Detailed information    

insolico Bioinformatically predicted

Overview


Name   recA   Type   Machinery gene
Locus tag   FOC72_RS10990 Genome accession   NZ_CP054570
Coordinates   2256696..2257844 (+) Length   382 a.a.
NCBI ID   WP_002894079.1    Uniprot ID   A0A2X3VCS4
Organism   Streptococcus sanguinis strain FDAARGOS_770     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2251696..2262844
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC72_RS10970 (FOC72_10970) - 2252823..2253446 (+) 624 WP_002894088.1 ATP-binding cassette domain-containing protein -
  FOC72_RS10975 (FOC72_10975) - 2253443..2253934 (+) 492 WP_002894087.1 hypothetical protein -
  FOC72_RS10980 (FOC72_10980) - 2254701..2255111 (-) 411 WP_002894082.1 helix-turn-helix domain-containing protein -
  FOC72_RS10985 (FOC72_10985) cinA 2255382..2256638 (+) 1257 WP_032914005.1 competence/damage-inducible protein A Machinery gene
  FOC72_RS10990 (FOC72_10990) recA 2256696..2257844 (+) 1149 WP_002894079.1 recombinase RecA Machinery gene
  FOC72_RS10995 (FOC72_10995) spx 2257930..2258328 (+) 399 WP_002894078.1 transcriptional regulator Spx -
  FOC72_RS11000 (FOC72_11000) - 2258464..2259036 (+) 573 WP_002894077.1 SP0191 family lipoprotein -
  FOC72_RS11005 (FOC72_11005) - 2259142..2259684 (+) 543 WP_002894076.1 hypothetical protein -
  FOC72_RS11010 (FOC72_11010) - 2259863..2260129 (+) 267 WP_002894075.1 IreB family regulatory phosphoprotein -
  FOC72_RS11015 (FOC72_11015) ruvX 2260129..2260548 (+) 420 WP_002894074.1 Holliday junction resolvase RuvX -
  FOC72_RS11020 (FOC72_11020) - 2260573..2260884 (+) 312 WP_002894073.1 DUF1292 domain-containing protein -
  FOC72_RS11025 (FOC72_11025) - 2261065..2262297 (+) 1233 WP_002894072.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  FOC72_RS11030 (FOC72_11030) - 2262355..2262834 (+) 480 WP_002894070.1 SP_0198 family lipoprotein -

Sequence


Protein


Download         Length: 382 a.a.        Molecular weight: 41192.86 Da        Isoelectric Point: 4.7931

>NTDB_id=453532 FOC72_RS10990 WP_002894079.1 2256696..2257844(+) (recA) [Streptococcus sanguinis strain FDAARGOS_770]
MAKKQKKLDEISKKFGDERQKALDNALKNIEKDFGKGAIMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPSYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDEKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELIKIATDLDIIKKAGAWYSYNDEKIGQGSE
NAKKYLADHPEVFDEIDRQVRVRYGLIEGDDLAEVVGSKAESPVETMEEVTLDLDDAIEIEE

