Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   I6J14_RS08585 Genome accession   NZ_CP068057
Coordinates   1694521..1695657 (+) Length   378 a.a.
NCBI ID   WP_115245519.1    Uniprot ID   A0A380JQA6
Organism   Streptococcus dysgalactiae strain FDAARGOS_1157     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1689521..1700657
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J14_RS08560 (I6J14_08560) - 1690315..1691535 (+) 1221 WP_115253194.1 MFS transporter -
  I6J14_RS08565 (I6J14_08565) ruvA 1691537..1692130 (+) 594 WP_115253193.1 Holliday junction branch migration protein RuvA -
  I6J14_RS08570 (I6J14_08570) - 1692140..1692712 (+) 573 WP_115253192.1 DNA-3-methyladenine glycosylase I -
  I6J14_RS08575 (I6J14_08575) - 1692715..1693068 (+) 354 WP_115253191.1 VOC family protein -
  I6J14_RS08580 (I6J14_08580) cinA 1693192..1694463 (+) 1272 WP_115253190.1 competence/damage-inducible protein A Machinery gene
  I6J14_RS08585 (I6J14_08585) recA 1694521..1695657 (+) 1137 WP_115245519.1 recombinase RecA Machinery gene
  I6J14_RS08590 (I6J14_08590) spx 1695955..1696353 (+) 399 WP_003053105.1 transcriptional regulator Spx -
  I6J14_RS08595 (I6J14_08595) - 1696465..1696734 (+) 270 WP_003045720.1 IreB family regulatory phosphoprotein -
  I6J14_RS08600 (I6J14_08600) ruvX 1696731..1697150 (+) 420 WP_003053103.1 Holliday junction resolvase RuvX -
  I6J14_RS08605 (I6J14_08605) - 1697161..1697466 (+) 306 WP_003053101.1 DUF1292 domain-containing protein -
  I6J14_RS08610 (I6J14_08610) - 1697812..1699374 (+) 1563 WP_115253189.1 DUF2079 domain-containing protein -

Sequence

Protein


Download         Length: 378 a.a.        Molecular weight: 40734.41 Da        Isoelectric Point: 4.8451

>NTDB_id=526750 I6J14_RS08585 WP_115245519.1 1694521..1695657(+) (recA) [Streptococcus dysgalactiae strain FDAARGOS_1157]
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKRYLADHPELFDEIDRKVRVKFGLLEESEEESAMVMATEETDDLVLDLDNGIEIED

Nucleotide


Download         Length: 1137 bp        

>NTDB_id=526750 I6J14_RS08585 WP_115245519.1 1694521..1695657(+) (recA) [Streptococcus dysgalactiae strain FDAARGOS_1157]
TTGGCAAAAAAATTGAAAAAAAACGAAGAAATCACTAAAAAATTTGGTGACGAGCGTCGTAAGGCACTTGATGATGCCCT
AAAAAATATTGAAAAAGATTTTGGTAAGGGTGCAGTGATGCGCTTGGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA
GTTCAGGAAGCCTAGCTCTTGATATTGCGCTTGGAGCGGGTGGTTATCCTAAAGGACGTATCATTGAGATCTATGGTCCA
GAATCTTCCGGTAAAACAACTGTGGCTTTACATGCTGTGGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA
TGCCGAGCATGCGCTTGATCCAGCTTACGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTTTTGTCTCAACCAGATT
CTGGAGAACAAGGACTTGAAATTGCAGGTAAGTTGATTGATTCTGGTGCGGTTGACTTGGTTGTTGTCGATTCAGTAGCA
GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC
GATGCGTAAGCTATCGGCTTCTATTAACAAAACAAAAACTATCGCTATCTTTATTAACCAATTGCGTGAAAAAGTTGGTG
TGATGTTTGGAAATCCTGAAACAACACCGGGTGGTCGTGCCTTGAAATTCTATGCTTCTGTTCGTTTAGATGTGCGTGGA
ACCACTCAAATTAAAGGAACTGGTGACCAAAAAGACAGTAGTATTGGTAAAGAAACAAAAATCAAAGTTGTTAAAAACAA
GGTAGCTCCTCCGTTTAAAGTGGCAGAGGTTGAAATCATGTATGGAGAAGGCATTTCCCGTACTGGAGAGCTTGTGAAAA
TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATGGTGAGAAAATTGGTCAAGGTTCTGAA
AATGCTAAGCGTTATTTGGCGGATCATCCAGAATTATTTGATGAGATTGATCGTAAAGTACGTGTTAAATTTGGTTTGCT
TGAAGAAAGCGAAGAAGAATCTGCTATGGTAATGGCGACAGAAGAAACCGATGATCTTGTTTTAGATTTAGATAACGGGA
TTGAAATTGAAGATTAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(21-286)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A380JQA6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Streptococcus pyogenes NZ131

98.413

100

0.984
  recA Streptococcus mutans UA159

87.99

100

0.892
  recA Streptococcus mitis NCTC 12261

85.379

100

0.865
  recA Streptococcus pneumoniae Rx1

84.675

100

0.862
  recA Streptococcus pneumoniae D39

84.675

100

0.862
  recA Streptococcus pneumoniae R6

84.675

100

0.862
  recA Streptococcus pneumoniae TIGR4

84.675

100

0.862
  recA Streptococcus mitis SK321

85.117

100

0.862
  recA Lactococcus lactis subsp. cremoris KW2

78.754

93.386

0.735
  recA Latilactobacillus sakei subsp. sakei 23K

70.623

89.153

0.63
  recA Bacillus subtilis subsp. subtilis str. 168

68.085

87.037

0.593
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

62.315

89.153

0.556
  recA Acinetobacter baylyi ADP1

59.829

92.857

0.556
  recA Acinetobacter baumannii D1279779

59.207

93.386

0.553
  recA Neisseria gonorrhoeae MS11

61.934

87.566

0.542
  recA Neisseria gonorrhoeae MS11

61.934

87.566

0.542
  recA Neisseria gonorrhoeae strain FA1090

61.934

87.566

0.542
  recA Glaesserella parasuis strain SC1401

60

89.947

0.54
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

62.848

85.45

0.537
  recA Vibrio cholerae O1 biovar El Tor strain E7946

61.231

85.979

0.526
  recA Vibrio cholerae strain A1552

61.231

85.979

0.526
  recA Pseudomonas stutzeri DSM 10701

56.897

92.063

0.524
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

59.215

87.566

0.519
  recA Helicobacter pylori 26695

58.084

88.36

0.513
  recA Helicobacter pylori strain NCTC11637

58.084

88.36

0.513
  recA Ralstonia pseudosolanacearum GMI1000

58.133

87.831

0.511