Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   NOS7524_RS27070 Genome accession   NC_019684
Coordinates   6621927..6623003 (+) Length   358 a.a.
NCBI ID   WP_015141672.1    Uniprot ID   K9R1G0
Organism   Nostoc sp. PCC 7524     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 6616927..6628003
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NOS7524_RS27060 (Nos7524_5558) - 6618118..6619485 (-) 1368 WP_015141670.1 N-acetylmuramoyl-L-alanine amidase -
  NOS7524_RS27065 (Nos7524_5559) dnaG 6619738..6621651 (+) 1914 WP_015141671.1 DNA primase -
  NOS7524_RS27070 (Nos7524_5560) recA 6621927..6623003 (+) 1077 WP_015141672.1 recombinase RecA Machinery gene
  NOS7524_RS27075 (Nos7524_5561) - 6623150..6623722 (-) 573 WP_015141673.1 hypothetical protein -
  NOS7524_RS27080 (Nos7524_5562) - 6624180..6624755 (-) 576 WP_041555990.1 TIGR04376 family protein -
  NOS7524_RS31050 (Nos7524_5563) - 6624834..6624968 (-) 135 WP_015141675.1 hypothetical protein -
  NOS7524_RS27085 (Nos7524_5564) - 6625101..6625253 (-) 153 WP_015141676.1 hypothetical protein -
  NOS7524_RS27090 (Nos7524_5565) - 6625617..6626210 (-) 594 WP_015141677.1 MarC family protein -
  NOS7524_RS27095 (Nos7524_5566) - 6626479..6627294 (+) 816 WP_015141678.1 carbon-nitrogen hydrolase family protein -
  NOS7524_RS27100 (Nos7524_5567) - 6627361..6627957 (-) 597 WP_015141679.1 hypothetical protein -

Sequence

Protein


Download         Length: 358 a.a.        Molecular weight: 38491.73 Da        Isoelectric Point: 4.7751

>NTDB_id=54750 NOS7524_RS27070 WP_015141672.1 6621927..6623003(+) (recA) [Nostoc sp. PCC 7524]
MAINTDTSGKQKALNMVLNQIERSFGKGAIMRLGDATRMRVETISTGALTLDLALGGGLPKGRVIEIYGPESSGKTTVAL
HAIAEVQKEGGIAAFVDAEHALDPTYAGALGVDIENLLVSQPDTGESALEIVDQLVRSAAVDIVVIDSVAALVPRAEIEG
DMGDAHVGLQARLMSQALRKITGNIGKSGCTVIFINQLRQKIGVTYGSPETTTGGNALKFYASVRLDIRRIQTLKKGSDE
FGNRVKVKVAKNKVAPPFRIAEFDIIFGKGVSTLGCLVDLAEETGILIRKGAWYSYNGDNISQGRDNAIKYLEEKPEFTE
QIKQLVREKLDKGAVVSANSVSKANEEDEDEELDEEEE

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=54750 NOS7524_RS27070 WP_015141672.1 6621927..6623003(+) (recA) [Nostoc sp. PCC 7524]
ATGGCTATCAATACCGATACTTCCGGCAAGCAAAAGGCGCTGAATATGGTACTCAACCAGATTGAGCGCAGCTTCGGTAA
AGGAGCAATCATGCGCCTGGGAGATGCTACCCGGATGCGGGTAGAAACAATTTCCACTGGGGCGCTGACTTTGGATTTGG
CGTTGGGTGGCGGTTTACCCAAGGGACGGGTAATTGAGATTTATGGGCCGGAAAGTTCCGGTAAGACGACTGTAGCACTT
CATGCGATCGCGGAAGTGCAGAAAGAAGGTGGTATTGCTGCCTTTGTGGATGCAGAACACGCCCTTGACCCCACTTACGC
AGGCGCTTTAGGCGTAGATATAGAAAACTTGCTGGTTTCCCAACCCGATACCGGCGAATCAGCTTTGGAAATTGTGGATC
AGTTAGTGCGTTCCGCCGCCGTTGATATTGTCGTGATTGACTCCGTTGCCGCGTTAGTTCCCCGTGCTGAAATCGAAGGG
GATATGGGTGATGCTCACGTTGGTCTGCAAGCGAGACTGATGAGCCAAGCTCTACGTAAAATTACTGGTAATATTGGTAA
ATCTGGTTGTACAGTTATCTTTATTAACCAGCTACGGCAAAAAATTGGTGTCACCTACGGTAGCCCAGAAACCACCACTG
GCGGTAATGCGTTGAAGTTCTATGCTTCAGTGCGCTTAGATATTCGTCGGATTCAAACCTTGAAAAAGGGTTCTGATGAA
TTCGGCAACCGAGTTAAAGTCAAAGTTGCGAAAAATAAAGTTGCACCACCTTTTAGAATCGCAGAATTCGACATCATTTT
TGGTAAAGGTGTTTCTACTTTAGGTTGTCTAGTAGACTTGGCAGAAGAAACTGGTATTCTGATCCGTAAAGGAGCTTGGT
ACAGTTACAACGGTGATAACATTTCCCAAGGGCGAGATAATGCCATTAAGTACCTAGAAGAAAAGCCAGAATTTACCGAA
CAAATCAAGCAATTGGTACGGGAAAAATTAGATAAGGGAGCAGTTGTTTCTGCGAACTCCGTATCTAAGGCTAATGAAGA
AGATGAAGATGAAGAGTTGGATGAAGAAGAAGAATAG

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(12-272)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB K9R1G0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Acinetobacter baylyi ADP1

64.723

95.81

0.62
  recA Pseudomonas stutzeri DSM 10701

64.118

94.972

0.609
  recA Acinetobacter baumannii D1279779

66.77

89.944

0.601
  recA Ralstonia pseudosolanacearum GMI1000

64.048

92.458

0.592
  recA Bacillus subtilis subsp. subtilis str. 168

62.952

92.737

0.584
  recA Glaesserella parasuis strain SC1401

58.974

98.045

0.578
  recA Neisseria gonorrhoeae MS11

64.375

89.385

0.575
  recA Neisseria gonorrhoeae MS11

64.375

89.385

0.575
  recA Neisseria gonorrhoeae strain FA1090

64.375

89.385

0.575
  recA Helicobacter pylori 26695

61.747

92.737

0.573
  recA Helicobacter pylori strain NCTC11637

61.747

92.737

0.573
  recA Latilactobacillus sakei subsp. sakei 23K

58

97.765

0.567
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

58.551

96.369

0.564
  recA Streptococcus pneumoniae Rx1

57.224

98.603

0.564
  recA Streptococcus pneumoniae D39

57.224

98.603

0.564
  recA Streptococcus pneumoniae R6

57.224

98.603

0.564
  recA Streptococcus pneumoniae TIGR4

57.224

98.603

0.564
  recA Streptococcus mutans UA159

57.062

98.883

0.564
  recA Vibrio cholerae O1 biovar El Tor strain E7946

62.422

89.944

0.561
  recA Vibrio cholerae strain A1552

62.422

89.944

0.561
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

60.976

91.62

0.559
  recA Streptococcus pyogenes NZ131

56.98

98.045

0.559
  recA Streptococcus mitis SK321

60.062

90.223

0.542
  recA Streptococcus mitis NCTC 12261

60.062

90.223

0.542
  recA Lactococcus lactis subsp. cremoris KW2

59.443

90.223

0.536
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

57.704

92.458

0.534

Multiple sequence alignment