Detailed information NTG0055051

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: PCC7418_RS02195
• Genome accession: NC_019779
• Coordinates: 481412..482515 (-)
• Length: 367 a.a.
• NCBI ID: WP_015224539.1
• Uniprot ID: K9Y6W5
• Organism: Halothece sp. PCC 7418
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 476412..487515

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PCC7418_RS02180 (PCC7418_0427)	-	476519..477862 (-)	1344	WP_015224536.1	nucleotide sugar dehydrogenase	-
PCC7418_RS02185 (PCC7418_0428)	-	478066..480246 (-)	2181	WP_015224537.1	EAL domain-containing protein	-
PCC7418_RS02190 (PCC7418_0429)	-	480485..481366 (+)	882	WP_015224538.1	polysaccharide lyase	-
PCC7418_RS02195 (PCC7418_0430)	recA	481412..482515 (-)	1104	WP_015224539.1	recombinase RecA	Machinery gene
PCC7418_RS02200	-	482665..482817 (-)	153	WP_235620731.1	YciI family protein	-
PCC7418_RS19650	-	483120..483278 (-)	159	Protein_435	YciI family protein	-
PCC7418_RS02205 (PCC7418_0432)	pheT	483283..485727 (-)	2445	WP_015224540.1	phenylalanine--tRNA ligase subunit beta	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 39349.66 Da
• Isoelectric Point: 4.9789

>NTDB_id=55051 PCC7418_RS02195 WP_015224539.1 481412..482515(-) (recA) [Halothece sp. PCC 7418]
MASTSTMTNNPDKEKALNLVLNQIERNFGKGSIMRLGDAAQMKVETIPTGAHTLDIALGGGLPKGRIIEIYGPESSGKTT
LALHAIAEAQKAGGVAAFVDAEHALDPTYSDVLGVDIENLLVSQPDTGESALEIVDQLVRSAAVDIVVVDSVAALTPRAE
IEGEMGDTQVGLQARLMSKALRKIAGNIGRSGCTVIFLNQLRQKIGVTYGSPEVTTGGNALKFYCSVRLDIRRIQTLKKG
SEGEYGIRAKVKVAKNKVAPPFRIAEFDIIFGQGISQLGCLVDIAEQTDVINRKGAWYSYQGDNIAQGRDNTIKYLEENP
EKVAEIEAAVHEKIEMGALVQANSATSKKSKKNSDVSESESSEMEEE

Nucleotide

• Length: 1104 bp

>NTDB_id=55051 PCC7418_RS02195 WP_015224539.1 481412..482515(-) (recA) [Halothece sp. PCC 7418]
ATGGCATCAACTAGTACAATGACTAATAATCCCGATAAAGAGAAAGCCCTGAACTTGGTGCTAAATCAGATTGAGCGCAA
TTTTGGCAAAGGCTCAATTATGCGCCTTGGGGATGCAGCGCAGATGAAGGTGGAAACCATTCCCACTGGTGCACATACCC
TTGATATTGCCTTGGGTGGGGGGTTACCCAAAGGGAGAATTATTGAAATCTATGGTCCAGAAAGTTCAGGGAAGACAACC
TTAGCTCTCCACGCGATCGCGGAAGCCCAGAAAGCAGGAGGAGTGGCTGCTTTTGTGGATGCCGAACACGCCCTCGACCC
CACGTATTCCGATGTTCTAGGGGTTGACATTGAGAACCTTTTAGTCTCTCAGCCAGACACAGGAGAATCGGCGTTGGAGA
TTGTGGATCAACTGGTGCGGTCTGCTGCGGTTGATATTGTTGTGGTGGATTCTGTAGCAGCCCTTACCCCCCGCGCTGAA
ATTGAAGGGGAAATGGGAGATACGCAAGTGGGGTTACAAGCTCGTTTGATGAGTAAAGCTCTGCGAAAAATTGCTGGGAA
TATTGGTCGATCAGGCTGTACGGTAATTTTCCTCAACCAACTGCGACAAAAAATTGGGGTGACTTACGGTAGCCCAGAAG
TGACCACAGGGGGTAACGCGCTCAAGTTTTATTGTTCGGTACGCTTGGATATTCGACGCATCCAAACCCTGAAAAAAGGA
AGTGAAGGGGAATATGGAATTCGAGCGAAAGTGAAAGTGGCGAAGAATAAAGTTGCGCCACCGTTCCGTATTGCTGAGTT
TGATATTATCTTTGGACAGGGGATTTCTCAGTTAGGCTGTTTGGTGGATATTGCAGAACAAACAGATGTCATTAATCGCA
AAGGCGCGTGGTACAGCTATCAGGGAGATAATATTGCTCAAGGACGGGATAACACCATTAAATATTTAGAGGAAAATCCA
GAAAAGGTTGCTGAAATTGAAGCAGCGGTTCACGAAAAAATCGAAATGGGTGCACTGGTTCAGGCTAACTCAGCCACCAG
TAAAAAGTCGAAGAAAAATAGTGACGTGAGTGAGAGTGAGTCTTCTGAGATGGAAGAAGAGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (15-276)

3D structure

• AlphaFold DB: K9Y6W5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Acinetobacter baylyi ADP1	63.61	95.095	0.605
recA	Acinetobacter baumannii D1279779	65.741	88.283	0.58
recA	Pseudomonas stutzeri DSM 10701	59.143	95.368	0.564
recA	Glaesserella parasuis strain SC1401	56.742	97.003	0.55
recA	Neisseria gonorrhoeae MS11	62.733	87.738	0.55
recA	Neisseria gonorrhoeae strain FA1090	62.733	87.738	0.55
recA	Neisseria gonorrhoeae MS11	62.733	87.738	0.55
recA	Helicobacter pylori 26695	60.909	89.918	0.548
recA	Helicobacter pylori strain NCTC11637	60.909	89.918	0.548
recA	Ralstonia pseudosolanacearum GMI1000	62.229	88.011	0.548
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	58.944	92.916	0.548
recA	Streptococcus pneumoniae Rx1	54.596	97.82	0.534
recA	Streptococcus pneumoniae TIGR4	54.596	97.82	0.534
recA	Streptococcus pneumoniae R6	54.596	97.82	0.534
recA	Streptococcus pneumoniae D39	54.596	97.82	0.534
recA	Streptococcus mitis SK321	57.018	93.188	0.531
recA	Vibrio cholerae O1 biovar El Tor strain E7946	60.185	88.283	0.531
recA	Vibrio cholerae strain A1552	60.185	88.283	0.531
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.738	91.553	0.529
recA	Streptococcus mitis NCTC 12261	56.725	93.188	0.529
recA	Bacillus subtilis subsp. subtilis str. 168	59.006	87.738	0.518
recA	Latilactobacillus sakei subsp. sakei 23K	58.879	87.466	0.515
recA	Streptococcus mutans UA159	53.846	95.64	0.515
recA	Streptococcus pyogenes NZ131	53.714	95.368	0.512
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	55.09	91.008	0.501
recA	Lactococcus lactis subsp. cremoris KW2	56.173	88.283	0.496