Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   I6K87_RS07950 Genome accession   NZ_CP069892
Coordinates   1612949..1614217 (+) Length   422 a.a.
NCBI ID   WP_049533429.1    Uniprot ID   -
Organism   Streptococcus anginosus strain FDAARGOS_1357     
Function   facilitate localization of RecA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1607949..1619217
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6K87_RS07925 (I6K87_07925) - 1608141..1608581 (-) 441 WP_049533411.1 LytTR family DNA-binding domain-containing protein -
  I6K87_RS07930 (I6K87_07930) mutL 1608846..1610792 (+) 1947 WP_049533450.1 DNA mismatch repair endonuclease MutL -
  I6K87_RS07935 (I6K87_07935) ruvA 1610926..1611516 (+) 591 WP_204982534.1 Holliday junction branch migration protein RuvA -
  I6K87_RS07940 (I6K87_07940) - 1611526..1612080 (+) 555 WP_049533427.1 DNA-3-methyladenine glycosylase I -
  I6K87_RS10075 - 1612085..1612171 (+) 87 Protein_1524 CPBP family intramembrane glutamate endopeptidase -
  I6K87_RS07945 (I6K87_07945) - 1612269..1612679 (-) 411 WP_049533428.1 helix-turn-helix domain-containing protein -
  I6K87_RS07950 (I6K87_07950) cinA 1612949..1614217 (+) 1269 WP_049533429.1 competence/damage-inducible protein A Machinery gene
  I6K87_RS07955 (I6K87_07955) recA 1614265..1615410 (+) 1146 WP_049533430.1 recombinase RecA Machinery gene
  I6K87_RS07960 (I6K87_07960) spx 1615497..1615895 (+) 399 WP_003027770.1 transcriptional regulator Spx -
  I6K87_RS07965 (I6K87_07965) - 1615981..1616550 (+) 570 WP_003040606.1 SP0191 family lipoprotein -
  I6K87_RS07970 (I6K87_07970) - 1616655..1617212 (+) 558 WP_049533431.1 SP0191 family lipoprotein -
  I6K87_RS07975 (I6K87_07975) - 1617335..1617601 (+) 267 WP_009569646.1 IreB family regulatory phosphoprotein -
  I6K87_RS07980 (I6K87_07980) ruvX 1617601..1618020 (+) 420 WP_049533432.1 Holliday junction resolvase RuvX -
  I6K87_RS07985 (I6K87_07985) - 1618038..1618349 (+) 312 WP_003027765.1 DUF1292 domain-containing protein -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 45701.21 Da        Isoelectric Point: 6.1777

>NTDB_id=537278 I6K87_RS07950 WP_049533429.1 1612949..1614217(+) (cinA) [Streptococcus anginosus strain FDAARGOS_1357]
MKAEIIAVGTEILTGQIVNTNAQFLSEKLASLGVDVYFQTAVGDNEARLLSILEIARNRSNLIILTGGLGPTEDDLTKQT
LSKFLNRRLVFDRMATEKLDRFFASRSDYVRTPNNERQAQIVEGSTPLQNETGLAVGGVIEVSGVTYVVLPGPPSELKPM
VNNELVPLLATGQKLYSRVLRFFGIGESQLVTLLGDLIDTQTDPTIAPYAKTGEVTLRLSTKATSQKEADVKFTRLEKKI
LAVQTFEKQHLADLFYAYGDDNSLGQTAFELLRRAGKTVTAAESLTAGLFQATLANFAGASNVFSGGFVTYSMEEKSRML
GISLAGLEKHGVVSAFTAEKMAEQARKLTASDYAVSLTGVAGPDSLEGHPAGTVYIGLATTEDVQSIKVNIAGRSRTDVR
EIAVLHAFNLLRKTLLKNENML

