Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   I6H74_RS02800 Genome accession   NZ_CP066069
Coordinates   542312..542761 (+) Length   149 a.a.
NCBI ID   WP_003053369.1    Uniprot ID   A0ABU0A4B8
Organism   Streptococcus dysgalactiae strain FDAARGOS_1017     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 537312..547761
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H74_RS02775 (I6H74_02770) - 537980..538507 (+) 528 WP_022555174.1 5-formyltetrahydrofolate cyclo-ligase -
  I6H74_RS02780 (I6H74_02775) - 538504..539178 (+) 675 WP_115257037.1 rhomboid family intramembrane serine protease -
  I6H74_RS02785 (I6H74_02780) - 539355..539969 (-) 615 WP_115257036.1 DUF6198 family protein -
  I6H74_RS02790 (I6H74_02785) hasC 540161..541063 (-) 903 WP_003053363.1 UTP--glucose-1-phosphate uridylyltransferase HasC -
  I6H74_RS02795 (I6H74_02790) - 541095..542111 (-) 1017 WP_003053365.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  I6H74_RS02800 (I6H74_02795) rcrR 542312..542761 (+) 450 WP_003053369.1 MarR family transcriptional regulator Regulator
  I6H74_RS02805 (I6H74_02800) - 542754..544460 (+) 1707 WP_115257035.1 ABC transporter ATP-binding protein -
  I6H74_RS02810 (I6H74_02805) - 544463..546247 (+) 1785 WP_198455561.1 ABC transporter ATP-binding protein -
  I6H74_RS02815 (I6H74_02810) - 546367..547134 (+) 768 WP_014612596.1 epoxyqueuosine reductase QueH -
  I6H74_RS02820 (I6H74_02815) - 547242..547688 (+) 447 WP_003053378.1 dUTP diphosphatase -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17415.30 Da        Isoelectric Point: 9.5972

>NTDB_id=453532 I6H74_RS02800 WP_003053369.1 542312..542761(+) (rcrR) [Streptococcus dysgalactiae strain FDAARGOS_1017]
MSRVIADLRELTHQVEQISDEIAKKYDLEHLAGPQGHVLVFLSKHQDQEIFVKDIEKELQISKSVTSNLVKRMVKNGFIK
VLPSQVDKRYKQVILAKAGREKLPLLQECRKDIEHYFFKEITREELLTVKKVIQQLKQNMLTYKGENDA

Nucleotide


Download         Length: 450 bp        

>NTDB_id=453532 I6H74_RS02800 WP_003053369.1 542312..542761(+) (rcrR) [Streptococcus dysgalactiae strain FDAARGOS_1017]
ATGTCACGAGTAATTGCAGATTTGCGTGAGTTGACACATCAGGTTGAACAAATTAGCGATGAAATTGCAAAGAAATATGA
CCTTGAACATTTAGCAGGACCCCAGGGACACGTTTTGGTTTTTCTATCCAAGCATCAAGATCAAGAAATTTTTGTGAAGG
ACATTGAAAAAGAACTCCAAATTTCAAAATCAGTTACCAGTAATCTTGTTAAACGCATGGTCAAAAATGGTTTTATTAAG
GTTCTTCCTTCCCAAGTAGACAAGCGCTACAAGCAAGTCATTTTGGCTAAGGCAGGACGAGAGAAACTGCCTTTGTTGCA
AGAATGTCGTAAGGATATTGAACATTATTTCTTTAAAGAAATCACGAGAGAGGAGTTGCTGACGGTTAAAAAGGTGATTC
AGCAGCTTAAGCAAAATATGCTAACTTATAAAGGAGAGAACGATGCTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

45.714

93.96

0.43