Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   MGAS15252_RS07940 Genome accession   NC_017040
Coordinates   1654226..1655362 (-) Length   378 a.a.
NCBI ID   WP_014407932.1    Uniprot ID   -
Organism   Streptococcus pyogenes MGAS15252     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1649226..1660362
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MGAS15252_RS07915 (MGAS15252_1639) - 1650448..1652007 (-) 1560 WP_014407931.1 membrane protein -
  MGAS15252_RS07920 (MGAS15252_1640) - 1652420..1652725 (-) 306 WP_002982199.1 DUF1292 domain-containing protein -
  MGAS15252_RS07925 (MGAS15252_1641) ruvX 1652737..1653156 (-) 420 WP_002982196.1 Holliday junction resolvase RuvX -
  MGAS15252_RS07930 (MGAS15252_1642) - 1653153..1653422 (-) 270 WP_002982194.1 IreB family regulatory phosphoprotein -
  MGAS15252_RS07935 (MGAS15252_1643) spx 1653537..1653935 (-) 399 WP_002982188.1 transcriptional regulator Spx -
  MGAS15252_RS07940 (MGAS15252_1644) recA 1654226..1655362 (-) 1137 WP_014407932.1 recombinase RecA Machinery gene
  MGAS15252_RS07945 (MGAS15252_1645) cinA 1655451..1656722 (-) 1272 WP_014407933.1 competence/damage-inducible protein A Machinery gene
  MGAS15252_RS07950 (MGAS15252_1646) - 1656791..1657351 (-) 561 WP_010922755.1 DNA-3-methyladenine glycosylase I -
  MGAS15252_RS07955 (MGAS15252_1647) ruvA 1657361..1657957 (-) 597 WP_002992186.1 Holliday junction branch migration protein RuvA -
  MGAS15252_RS07960 (MGAS15252_1648) - 1657959..1659179 (-) 1221 WP_014407934.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 378 a.a.        Molecular weight: 40617.20 Da        Isoelectric Point: 4.8973

>NTDB_id=44418 MGAS15252_RS07940 WP_014407932.1 1654226..1655362(-) (recA) [Streptococcus pyogenes MGAS15252]
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKDTKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKRYLADHPQLFDEIDRKVRVKFGLLEESEEESAMAVASEETDDLALDLDNGIEIED

Nucleotide


Download         Length: 1137 bp        

>NTDB_id=44418 MGAS15252_RS07940 WP_014407932.1 1654226..1655362(-) (recA) [Streptococcus pyogenes MGAS15252]
TTGGCAAAAAAATTAAAAAAGAATGAAGAAATCACTAAGAAGTTTGGTGACGAACGTCGCAAAGCTCTTGATGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGCGCAGTGATGCGATTAGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA
GTTCAGGAAGTCTAGCTCTTGATATTGCGCTTGGAGCTGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGTCCA
GAGTCTTCCGGTAAAACGACTGTGGCTTTACATGCTGTAGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA
TGCCGAGCATGCGCTTGATCCAGCTTATGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTCTTGTCTCAACCAGATT
CTGGAGAACAAGGACTTGAAATTGCAGGTAAATTGATTGATTCTGGTGCGGTTGATCTGGTTGTTGTCGATTCAGTAGCA
GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC
CATGCGTAAATTATCAGCTTCTATTAATAAAACAAAAACTATCGCTATCTTTATTAACCAATTGCGTGAAAAAGTTGGTG
TGATGTTTGGAAATCCTGAAACAACACCAGGTGGTCGAGCTTTGAAATTCTATGCTTCTGTTCGGCTGGATGTGCGTGGA
ACAACTCAAATTAAAGGAACTGGTGACCAAAAAGATAGCAGCATTGGTAAGGATACCAAAATCAAGGTTGTTAAAAACAA
GGTCGCTCCGCCATTTAAGGTAGCAGAAGTTGAAATCATGTATGGGGAAGGTATTTCTCGTACAGGGGAGCTTGTGAAAA
TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATGGTGAGAAGATTGGCCAAGGTTCTGAA
AATGCTAAGCGTTATTTGGCCGATCATCCACAATTGTTTGATGAAATCGACCGTAAAGTACGTGTTAAATTTGGTTTGCT
TGAAGAAAGCGAAGAAGAATCTGCTATGGCAGTAGCATCAGAAGAAACCGATGATCTTGCTTTAGATTTAGATAATGGTA
TTGAAATTGAAGATTAA

Domains

Predicted by InterProScan.

recA bacterial DNA recombination protein (RecA)

(21-286)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Streptococcus pyogenes NZ131

99.471

100

0.995
  recA Streptococcus mutans UA159

87.206

100

0.884
  recA Streptococcus mitis NCTC 12261

85.079

100

0.86
  recA Streptococcus pneumoniae Rx1

84.156

100

0.857
  recA Streptococcus pneumoniae D39

84.156

100

0.857
  recA Streptococcus pneumoniae R6

84.156

100

0.857
  recA Streptococcus pneumoniae TIGR4

84.156

100

0.857
  recA Streptococcus mitis SK321

85.039

100

0.857
  recA Lactococcus lactis subsp. cremoris KW2

78.754

93.386

0.735
  recA Latilactobacillus sakei subsp. sakei 23K

70.623

89.153

0.63
  recA Bacillus subtilis subsp. subtilis str. 168

68.085

87.037

0.593
  recA Acinetobacter baumannii D1279779

59.207

93.386

0.553
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

62.018

89.153

0.553
  recA Acinetobacter baylyi ADP1

59.714

92.593

0.553
  recA Neisseria gonorrhoeae MS11

59.767

90.741

0.542
  recA Neisseria gonorrhoeae MS11

59.767

90.741

0.542
  recA Neisseria gonorrhoeae strain FA1090

59.767

90.741

0.542
  recA Vibrio cholerae strain A1552

58

92.593

0.537
  recA Vibrio cholerae O1 biovar El Tor strain E7946

58

92.593

0.537
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

62.539

85.45

0.534
  recA Glaesserella parasuis strain SC1401

59.412

89.947

0.534
  recA Pseudomonas stutzeri DSM 10701

56.609

92.063

0.521
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

58.912

87.566

0.516
  recA Helicobacter pylori 26695

58.084

88.36

0.513
  recA Helicobacter pylori strain NCTC11637

58.084

88.36

0.513
  recA Ralstonia pseudosolanacearum GMI1000

57.53

87.831

0.505

Multiple sequence alignment