Detailed information NTG0041390

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: HMPREF0833_RS06865
• Genome accession: NC_015678
• Coordinates: 1504206..1505351 (-)
• Length: 381 a.a.
• NCBI ID: WP_013904316.1
• Uniprot ID: F8DFH1
• Organism: Streptococcus parasanguinis ATCC 15912
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1499206..1510351

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HMPREF0833_RS06830 (HMPREF0833_11395)	-	1499975..1500385 (-)	411	WP_013904313.1	SP_0198 family lipoprotein	-
HMPREF0833_RS06835 (HMPREF0833_11396)	-	1500462..1501694 (-)	1233	WP_013904314.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-
HMPREF0833_RS06840 (HMPREF0833_11397)	-	1501852..1502157 (-)	306	WP_003001941.1	DUF1292 domain-containing protein	-
HMPREF0833_RS06845 (HMPREF0833_11398)	ruvX	1502180..1502599 (-)	420	WP_003014525.1	Holliday junction resolvase RuvX	-
HMPREF0833_RS06850 (HMPREF0833_11399)	-	1502599..1502865 (-)	267	WP_003002070.1	IreB family regulatory phosphoprotein	-
HMPREF0833_RS06855 (HMPREF0833_11400)	-	1502989..1503585 (-)	597	WP_013904315.1	SP0191 family lipoprotein	-
HMPREF0833_RS06860 (HMPREF0833_11401)	spx	1503720..1504118 (-)	399	WP_003009108.1	transcriptional regulator Spx	-
HMPREF0833_RS06865 (HMPREF0833_11402)	recA	1504206..1505351 (-)	1146	WP_013904316.1	recombinase RecA	Machinery gene
HMPREF0833_RS06870 (HMPREF0833_11403)	cinA	1505471..1506739 (-)	1269	WP_013904317.1	competence/damage-inducible protein A	Machinery gene
HMPREF0833_RS06875 (HMPREF0833_11404)	-	1507112..1508143 (+)	1032	WP_013904318.1	S66 peptidase family protein	-
HMPREF0833_RS06880 (HMPREF0833_11405)	-	1508206..1508769 (-)	564	WP_013904319.1	DNA-3-methyladenine glycosylase I	-
HMPREF0833_RS06885 (HMPREF0833_11406)	ruvA	1508779..1509372 (-)	594	WP_013904320.1	Holliday junction branch migration protein RuvA	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 41071.81 Da
• Isoelectric Point: 4.8456

>NTDB_id=41390 HMPREF0833_RS06865 WP_013904316.1 1504206..1505351(-) (recA) [Streptococcus parasanguinis ATCC 15912]
MAKKQKKLDDITKKFGDEREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPSYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDQKDTNVGKETKIKVVKNKVAPPFKEAMVEIMYGEGISRTGELVKIATDLDIIQKAGAWYSYNGEKIGQGSE
NAKKFLADHPEIFDEIDHKVRVHFGLIEEDEAVKSLDKTEEVAPVVEEVTLDLDDAIEIED

