Detailed information NTG0482013

Bioinformatically predicted

Overview

• Name: comE
• Type: Machinery gene
• Locus tag: IC744_RS17515
• Genome accession: NZ_CP061345
• Coordinates: 758184..758369 (+)
• Length: 61 a.a.
• NCBI ID: WP_396652933.1
• Uniprot ID: -
• Organism: Microbacterium hominis strain 01094
• Function: DNA binding (predicted from homology) DNA binding and uptake

Genomic Context

Location: 753184..763369

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IC744_RS03575 (IC744_03575)	-	753689..754999 (+)	1311	WP_191008556.1	anthranilate synthase component I family protein	-
IC744_RS03580 (IC744_03580)	leuS	755070..757652 (+)	2583	WP_101306297.1	leucine--tRNA ligase	-
IC744_RS17510	-	757778..758062 (+)	285	Protein_714	SLBB domain-containing protein	-
IC744_RS17515	comE	758184..758369 (+)	186	WP_396652933.1	ComEA family DNA-binding protein	Machinery gene
IC744_RS03590 (IC744_03590)	-	758624..760693 (+)	2070	WP_396652934.1	ComEC/Rec2 family competence protein	-
IC744_RS03595 (IC744_03595)	holA	760758..761804 (+)	1047	WP_191008558.1	DNA polymerase III subunit delta	-
IC744_RS03600 (IC744_03600)	rpsT	761871..762131 (-)	261	WP_036285140.1	30S ribosomal protein S20	-

Sequence

Protein

• Length: 61 a.a.
• Molecular weight: 6549.53 Da
• Isoelectric Point: 4.8540

>NTDB_id=482013 IC744_RS17515 WP_396652933.1 758184..758369(+) (comE) [Microbacterium hominis strain 01094]
MNLNTADATALDALPRVGPAIAERIIAWRTENGRFTSVDDLLSVPGIGEKMLAGLRDRVTV

Nucleotide

• Length: 186 bp

>NTDB_id=482013 IC744_RS17515 WP_396652933.1 758184..758369(+) (comE) [Microbacterium hominis strain 01094]
GTGAACCTGAACACCGCCGATGCCACCGCTCTCGACGCGCTGCCCCGCGTCGGCCCGGCGATCGCGGAGCGCATCATCGC
GTGGCGCACCGAGAACGGACGGTTCACGAGCGTCGACGACCTGCTCTCGGTGCCCGGGATCGGCGAGAAGATGCTGGCGG
GGTTGCGCGATCGGGTGACGGTGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (2-60)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comE	Neisseria gonorrhoeae MS11	49.18	100	0.492
comE	Neisseria gonorrhoeae MS11	49.18	100	0.492
comE	Neisseria gonorrhoeae MS11	49.18	100	0.492
comE	Neisseria gonorrhoeae MS11	49.18	100	0.492
comEA	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.459
comA	Synechocystis sp. PCC 6803	46.667	98.361	0.459
comEA/celA/cilE	Streptococcus mitis NCTC 12261	44.262	100	0.443
comEA	Latilactobacillus sakei subsp. sakei 23K	44.262	100	0.443
comEA/celA/cilE	Streptococcus pneumoniae D39	44.262	100	0.443
comEA/celA/cilE	Streptococcus pneumoniae Rx1	44.262	100	0.443
comEA/celA/cilE	Streptococcus mitis SK321	44.262	100	0.443
comEA	Streptococcus thermophilus LMD-9	44.262	100	0.443
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	44.262	100	0.443
comEA/celA/cilE	Streptococcus pneumoniae R6	44.262	100	0.443
comEA	Acinetobacter baylyi ADP1	42.623	100	0.426
comEA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	50	85.246	0.426
comEA	Lactococcus lactis subsp. cremoris KW2	40.984	100	0.41
comEA	Thermus thermophilus HB27	42.105	93.443	0.393
Cj0011c	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.344	100	0.393
comEA	Staphylococcus aureus N315	39.344	100	0.393
comEA	Staphylococcus aureus MW2	39.344	100	0.393
comEA/comE1	Glaesserella parasuis strain SC1401	37.097	100	0.377
comEA	Vibrio cholerae C6706	46	81.967	0.377
comEA	Vibrio cholerae strain A1552	46	81.967	0.377
comE1/comEA	Haemophilus influenzae Rd KW20	38.333	98.361	0.377
comEA	Vibrio parahaemolyticus RIMD 2210633	36.667	98.361	0.361
comEA	Legionella pneumophila str. Paris	36.667	98.361	0.361
comEA	Legionella pneumophila strain ERS1305867	36.667	98.361	0.361