Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   I6H72_RS06810 Genome accession   NZ_CP066055
Coordinates   1362524..1363792 (+) Length   422 a.a.
NCBI ID   WP_020998093.1    Uniprot ID   -
Organism   Streptococcus constellatus strain FDAARGOS_1015     
Function   facilitate localization of RecA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1357524..1368792
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H72_RS06785 (I6H72_06785) - 1357553..1357967 (-) 415 Protein_1324 EamA family transporter -
  I6H72_RS06790 (I6H72_06790) - 1358128..1358983 (-) 856 Protein_1325 helix-turn-helix domain-containing protein -
  I6H72_RS06795 (I6H72_06795) - 1359366..1359635 (+) 270 WP_232619562.1 bacteriocin, lactococcin 972 family protein -
  I6H72_RS06800 (I6H72_06800) - 1359733..1361742 (+) 2010 WP_198457736.1 ABC transporter permease -
  I6H72_RS06805 (I6H72_06805) - 1361739..1362368 (+) 630 WP_020998094.1 ABC transporter ATP-binding protein -
  I6H72_RS06810 (I6H72_06810) cinA 1362524..1363792 (+) 1269 WP_020998093.1 competence/damage-inducible protein A Machinery gene
  I6H72_RS06815 (I6H72_06815) recA 1363841..1364986 (+) 1146 WP_020998092.1 recombinase RecA Machinery gene
  I6H72_RS06820 (I6H72_06820) spx 1365073..1365471 (+) 399 WP_003026638.1 transcriptional regulator Spx -
  I6H72_RS06825 (I6H72_06825) - 1365608..1366108 (+) 501 WP_006269036.1 SP0191 family lipoprotein -
  I6H72_RS10295 - 1366434..1366769 (+) 336 WP_232619563.1 YehR family protein -
  I6H72_RS06835 (I6H72_06835) - 1366893..1367159 (+) 267 WP_009569646.1 IreB family regulatory phosphoprotein -
  I6H72_RS06840 (I6H72_06840) ruvX 1367159..1367578 (+) 420 WP_003071469.1 Holliday junction resolvase RuvX -
  I6H72_RS06845 (I6H72_06845) - 1367596..1367901 (+) 306 WP_006269082.1 DUF1292 domain-containing protein -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46083.81 Da        Isoelectric Point: 5.6090

>NTDB_id=516866 I6H72_RS06810 WP_020998093.1 1362524..1363792(+) (cinA) [Streptococcus constellatus strain FDAARGOS_1015]
MKAEIIAVGTEILTGQIVNTNAQFLSEKLASLGIDVYFQTAVGDNENRLLSILEIAKKRSDLVILCGGLGPTEDDLTKQV
LAKFLNRRLVFDQVAMEKLDRFFASRLDYVRTPNNERQAQIVEDSTSLQNETGLAVGGVIEVSGVTYVVLPGPPSELKPM
VNNELIPILATDQKLYSRVLRFFGIGESQLVTLLGDLIDAQIDPTIAPYAKTGEVTLRLSTKASSQKEADTKFAYLEKKI
LAVQTFEKQRLVDLFYAYGDDNSLAQTTFELLRRAGKTVTAAESLTAGLFQATLANFSGASNVFSGGFVTYSMEEKSRML
DIPLADLEKHGVVSAFTAKKMAEQARKLTASDYAVSLTGVAGPDSLEGYPAGTVYIGLATTENVQSFKVNIAGRSRTDVR
KIAVLHAFNQLRKTLLKNENML

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=516866 I6H72_RS06810 WP_020998093.1 1362524..1363792(+) (cinA) [Streptococcus constellatus strain FDAARGOS_1015]
ATGAAAGCAGAAATTATTGCTGTAGGTACTGAAATTCTGACCGGGCAAATTGTCAATACGAATGCTCAATTTTTATCGGA
AAAATTAGCTAGTTTAGGGATTGATGTTTATTTCCAGACTGCTGTCGGTGACAATGAAAATCGTCTTTTATCTATTTTGG
AAATTGCAAAGAAACGGAGCGATCTTGTCATTCTTTGTGGTGGCTTGGGTCCAACAGAAGATGACTTGACCAAACAGGTG
TTGGCAAAATTTTTAAATCGCAGGTTGGTCTTTGACCAAGTAGCTATGGAAAAATTAGATCGTTTCTTCGCGAGTCGACT
GGACTATGTTCGAACACCAAATAATGAGCGGCAAGCTCAGATAGTGGAAGATTCGACTTCTCTACAAAACGAAACCGGAC
TTGCGGTAGGGGGTGTGATTGAAGTAAGTGGTGTAACTTATGTTGTTCTGCCCGGTCCACCTAGTGAATTAAAACCTATG
GTGAACAATGAGCTGATTCCGATTTTAGCAACGGATCAAAAATTGTATTCAAGAGTTTTGCGCTTCTTTGGCATTGGTGA
AAGTCAATTAGTAACTCTTTTAGGAGATTTAATTGATGCTCAGATCGATCCGACCATTGCTCCTTATGCTAAGACGGGAG
AGGTGACATTGCGATTGTCCACAAAGGCTAGCAGTCAAAAAGAAGCAGATACTAAGTTTGCTTATTTGGAAAAGAAAATT
TTAGCTGTACAGACTTTTGAGAAACAACGTTTAGTGGACCTTTTCTATGCTTATGGAGATGATAATTCTCTAGCGCAGAC
AACTTTTGAATTGTTGAGGAGAGCAGGCAAGACTGTTACAGCAGCCGAAAGTTTGACTGCAGGCCTTTTTCAAGCAACTT
TGGCAAACTTTTCTGGAGCCTCTAATGTCTTTAGTGGTGGCTTTGTCACTTACAGTATGGAGGAAAAGAGCCGCATGCTG
GACATTCCTTTGGCAGACTTGGAAAAACATGGAGTTGTTTCTGCTTTTACAGCAAAGAAAATGGCTGAGCAGGCCAGAAA
ATTGACTGCCAGTGACTATGCAGTGAGTTTGACGGGTGTGGCAGGTCCAGACAGCTTAGAAGGATATCCGGCAGGGACAG
TTTATATTGGCTTAGCAACCACAGAGAATGTACAATCTTTTAAGGTTAATATTGCCGGTCGTAGTCGGACTGATGTACGA
AAAATAGCTGTTCTGCATGCTTTCAATCAGTTACGAAAAACTTTATTAAAAAACGAAAATATGCTATAA

Domains

Predicted by InterproScan.

Damage-inducible protein CinA KH domain (CinA_KH)

(177-240)

Competence-damaged protein (CinA)

(262-415)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-170)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Streptococcus mitis SK321

74.641

99.052

0.739
  cinA Streptococcus pneumoniae TIGR4

74.163

99.052

0.735
  cinA Streptococcus pneumoniae Rx1

74.163

99.052

0.735
  cinA Streptococcus pneumoniae R6

74.163

99.052

0.735
  cinA Streptococcus pneumoniae D39

73.923

99.052

0.732
  cinA Streptococcus mitis NCTC 12261

73.684

99.052

0.73
  cinA Streptococcus mutans UA159

71.395

100

0.716
  cinA Streptococcus suis isolate S10

55.288

98.578

0.545
  cinA Bacillus subtilis subsp. subtilis str. 168

44.976

99.052

0.445