Nucleotide

• Length: 1146 bp

>NTDB_id=41390 HMPREF0833_RS06865 WP_013904316.1 1504206..1505351(-) (recA) [Streptococcus parasanguinis ATCC 15912]
ATGGCGAAAAAACAGAAAAAATTAGATGATATCACTAAGAAATTTGGAGATGAGCGTGAAAAAGCGCTCAACGATGCCCT
GAAGTTGATCGAAAAAGACTTTGGTAAAGGATCCATCATGCGTTTGGGTGAACGTGCAGAGCAAAAAGTACAAGTCATGA
GCTCTGGTTCCTTGGCGCTTGATATTGCCTTGGGTGCTGGTGGTTATCCGAAAGGTCGGATCATCGAAATCTATGGTCCA
GAATCATCTGGTAAAACAACCGTTGCCCTCCATGCAGTAGCTCAAGCACAGAAAGAAGGAGGCATTGCAGCCTTTATCGA
TGCGGAGCATGCCTTGGATCCATCTTATGCAGCGGCTCTTGGAGTAAATATCGACGAACTTCTCTTGTCTCAACCAGACT
CAGGGGAGCAAGGACTTGAAATTGCTGGTAAATTGATCGACTCAGGTGCGGTTGATTTGGTGGTTGTCGATTCTGTTGCT
GCCTTGGTACCACGTGCGGAAATCGATGGAGATATCGGGGATAGCCACGTTGGTTTGCAAGCGCGGATGATGAGCCAAGC
GATGCGCAAACTCGGAGCTTCCATCAACAAGACCAAGACCATTGCCATCTTTATTAACCAATTGCGTGAAAAAGTTGGGG
TTATGTTTGGGAATCCTGAAACCACACCTGGTGGTCGTGCCCTTAAATTCTATGCTTCGGTTCGTTTAGATGTCCGTGGG
AATACTCAAATCAAGGGGACTGGGGACCAAAAAGATACCAACGTTGGTAAGGAAACTAAGATCAAGGTTGTAAAGAACAA
GGTAGCTCCACCGTTCAAAGAAGCCATGGTTGAAATCATGTACGGGGAAGGAATTTCACGTACGGGTGAATTGGTTAAAA
TTGCAACAGATTTGGATATCATTCAAAAAGCGGGTGCGTGGTACTCATATAATGGCGAAAAAATTGGTCAAGGATCTGAA
AATGCTAAGAAATTCTTGGCTGACCACCCAGAAATTTTTGACGAAATCGACCACAAGGTTCGGGTACATTTTGGTTTGAT
CGAAGAAGACGAAGCGGTGAAAAGCCTTGATAAAACTGAAGAAGTAGCTCCTGTCGTAGAAGAAGTAACTCTAGATTTAG
ATGACGCAATTGAAATTGAAGATTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (21-286)

3D structure

• AlphaFold DB: F8DFH1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Streptococcus mitis NCTC 12261	90.551	100	0.906
recA	Streptococcus mitis SK321	90.289	100	0.903
recA	Streptococcus pneumoniae Rx1	88.052	100	0.89
recA	Streptococcus pneumoniae D39	88.052	100	0.89
recA	Streptococcus pneumoniae R6	88.052	100	0.89
recA	Streptococcus pneumoniae TIGR4	88.052	100	0.89
recA	Streptococcus mutans UA159	87.206	100	0.877
recA	Streptococcus pyogenes NZ131	87.402	100	0.874
recA	Lactococcus lactis subsp. cremoris KW2	78.571	91.864	0.722
recA	Latilactobacillus sakei subsp. sakei 23K	67.697	93.438	0.633
recA	Bacillus subtilis subsp. subtilis str. 168	69.301	86.352	0.598
recA	Glaesserella parasuis strain SC1401	60.882	89.239	0.543
recA	Acinetobacter baylyi ADP1	58.974	92.126	0.543
recA	Acinetobacter baumannii D1279779	59.884	90.289	0.541
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	63.777	84.777	0.541
recA	Neisseria gonorrhoeae MS11	61.934	86.877	0.538
recA	Neisseria gonorrhoeae MS11	61.934	86.877	0.538
recA	Neisseria gonorrhoeae strain FA1090	61.934	86.877	0.538
recA	Vibrio cholerae strain A1552	62.769	85.302	0.535
recA	Vibrio cholerae O1 biovar El Tor strain E7946	62.769	85.302	0.535
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.702	86.352	0.533
recA	Ralstonia pseudosolanacearum GMI1000	61.199	83.202	0.509
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.61	86.877	0.509
recA	Helicobacter pylori strain NCTC11637	54.674	92.651	0.507
recA	Helicobacter pylori 26695	54.674	92.651	0.507
recA	Pseudomonas stutzeri DSM 10701	57.927	86.089	0.499