Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   I6H72_RS06815 Genome accession   NZ_CP066055
Coordinates   1363841..1364986 (+) Length   381 a.a.
NCBI ID   WP_020998092.1    Uniprot ID   -
Organism   Streptococcus constellatus strain FDAARGOS_1015     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1358841..1369986
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H72_RS06795 (I6H72_06795) - 1359366..1359635 (+) 270 WP_232619562.1 bacteriocin, lactococcin 972 family protein -
  I6H72_RS06800 (I6H72_06800) - 1359733..1361742 (+) 2010 WP_198457736.1 ABC transporter permease -
  I6H72_RS06805 (I6H72_06805) - 1361739..1362368 (+) 630 WP_020998094.1 ABC transporter ATP-binding protein -
  I6H72_RS06810 (I6H72_06810) cinA 1362524..1363792 (+) 1269 WP_020998093.1 competence/damage-inducible protein A Machinery gene
  I6H72_RS06815 (I6H72_06815) recA 1363841..1364986 (+) 1146 WP_020998092.1 recombinase RecA Machinery gene
  I6H72_RS06820 (I6H72_06820) spx 1365073..1365471 (+) 399 WP_003026638.1 transcriptional regulator Spx -
  I6H72_RS06825 (I6H72_06825) - 1365608..1366108 (+) 501 WP_006269036.1 SP0191 family lipoprotein -
  I6H72_RS10295 - 1366434..1366769 (+) 336 WP_232619563.1 YehR family protein -
  I6H72_RS06835 (I6H72_06835) - 1366893..1367159 (+) 267 WP_009569646.1 IreB family regulatory phosphoprotein -
  I6H72_RS06840 (I6H72_06840) ruvX 1367159..1367578 (+) 420 WP_003071469.1 Holliday junction resolvase RuvX -
  I6H72_RS06845 (I6H72_06845) - 1367596..1367901 (+) 306 WP_006269082.1 DUF1292 domain-containing protein -
  I6H72_RS06850 (I6H72_06850) - 1368102..1369346 (+) 1245 WP_048801168.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -
  I6H72_RS06855 (I6H72_06855) - 1369395..1369832 (+) 438 WP_003071462.1 SP_0198 family lipoprotein -

Sequence

Protein


Download         Length: 381 a.a.        Molecular weight: 41263.97 Da        Isoelectric Point: 5.0651

>NTDB_id=516867 I6H72_RS06815 WP_020998092.1 1363841..1364986(+) (recA) [Streptococcus constellatus strain FDAARGOS_1015]
MAKKQKKLEEISKKFGEERQKALDNALKNIEKDFGKGAIMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAQALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVIDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGIMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDEKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELIKIATDLDIIKKAGAWYSYNDEKIGQGSE
NAKKYLAAHPEIFDEIDHKVRVHYGLIENDTEDEKNAEAIKSANKVEEVTLDLDDAIEIEE

Nucleotide


Download         Length: 1146 bp        

>NTDB_id=516867 I6H72_RS06815 WP_020998092.1 1363841..1364986(+) (recA) [Streptococcus constellatus strain FDAARGOS_1015]
ATGGCGAAAAAACAAAAAAAATTAGAAGAAATTTCAAAGAAATTTGGTGAGGAACGTCAAAAAGCGTTAGATAATGCACT
TAAAAATATCGAAAAAGATTTTGGTAAAGGGGCAATTATGCGTTTGGGGGAGCGCGCTGAACAAAAAGTTCAAGTTATGA
GCTCAGGTAGCTTGGCGTTAGATATTGCACTTGGCGCAGGAGGGTACCCAAAAGGTCGGATTATTGAAATCTATGGACCA
GAATCATCTGGTAAGACGACAGTGGCCCTCCATGCTGTTGCTCAGGCTCAGAAAGAAGGCGGAATTGCGGCCTTTATTGA
TGCTGAGCACGCTCTGGATCCGGCGTATGCGCAAGCTCTTGGGGTTAATATTGACGAATTACTCCTTTCTCAACCAGATT
CTGGCGAGCAAGGACTAGAAATTGCTGGGAAATTGATTGATTCTGGTGCAGTAGATTTGGTGGTTATTGACTCTGTGGCA
GCTCTTGTACCGCGTGCTGAAATTGATGGTGATATCGGAGATAGCCATGTTGGTTTGCAAGCGCGTATGATGAGTCAAGC
TATGCGTAAACTATCTGCTTCTATCAACAAAACCAAAACGATTGCAATCTTCATCAACCAACTACGCGAAAAAGTTGGTA
TTATGTTTGGAAATCCAGAAACAACACCGGGCGGTCGAGCTCTTAAATTTTATGCTTCTGTCCGTCTGGATGTCCGTGGC
AATACTCAAATCAAGGGAACTGGTGATGAAAAGGACACTAATGTCGGTAAGGAAACCAAAATTAAGGTTGTGAAAAACAA
GGTGGCTCCGCCATTTAAAGAAGCCTTTGTGGAAATCATGTATGGTGAAGGAATTTCCAAAACAGGTGAGCTCATCAAGA
TTGCAACAGACCTAGATATTATCAAAAAAGCGGGCGCGTGGTATTCTTACAATGATGAAAAGATTGGGCAAGGGTCTGAA
AATGCTAAGAAATACTTAGCAGCTCATCCAGAAATTTTTGATGAAATTGATCACAAGGTTCGAGTTCACTATGGTTTGAT
TGAGAATGATACTGAAGATGAAAAAAATGCAGAAGCAATTAAATCAGCAAACAAAGTAGAGGAAGTGACTCTAGACTTGG
ACGATGCGATTGAGATTGAGGAATAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(21-286)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Streptococcus pneumoniae R6

88.083

100

0.892
  recA Streptococcus pneumoniae TIGR4

88.083

100

0.892
  recA Streptococcus pneumoniae Rx1

88.083

100

0.892
  recA Streptococcus pneumoniae D39

88.083

100

0.892
  recA Streptococcus mitis NCTC 12261

88.714

100

0.887
  recA Streptococcus mitis SK321

87.927

100

0.879
  recA Streptococcus mutans UA159

86.162

100

0.866
  recA Streptococcus pyogenes NZ131

85.827

100

0.858
  recA Lactococcus lactis subsp. cremoris KW2

77.874

91.339

0.711
  recA Latilactobacillus sakei subsp. sakei 23K

65.746

95.013

0.625
  recA Bacillus subtilis subsp. subtilis str. 168

69.578

87.139

0.606
  recA Neisseria gonorrhoeae strain FA1090

60.694

90.814

0.551
  recA Neisseria gonorrhoeae MS11

60.694

90.814

0.551
  recA Neisseria gonorrhoeae MS11

60.694

90.814

0.551
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

63.272

85.039

0.538
  recA Vibrio cholerae O1 biovar El Tor strain E7946

62.769

85.302

0.535
  recA Vibrio cholerae strain A1552

62.769

85.302

0.535
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

60.79

86.352

0.525
  recA Acinetobacter baumannii D1279779

61.538

85.302

0.525
  recA Glaesserella parasuis strain SC1401

61.231

85.302

0.522
  recA Acinetobacter baylyi ADP1

60.615

85.302

0.517
  recA Pseudomonas stutzeri DSM 10701

56.034

91.339

0.512
  recA Helicobacter pylori 26695

58.485

86.614

0.507
  recA Helicobacter pylori strain NCTC11637

58.485

86.614

0.507
  recA Ralstonia pseudosolanacearum GMI1000

60.883

83.202

0.507
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

58.006

86.877

0.504