_009569646.1 IreB family regulatory phosphoprotein -
  SANR_RS10355 (SANR_2012) - 2119683..2120174 (-) 492 WP_025271567.1 SP0191 family lipoprotein -
  SANR_RS10360 (SANR_2013) - 2120278..2120730 (-) 453 WP_003038334.1 SP0191 family lipoprotein -
  SANR_RS12265 - 2120700..2120780 (-) 81 WP_229031567.1 lipoprotein -
  SANR_RS10365 (SANR_2014) spx 2120866..2121264 (-) 399 WP_003026638.1 transcriptional regulator Spx -
  SANR_RS10370 (SANR_2015) recA 2121351..2122496 (-) 1146 WP_003038330.1 recombinase RecA Machinery gene
  SANR_RS10375 (SANR_2016) cinA 2122544..2123812 (-) 1269 WP_003038347.1 competence/damage-inducible protein A Machinery gene
  SANR_RS10380 (SANR_2017) - 2124453..2124824 (+) 372 WP_020999878.1 EamA family transporter -
  SANR_RS10385 (SANR_2018) - 2124933..2125505 (-) 573 WP_003038379.1 DNA-3-methyladenine glycosylase I -
  SANR_RS10390 (SANR_2019) ruvA 2125516..2126106 (-) 591 WP_003038332.1 Holliday junction branch migration protein RuvA -
  SANR_RS10395 - 2126205..2126543 (+) 339 WP_003038373.1 hypothetical protein -

Sequence


Protein


Download         Length: 381 a.a.        Molecular weight: 41253.88 Da        Isoelectric Point: 4.9241

>NTDB_id=61694 SANR_RS10370 WP_003038330.1 2121351..2122496(-) (recA) [Streptococcus anginosus C238]
MAKKQKKIEEISKKFGEERQKALDTALKNIEKDFGKGAIMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAQALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVIDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGIMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDEKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELIKIATDLDIIKKAGAWYSYNDEKIGQGSE
NAKKYLADHPEIFDEIDHKVRVHYGLIEDDAEDEKNAEATKSANKVEEVTLDLDDAIEIEE

Nucleotide


Download         Length: 1146 bp        

>NTDB_id=61694 SANR_RS10370 WP_003038330.1 2121351..2122496(-) (recA) [Streptococcus anginosus C238]
ATGGCGAAAAAACAAAAAAAAATAGAAGAAATTTCAAAGAAATTTGGCGAGGAACGTCAAAAAGCGCTAGACACTGCACT
TAAAAATATTGAAAAAGATTTTGGTAAAGGAGCGATTATGCGCCTAGGTGAGCGCGCTGAACAAAAAGTTCAAGTTATGA
GTTCAGGTAGCTTGGCGCTAGATATCGCTCTTGGTGCAGGAGGGTATCCAAAGGGGCGGATTATTGAAATCTATGGACCA
GAGTCTTCTGGTAAGACGACCGTAGCTCTTCATGCAGTAGCGCAAGCTCAAAAAGAAGGCGGTATTGCAGCTTTTATTGA
TGCAGAACACGCTCTGGACCCGGCTTATGCACAAGCCCTTGGAGTTAATATTGATGAACTCTTACTTTCTCAGCCAGACT
CTGGTGAGCAAGGCCTTGAGATTGCTGGGAAATTGATTGACTCTGGTGCGGTAGATTTGGTAGTTATTGACTCCGTGGCA
GCCCTCGTACCGCGTGCTGAAATTGACGGAGATATTGGAGATAGTCACGTTGGTTTGCAAGCGCGGATGATGAGTCAAGC
TATGCGTAAATTGTCTGCTTCTATCAATAAAACGAAGACAATTGCGATTTTCATCAACCAATTGCGTGAAAAAGTTGGTA
TTATGTTTGGAAATCCAGAAACAACACCTGGTGGTCGTGCCTTGAAATTCTATGCATCTGTTCGTTTGGATGTTCGCGGA
AATACCCAAATCAAGGGAACTGGTGATGAGAAAGATACCAATGTTGGTAAGGAAACCAAGATTAAGGTTGTGAAGAATAA
GGTTGCTCCGCCATTCAAGGAAGCTTTCGTAGAAATCATGTATGGTGAAGGAATTTCTAAAACAGGCGAGTTGATTAAAA
TTGCGACAGACCTTGATATTATCAAAAAAGCGGGTGCTTGGTATTCTTATAATGATGAAAAGATTGGTCAAGGGTCTGAA
AATGCTAAGAAATACTTGGCGGATCATCCAGAAATTTTTGATGAAATTGATCATAAAGTTCGAGTGCATTACGGTTTGAT
TGAGGATGATGCTGAAGATGAAAAAAATGCAGAAGCAACTAAATCAGCAAACAAGGTGGAGGAAGTCACACTAGATTTGG
ATGACGCAATTGAGATTGAGGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB I0S7L6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Streptococcus mitis NCTC 12261

89.267

100

0.895

  recA Streptococcus pneumoniae Rx1

87.565

100

0.887

  recA Streptococcus pneumoniae R6

87.565

100

0.887

  recA Streptococcus pneumoniae TIGR4

87.565

100

0.887

  recA Streptococcus pneumoniae D39

87.565

100

0.887

  recA Streptococcus mitis SK321

88.189

100

0.882

  recA Streptococcus mutans UA159

86.423

100

0.869

  recA Streptococcus pyogenes NZ131

86.089

100

0.861

  recA Lactococcus lactis subsp. cremoris KW2

78.161

91.339

0.714

  recA Latilactobacillus sakei subsp. sakei 23K

66.022

95.013

0.627

  recA Bacillus subtilis subsp. subtilis str. 168

69.909

86.352

0.604

  recA Neisseria gonorrhoeae strain FA1090

60.405

90.814

0.549

  recA Neisseria gonorrhoeae MS11

60.405

90.814

0.549

  recA Neisseria gonorrhoeae MS11

60.405

90.814

0.549

  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

63.58

85.039

0.541

  recA Vibrio cholerae O1 biovar El Tor strain E7946

62.769

85.302

0.535

  recA Vibrio cholerae strain A1552

62.769

85.302

0.535

  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

61.094

86.352

0.528

  recA Acinetobacter baumannii D1279779

61.538

85.302

0.525

  recA Glaesserella parasuis strain SC1401

61.231

85.302

0.522

  recA Acinetobacter baylyi ADP1

60.615

85.302

0.517

  recA Helicobacter pylori strain NCTC11637

58.485

86.614

0.507

  recA Helicobacter pylori 26695

58.485

86.614

0.507

  recA Ralstonia pseudosolanacearum GMI1000

60.883

83.202

0.507

  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

58.006

86.877

0.504

  recA Pseudomonas stutzeri DSM 10701

58.769

85.302

0.501


Multiple sequence alignment