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=537278 I6K87_RS07950 WP_049533429.1 1612949..1614217(+) (cinA) [Streptococcus anginosus strain FDAARGOS_1357]
ATGAAAGCAGAAATTATTGCTGTGGGTACTGAAATTCTGACAGGTCAGATTGTCAATACAAACGCCCAATTTTTATCTGA
AAAATTAGCGAGTCTGGGAGTAGATGTGTATTTCCAAACAGCGGTCGGAGATAATGAAGCTCGTCTGTTATCCATTTTAG
AAATCGCTCGAAATCGTAGTAATTTGATCATCTTAACTGGAGGATTAGGTCCAACAGAAGATGACTTGACTAAGCAGACT
TTGTCAAAATTCTTAAATCGTAGGTTGGTATTTGACCGAATGGCTACGGAGAAATTGGATCGCTTCTTCGCAAGTAGATC
AGACTATGTGCGAACACCCAATAATGAGCGACAAGCTCAGATAGTGGAAGGCTCGACTCCTCTCCAAAACGAAACCGGAC
TTGCGGTGGGGGGCGTGATTGAAGTCAGTGGCGTGACTTATGTCGTTCTGCCTGGACCGCCTAGTGAATTAAAACCTATG
GTAAATAATGAGCTGGTTCCGCTCTTAGCAACTGGTCAAAAATTGTATTCAAGAGTTTTGCGTTTCTTTGGTATTGGTGA
AAGTCAATTAGTAACCCTTTTAGGGGATTTAATTGATACTCAAACGGATCCGACAATTGCTCCTTATGCTAAGACGGGAG
AAGTGACATTGCGATTGTCCACCAAGGCTACTAGTCAAAAGGAAGCGGATGTTAAGTTTACTCGTTTAGAAAAGAAAATT
TTGGCAGTACAGACTTTTGAGAAACAACATTTAGCTGATCTTTTCTATGCTTATGGAGATGATAATTCTCTGGGACAAAC
AGCTTTTGAACTGTTGAGAAGAGCAGGAAAGACTGTCACAGCAGCTGAAAGTTTGACTGCAGGACTCTTTCAAGCAACTT
TGGCAAACTTTGCTGGAGCCTCCAATGTCTTTAGTGGTGGCTTTGTTACCTACAGTATGGAAGAAAAGAGCCGAATGCTG
GGCATTTCATTGGCAGGCTTGGAAAAGCATGGGGTAGTTTCAGCTTTTACAGCTGAGAAAATGGCTGAGCAGGCAAGAAA
ATTGACCGCTAGTGACTATGCGGTGAGCTTAACAGGTGTCGCAGGTCCAGACAGCTTAGAAGGACATCCAGCAGGGACAG
TTTATATCGGCCTAGCAACCACAGAAGACGTTCAGTCTATTAAGGTTAATATTGCCGGTCGCAGTCGGACAGATGTACGT
GAAATAGCCGTTCTGCATGCTTTCAATCTGCTGCGAAAAACTTTATTAAAAAACGAAAATATGCTATAA

Domains

Predicted by InterproScan.

Probable molybdopterin binding domain (MoCF_biosynth)

(5-170)

Competence-damaged protein (CinA)

(263-415)

Damage-inducible protein CinA KH domain (CinA_KH)

(177-240)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Streptococcus mitis SK321

75.359

99.052

0.746
  cinA Streptococcus mitis NCTC 12261

74.402

99.052

0.737
  cinA Streptococcus pneumoniae TIGR4

74.402

99.052

0.737
  cinA Streptococcus pneumoniae Rx1

74.402

99.052

0.737
  cinA Streptococcus pneumoniae R6

74.402

99.052

0.737
  cinA Streptococcus pneumoniae D39

74.163

99.052

0.735
  cinA Streptococcus mutans UA159

72.34

100

0.725
  cinA Streptococcus suis isolate S10

55.769

98.578

0.55
  cinA Bacillus subtilis subsp. subtilis str. 168

45.694

99.052

0.453