Detailed information NTG0043127

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: DSUI_RS03440
• Genome accession: NC_016616
• Coordinates: 701577..702599 (-)
• Length: 340 a.a.
• NCBI ID: WP_014235817.1
• Uniprot ID: -
• Organism: Azospira oryzae PS
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 696577..707599

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DSUI_RS03410 (Dsui_0701)	hprK	696888..697823 (-)	936	WP_014235811.1	HPr(Ser) kinase/phosphatase	-
DSUI_RS03415 (Dsui_0702)	ptsN	697792..698277 (-)	486	WP_014235812.1	PTS IIA-like nitrogen regulatory protein PtsN	-
DSUI_RS03420 (Dsui_0703)	hpf	698433..698753 (-)	321	WP_014235813.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
DSUI_RS03425 (Dsui_0704)	rpoN/rpoN1	698768..700246 (-)	1479	WP_014235814.1	RNA polymerase factor sigma-54	Machinery gene
DSUI_RS03430 (Dsui_0705)	lptB	700313..701059 (-)	747	WP_014235815.1	LPS export ABC transporter ATP-binding protein	-
DSUI_RS03435 (Dsui_0706)	recX	701125..701580 (-)	456	WP_014235816.1	recombination regulator RecX	-
DSUI_RS03440 (Dsui_0707)	recA	701577..702599 (-)	1023	WP_014235817.1	recombinase RecA	Machinery gene
DSUI_RS03445 (Dsui_0708)	-	702724..704817 (+)	2094	WP_014235818.1	PAS domain S-box protein	-
DSUI_RS03450 (Dsui_0709)	bfr	704882..705361 (-)	480	WP_014235819.1	bacterioferritin	-
DSUI_RS03455 (Dsui_0710)	-	705416..705931 (-)	516	WP_014235820.1	CinA family protein	-
DSUI_RS03460 (Dsui_0711)	-	705928..706446 (-)	519	WP_014235821.1	phosphatidylglycerophosphatase A	-
DSUI_RS03465 (Dsui_0712)	thiL	706424..707395 (-)	972	WP_014235822.1	thiamine-phosphate kinase	-

Sequence

Protein

• Length: 340 a.a.
• Molecular weight: 36092.58 Da
• Isoelectric Point: 5.5825

>NTDB_id=43127 DSUI_RS03440 WP_014235817.1 701577..702599(-) (recA) [Azospira oryzae PS]
MDDNKAKALTAALAQIEKQFGKGAIMKMGETEVDKGVDVVSTGSLGLDVALGVGGLPRGRVVEIYGPESSGKTTLTLQVV
AEMQKLGGTAAFIDAEHALDPQYAQKLGVNIGELLISQPDNGEQALEIADMLVRSGGVDVIVVDSVAALTPKAEIEGEMG
DSMMGLHARLMSQALRKLTANIKKTNTLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGGIKKGDEVIGN
ETRVKVVKNKVSPPFREALFDILYGEGISREGEIIELGVANKLIEKSGAWYSYKGEKIGQGKDNSREFLKANPAIAQEIE
GKIREALGVANPAPAAAAGE

Nucleotide

• Length: 1023 bp

>NTDB_id=43127 DSUI_RS03440 WP_014235817.1 701577..702599(-) (recA) [Azospira oryzae PS]
ATGGACGACAACAAGGCCAAAGCACTAACCGCCGCACTGGCGCAGATTGAAAAGCAGTTCGGCAAGGGCGCCATCATGAA
GATGGGCGAGACCGAAGTGGACAAGGGCGTGGACGTGGTGTCCACCGGCTCCCTGGGCCTGGACGTGGCCCTCGGCGTGG
GCGGCCTGCCCCGGGGCCGGGTGGTGGAAATCTACGGTCCGGAATCCTCCGGCAAGACCACCCTGACCCTGCAGGTCGTC
GCCGAGATGCAGAAGCTGGGCGGCACCGCCGCCTTCATCGACGCGGAACACGCCCTCGATCCCCAGTACGCCCAGAAGCT
GGGCGTGAACATCGGCGAGCTGCTCATCTCCCAGCCGGACAACGGCGAACAGGCCCTGGAAATCGCCGACATGCTGGTGC
GTTCCGGCGGTGTGGACGTGATCGTGGTGGACTCCGTGGCCGCCCTCACCCCCAAGGCCGAAATCGAAGGCGAGATGGGC
GATTCCATGATGGGCCTGCACGCCCGCCTGATGAGCCAGGCCCTGCGCAAGCTCACCGCCAACATCAAGAAGACCAATAC
CCTGGTCATCTTCATCAACCAGATCCGCATGAAGATCGGGGTGATGTTCGGTTCCCCGGAAACCACCACCGGCGGCAACG
CGCTCAAGTTCTACGCCTCCGTGCGCCTGGATATCCGCCGTATCGGCGGCATCAAGAAGGGTGACGAGGTGATCGGCAAC
GAAACCCGCGTCAAGGTGGTGAAGAACAAGGTCTCCCCGCCCTTCCGCGAAGCCCTGTTCGACATCCTCTACGGCGAAGG
CATCTCCCGCGAGGGCGAGATCATCGAACTGGGGGTGGCCAACAAGCTGATCGAGAAGTCCGGCGCCTGGTATTCCTACA
AGGGCGAGAAAATCGGCCAGGGCAAGGACAACTCCCGGGAATTCCTCAAGGCCAACCCGGCCATTGCCCAGGAAATCGAA
GGCAAGATCCGGGAAGCCCTGGGCGTGGCCAACCCCGCCCCGGCGGCCGCTGCCGGGGAATGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	82.803	92.353	0.765
recA	Neisseria gonorrhoeae strain FA1090	75.38	96.765	0.729
recA	Neisseria gonorrhoeae MS11	75.38	96.765	0.729
recA	Neisseria gonorrhoeae MS11	75.38	96.765	0.729
recA	Glaesserella parasuis strain SC1401	74.242	97.059	0.721
recA	Pseudomonas stutzeri DSM 10701	73.414	97.353	0.715
recA	Acinetobacter baylyi ADP1	73.394	96.176	0.706
recA	Acinetobacter baumannii D1279779	72.171	96.176	0.694
recA	Vibrio cholerae O1 biovar El Tor strain E7946	71.084	97.647	0.694
recA	Vibrio cholerae strain A1552	71.084	97.647	0.694
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	67.976	97.353	0.662
recA	Bacillus subtilis subsp. subtilis str. 168	65.861	97.353	0.641
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.152	97.059	0.632
recA	Helicobacter pylori 26695	63.526	96.765	0.615
recA	Helicobacter pylori strain NCTC11637	63.526	96.765	0.615
recA	Latilactobacillus sakei subsp. sakei 23K	62.918	96.765	0.609
recA	Streptococcus mutans UA159	61.934	97.353	0.603
recA	Streptococcus mitis SK321	60.417	98.824	0.597
recA	Streptococcus pneumoniae Rx1	61.027	97.353	0.594
recA	Streptococcus mitis NCTC 12261	61.027	97.353	0.594
recA	Streptococcus pneumoniae D39	61.027	97.353	0.594
recA	Streptococcus pneumoniae R6	61.027	97.353	0.594
recA	Streptococcus pneumoniae TIGR4	61.027	97.353	0.594
recA	Lactococcus lactis subsp. cremoris KW2	60.18	98.235	0.591
recA	Streptococcus pyogenes NZ131	60.909	97.059	0.591
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.79	96.765	0.588