Detailed information NTG0042953

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: VFU_RS14485
• Genome accession: NC_016602
• Coordinates: 3109643..3110695 (-)
• Length: 350 a.a.
• NCBI ID: WP_004723845.1
• Uniprot ID: A0A0Q2SF52
• Organism: Vibrio furnissii NCTC 11218
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3104643..3115695

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VFU_RS14470 (vfu_A02976)	-	3104914..3106101 (-)	1188	WP_014205773.1	aspartate kinase	-
VFU_RS14475 (vfu_A02977)	alaS	3106308..3108890 (-)	2583	WP_014205774.1	alanine--tRNA ligase	-
VFU_RS14480 (vfu_A02978)	recX	3109078..3109548 (-)	471	WP_014205775.1	recombination regulator RecX	-
VFU_RS14485 (vfu_A02979)	recA	3109643..3110695 (-)	1053	WP_004723845.1	recombinase RecA	Machinery gene
VFU_RS14490 (vfu_A02980)	pncC	3110868..3111356 (-)	489	WP_014205776.1	nicotinamide-nucleotide amidase	-
VFU_RS14495 (vfu_A02981)	mutS	3111441..3114002 (+)	2562	WP_014205777.1	DNA mismatch repair protein MutS	-
VFU_RS14500 (vfu_A02982)	rpoS	3114071..3115060 (-)	990	WP_004723838.1	RNA polymerase sigma factor RpoS	Regulator

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 38076.59 Da
• Isoelectric Point: 4.9925

>NTDB_id=42953 VFU_RS14485 WP_004723845.1 3109643..3110695(-) (recA) [Vibrio furnissii NCTC 11218]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLELIS
AAQREGKTCAFIDAEHALDPVYARRLGVKIDELLVSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKEGDEVVGNE
TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIELGVKHKLVEKAGAWYSYNGDKIGQGKANACKYLRENPEVAKFIDG
KLREMLLSPEQVEVAEEPEFGTVPEQQEEF

Nucleotide

• Length: 1053 bp

>NTDB_id=42953 VFU_RS14485 WP_004723845.1 3109643..3110695(-) (recA) [Vibrio furnissii NCTC 11218]
ATGGACGAGAACAAACAGAAGGCTCTGGCCGCGGCCCTGGGTCAAATTGAAAAGCAATTCGGTAAAGGTTCTATCATGCG
TTTGGGTGACAACCGCACGATGGACGTAGAAACGATTTCTACTGGTTCACTTTCTCTGGATATCGCATTGGGTGCTGGTG
GCCTGCCAATGGGCCGTATCGTGGAAATCTACGGTCCAGAATCGTCGGGTAAAACCACGCTGACTCTGGAGCTGATTTCA
GCGGCGCAACGCGAAGGTAAAACTTGTGCTTTCATCGATGCAGAGCACGCTCTGGATCCGGTTTACGCTCGTCGTCTGGG
CGTGAAAATTGATGAGCTGCTGGTGTCTCAGCCAGATACCGGTGAACAAGCGCTGGAAATCTGTGACGCGTTGGCGCGTT
CAGGTGCTGTTGACGTGATCGTGGTTGACTCGGTTGCCGCATTGACGCCAAAAGCGGAGATTGAAGGTGAAATGGGCGAC
AGCCACATGGGTCTGCAAGCGCGTATGCTGTCTCAAGCGATGCGTAAACTGACAGGTAACCTGAAACAGTCAAACTGTAT
GTGTATCTTCATCAACCAAATCCGTATGAAGATTGGTGTGATGTTTGGTAACCCAGAAACCACAACCGGTGGTAACGCAC
TGAAATTCTATGCTTCTGTTCGTTTGGACATTCGTCGTACGGGTTCAATTAAAGAAGGCGATGAAGTGGTGGGCAACGAA
ACGCGCATCAAAGTCGTGAAGAACAAAATTGCAGCACCGTTTAAAGAAGCCAACACGCAAATCATGTACGGCCAAGGCTT
TAACCGTGAAGGTGAGCTGATTGAACTGGGCGTGAAGCACAAGCTGGTCGAAAAAGCAGGTGCTTGGTACAGCTACAACG
GCGACAAAATTGGTCAAGGTAAAGCGAACGCATGCAAATACCTGCGCGAGAATCCTGAAGTGGCGAAGTTCATTGACGGC
AAACTGCGTGAGATGTTGCTAAGCCCTGAACAAGTGGAAGTTGCGGAAGAGCCAGAGTTTGGCACCGTTCCAGAACAACA
AGAAGAGTTTTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: A0A0Q2SF52

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae O1 biovar El Tor strain E7946	90.652	100	0.914
recA	Vibrio cholerae strain A1552	90.652	100	0.914
recA	Acinetobacter baumannii D1279779	71.594	98.571	0.706
recA	Pseudomonas stutzeri DSM 10701	74.924	93.429	0.7
recA	Acinetobacter baylyi ADP1	70.809	98.857	0.7
recA	Glaesserella parasuis strain SC1401	72.086	93.143	0.671
recA	Ralstonia pseudosolanacearum GMI1000	70.552	93.143	0.657
recA	Neisseria gonorrhoeae MS11	68.712	93.143	0.64
recA	Neisseria gonorrhoeae MS11	68.712	93.143	0.64
recA	Neisseria gonorrhoeae strain FA1090	68.712	93.143	0.64
recA	Streptococcus mitis SK321	59.544	100	0.597
recA	Streptococcus mitis NCTC 12261	59.259	100	0.594
recA	Helicobacter pylori 26695	59.706	97.143	0.58
recA	Streptococcus pneumoniae D39	62.848	92.286	0.58
recA	Streptococcus pneumoniae TIGR4	62.848	92.286	0.58
recA	Streptococcus pneumoniae R6	62.848	92.286	0.58
recA	Streptococcus pneumoniae Rx1	62.848	92.286	0.58
recA	Helicobacter pylori strain NCTC11637	59.412	97.143	0.577
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.323	91.143	0.577
recA	Bacillus subtilis subsp. subtilis str. 168	62.305	91.714	0.571
recA	Streptococcus mutans UA159	61.538	92.857	0.571
recA	Streptococcus pyogenes NZ131	61.231	92.857	0.569
recA	Latilactobacillus sakei subsp. sakei 23K	56.125	100	0.563
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.215	94.571	0.56
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.62	89.429	0.56
recA	Lactococcus lactis subsp. cremoris KW2	60.372	92.286	0.557