Detailed information    

insolico Bioinformatically predicted

Overview


Name   recA   Type   Machinery gene
Locus tag   I6K87_RS07955 Genome accession   NZ_CP069892
Coordinates   1614265..1615410 (+) Length   381 a.a.
NCBI ID   WP_049533430.1    Uniprot ID   A0A1F0NBR8
Organism   Streptococcus anginosus strain FDAARGOS_1357     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1609265..1620410
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6K87_RS07935 (I6K87_07935) ruvA 1610926..1611516 (+) 591 WP_204982534.1 Holliday junction branch migration protein RuvA -
  I6K87_RS07940 (I6K87_07940) - 1611526..1612080 (+) 555 WP_049533427.1 DNA-3-methyladenine glycosylase I -
  I6K87_RS10075 - 1612085..1612171 (+) 87 Protein_1524 CPBP family intramembrane glutamate endopeptidase -
  I6K87_RS07945 (I6K87_07945) - 1612269..1612679 (-) 411 WP_049533428.1 helix-turn-helix domain-containing protein -
  I6K87_RS07950 (I6K87_07950) cinA 1612949..1614217 (+) 1269 WP_049533429.1 competence/damage-inducible protein A Machinery gene
  I6K87_RS07955 (I6K87_07955) recA 1614265..1615410 (+) 1146 WP_049533430.1 recombinase RecA Machinery gene
  I6K87_RS07960 (I6K87_07960) spx 1615497..1615895 (+) 399 WP_003027770.1 transcriptional regulator Spx -
  I6K87_RS07965 (I6K87_07965) - 1615981..1616550 (+) 570 WP_003040606.1 SP0191 family lipoprotein -
  I6K87_RS07970 (I6K87_07970) - 1616655..1617212 (+) 558 WP_049533431.1 SP0191 family lipoprotein -
  I6K87_RS07975 (I6K87_07975) - 1617335..1617601 (+) 267 WP_009569646.1 IreB family regulatory phosphoprotein -
  I6K87_RS07980 (I6K87_07980) ruvX 1617601..1618020 (+) 420 WP_049533432.1 Holliday junction resolvase RuvX -
  I6K87_RS07985 (I6K87_07985) - 1618038..1618349 (+) 312 WP_003027765.1 DUF1292 domain-containing protein -
  I6K87_RS07990 (I6K87_07990) - 1618550..1619791 (+) 1242 WP_049533433.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -
  I6K87_RS07995 (I6K87_07995) - 1619840..1620277 (+) 438 WP_003027763.1 SP_0198 family lipoprotein -

Sequence


Protein


Download         Length: 381 a.a.        Molecular weight: 41223.86 Da        Isoelectric Point: 4.9241

>NTDB_id=537279 I6K87_RS07955 WP_049533430.1 1614265..1615410(+) (recA) [Streptococcus anginosus strain FDAARGOS_1357]
MAKKQKKLEEISKKFGEERQKALDAALKNIEKDFGKGAIMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAQALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVIDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGIMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDEKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELIKIATDLDIIKKAGAWYSYNDEKIGQGSE
NAKKYLADHPEIFDEIDHKVRVHYGLIEDDAEDEKNAEATKSANKVEEVTLDLDDAIEIEE