Nucleotide


Download         Length: 1149 bp        

>NTDB_id=453532 FOC72_RS10990 WP_002894079.1 2256696..2257844(+) (recA) [Streptococcus sanguinis strain FDAARGOS_770]
ATGGCAAAGAAACAAAAAAAATTAGACGAAATCTCAAAGAAATTCGGCGATGAGCGCCAAAAAGCCTTGGATAATGCCTT
GAAAAACATTGAAAAGGACTTTGGTAAGGGAGCCATTATGCGTCTTGGCGAACGGGCAGAGCAAAAGGTTCAAGTCATGA
GTTCAGGCTCTTTGGCCTTGGATATTGCCCTTGGTGCTGGTGGTTACCCTAAGGGACGGATTATTGAAATTTACGGTCCG
GAGTCTTCTGGTAAGACAACAGTTGCTCTTCACGCCGTTGCTCAAGCGCAAAAAGAAGGTGGTATCGCAGCCTTTATCGA
TGCTGAGCATGCTTTGGATCCGTCATACGCGGCTGCTCTGGGTGTTAATATTGATGAGTTGCTGCTGTCTCAACCTGATT
CTGGAGAACAGGGACTGGAAATTGCTGGTAAGCTGATTGACTCAGGTGCGGTGGACTTGGTGGTTGTGGACTCAGTTGCA
GCCCTTGTACCGCGTGCAGAAATCGATGGCGATATCGGTGACAGCCATGTAGGTTTGCAGGCTCGGATGATGAGTCAGGC
TATGCGCAAGCTGTCTGCTTCTATCAACAAAACGAAGACGATTGCAATTTTCATTAACCAGCTGCGCGAAAAAGTTGGCG
TAATGTTTGGTAATCCTGAAACAACACCAGGTGGCCGTGCACTGAAGTTCTATGCTTCTGTCCGTCTGGATGTCCGTGGT
AATACTCAAATCAAGGGAACTGGCGATGAGAAGGATACTAATGTTGGTAAAGAAACCAAGATCAAGGTTGTTAAAAATAA
GGTAGCTCCGCCATTCAAAGAAGCCTTCGTGGAAATCATGTACGGAGAAGGTATTTCTAAGACAGGTGAGTTGATTAAGA
TTGCGACTGATTTGGATATCATCAAAAAAGCGGGTGCTTGGTACTCCTACAATGATGAAAAGATTGGTCAAGGATCTGAA
AATGCTAAGAAGTACTTGGCTGATCATCCAGAAGTCTTTGACGAAATTGACCGCCAGGTTCGTGTACGCTATGGTTTGAT
TGAAGGCGATGACTTGGCAGAAGTGGTTGGCAGCAAGGCTGAAAGCCCTGTGGAAACGATGGAAGAAGTGACTCTGGATT
TGGACGATGCCATCGAAATTGAAGAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2X3VCS4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Streptococcus mitis NCTC 12261

89.764

99.738

0.895

  recA Streptococcus mitis SK321

89.501

99.738

0.893

  recA Streptococcus pneumoniae R6

87.792

100

0.885

  recA Streptococcus pneumoniae TIGR4

87.792

100

0.885

  recA Streptococcus pneumoniae D39

87.792

100

0.885

  recA Streptococcus pneumoniae Rx1

87.792

100

0.885

  recA Streptococcus pyogenes NZ131

86.387

100

0.864

  recA Streptococcus mutans UA159

85.901

100

0.861

  recA Lactococcus lactis subsp. cremoris KW2

77.273

92.147

0.712

  recA Latilactobacillus sakei subsp. sakei 23K

71.212

86.387

0.615

  recA Bacillus subtilis subsp. subtilis str. 168

69.909

86.126

0.602

  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

64.087

84.555

0.542

  recA Neisseria gonorrhoeae MS11

62.236

86.649

0.539

  recA Neisseria gonorrhoeae strain FA1090

62.236

86.649

0.539

  recA Neisseria gonorrhoeae MS11

62.236

86.649

0.539

  recA Glaesserella parasuis strain SC1401

60.294

89.005

0.537

  recA Vibrio cholerae strain A1552

62.462

85.079

0.531

  recA Vibrio cholerae O1 biovar El Tor strain E7946

62.462

85.079

0.531

  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

61.702

86.126

0.531

  recA Acinetobacter baumannii D1279779

61.846

85.079

0.526

  recA Helicobacter pylori 26695

55.432

93.979

0.521

  recA Helicobacter pylori strain NCTC11637

55.432

93.979

0.521

  recA Acinetobacter baylyi ADP1

61.231

85.079

0.521

  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

58.683

87.435

0.513

  recA Pseudomonas stutzeri DSM 10701

58.716

85.602

0.503

  recA Ralstonia pseudosolanacearum GMI1000

60.252

82.984

0.5