Nucleotide


Download         Length: 1146 bp        

>NTDB_id=537279 I6K87_RS07955 WP_049533430.1 1614265..1615410(+) (recA) [Streptococcus anginosus strain FDAARGOS_1357]
ATGGCAAAAAAACAAAAAAAATTAGAAGAAATTTCAAAGAAATTTGGCGAGGAACGTCAAAAAGCGCTAGATGCTGCACT
TAAAAATATTGAAAAAGATTTTGGTAAAGGAGCGATTATGCGCCTAGGTGAGCGCGCTGAACAAAAAGTTCAAGTCATGA
GTTCAGGTAGCTTGGCGCTAGATATCGCTCTTGGTGCAGGAGGGTATCCAAAGGGGCGGATTATTGAAATCTATGGACCA
GAGTCTTCTGGTAAGACGACCGTAGCTCTTCATGCAGTAGCGCAGGCTCAAAAAGAAGGCGGTATTGCAGCTTTTATTGA
TGCAGAACACGCTCTTGACCCGGCTTATGCACAAGCCCTTGGAGTTAATATTGATGAACTTTTACTTTCTCAGCCAGACT
CTGGTGAGCAAGGTCTTGAGATTGCTGGGAAATTGATTGACTCTGGTGCGGTAGATTTGGTAGTTATTGACTCCGTGGCA
GCCCTCGTACCACGTGCTGAGATTGATGGAGACATTGGAGATAGTCACGTTGGTTTGCAAGCGCGGATGATGAGTCAAGC
TATGCGTAAATTGTCTGCTTCTATTAACAAAACGAAGACAATTGCGATTTTCATCAACCAATTGCGTGAAAAAGTTGGTA
TTATGTTTGGAAATCCAGAAACAACACCTGGTGGTCGTGCCTTGAAATTCTATGCGTCTGTTCGTTTGGATGTTCGCGGA
AATACCCAAATCAAGGGAACTGGTGATGAAAAAGATACCAATGTTGGTAAGGAAACTAAGATTAAGGTTGTGAAGAATAA
GGTTGCTCCGCCATTTAAGGAAGCTTTCGTAGAAATCATGTATGGCGAAGGAATTTCTAAAACAGGCGAGTTGATTAAAA
TTGCGACAGACCTTGATATTATCAAAAAAGCGGGTGCTTGGTATTCTTATAATGATGAAAAGATTGGTCAAGGGTCTGAA
AATGCTAAGAAATACTTGGCGGATCATCCAGAAATTTTTGATGAAATTGATCATAAAGTTCGAGTGCATTACGGTTTGAT
TGAGGATGATGCTGAAGATGAAAAAAATGCAGAAGCAACTAAATCAGCAAACAAGGTGGAGGAAGTAACGCTAGACTTGG
ATGACGCGATTGAGATTGAGGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1F0NBR8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Streptococcus mitis NCTC 12261

89.529

100

0.898

  recA Streptococcus pneumoniae Rx1

87.824

100

0.89

  recA Streptococcus pneumoniae R6

87.824

100

0.89

  recA Streptococcus pneumoniae TIGR4

87.824

100

0.89

  recA Streptococcus pneumoniae D39

87.824

100

0.89

  recA Streptococcus mitis SK321

88.451

100

0.885

  recA Streptococcus mutans UA159

86.423

100

0.869

  recA Streptococcus pyogenes NZ131

86.089

100

0.861

  recA Lactococcus lactis subsp. cremoris KW2

78.161

91.339

0.714

  recA Latilactobacillus sakei subsp. sakei 23K

66.298

95.013

0.63

  recA Bacillus subtilis subsp. subtilis str. 168

69.909

86.352

0.604

  recA Neisseria gonorrhoeae strain FA1090

60.694

90.814

0.551

  recA Neisseria gonorrhoeae MS11

60.694

90.814

0.551

  recA Neisseria gonorrhoeae MS11

60.694

90.814

0.551

  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

63.272

85.039

0.538

  recA Vibrio cholerae O1 biovar El Tor strain E7946

63.077

85.302

0.538

  recA Vibrio cholerae strain A1552

63.077

85.302

0.538

  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

61.398

86.352

0.53

  recA Acinetobacter baumannii D1279779

61.846

85.302

0.528

  recA Glaesserella parasuis strain SC1401

61.538

85.302

0.525

  recA Acinetobacter baylyi ADP1

60.923

85.302

0.52

  recA Helicobacter pylori strain NCTC11637

58.485

86.614

0.507

  recA Helicobacter pylori 26695

58.485

86.614

0.507

  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

58.308

86.877

0.507

  recA Ralstonia pseudosolanacearum GMI1000

60.883

83.202

0.507

  recA Pseudomonas stutzeri DSM 10701

59.077

85.302

0.504