Detailed information NTG0408637

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: GPY41_RS18590
• Genome accession: NZ_CP046835
• Coordinates: 2280897..2281946 (-)
• Length: 349 a.a.
• NCBI ID: WP_158123823.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain 07-2444
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2275897..2286946

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPY41_RS18575	-	2276179..2277366 (-)	1188	WP_158123821.1	aspartate kinase	-
GPY41_RS18580	alaS	2277563..2280145 (-)	2583	WP_158123822.1	alanine--tRNA ligase	-
GPY41_RS18585	recX	2280326..2280787 (-)	462	WP_038964353.1	recombination regulator RecX	-
GPY41_RS18590	recA	2280897..2281946 (-)	1050	WP_158123823.1	recombinase RecA	Machinery gene
GPY41_RS18595	pncC	2282080..2282583 (-)	504	WP_158123824.1	nicotinamide-nucleotide amidase	-
GPY41_RS18600	mutS	2282667..2285228 (+)	2562	WP_158123825.1	DNA mismatch repair protein MutS	-
GPY41_RS18605	rpoS	2285304..2286296 (-)	993	WP_017420278.1	RNA polymerase sigma factor RpoS	Regulator

Sequence

Protein

• Length: 349 a.a.
• Molecular weight: 37728.30 Da
• Isoelectric Point: 4.8857

>NTDB_id=408637 GPY41_RS18590 WP_158123823.1 2280897..2281946(-) (recA) [Vibrio vulnificus strain 07-2444]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEIFGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPVYAKKLGVNIDQLLVSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE
TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKCKLIEKSGAWYSYNGDKIGQGKANACKYLKENVDVAKVLDT
KLREMLLSSANINDESAELVEEMPEQEEF

Nucleotide

• Length: 1050 bp

>NTDB_id=408637 GPY41_RS18590 WP_158123823.1 2280897..2281946(-) (recA) [Vibrio vulnificus strain 07-2444]
ATGGACGAGAACAAACAGAAGGCACTGGCCGCCGCACTAGGTCAAATTGAAAAGCAGTTCGGTAAAGGTTCAATCATGCG
CCTAGGTGACAACCGTGCGATGGATGTTGAAACCATCTCGACAGGTTCACTATCTCTGGATATTGCGCTGGGTGCTGGTG
GCTTACCAATGGGCCGTATCGTTGAAATTTTTGGTCCAGAATCTTCAGGTAAAACCACGTTGACCCTTGAGCTGATCGCT
GCGGCTCAACGTGAAGGCAAAACTTGTGCGTTTATCGATGCTGAGCACGCCTTAGATCCTGTGTATGCGAAGAAACTTGG
CGTTAATATCGACCAATTGTTGGTATCTCAGCCTGATACTGGTGAACAAGCATTGGAAATCTGTGATGCTCTTGCTCGCT
CAGGTGCGGTTGACGTTATTGTTGTCGACTCTGTGGCAGCATTGACACCAAAGGCAGAAATTGAAGGTGAGATGGGTGAC
TCGCACATGGGTCTTCAAGCTCGTATGCTCTCTCAAGCGATGCGTAAGTTAACGGGTAACCTAAAACAGTCTAACTGTAT
GTGTATCTTCATCAACCAGATCCGTATGAAGATCGGTGTGATGTTTGGTAACCCAGAAACCACAACAGGTGGTAACGCAC
TGAAATTCTACGCTTCTGTTCGTCTTGATATTCGCCGTACTGGTGCGATCAAAGAAGGCGATGAGGTAGTGGGTAATGAA
ACGCGTATCAAAGTGGTGAAGAATAAGATCGCTGCGCCGTTTAAAGAAGCCAACACTCAAATTATGTACGGCCAGGGCTT
TAACCGTGAAGGCGAACTGATTGACCTAGGCGTGAAATGTAAGCTGATTGAAAAATCAGGTGCTTGGTATAGCTATAACG
GCGACAAAATTGGCCAAGGTAAAGCGAACGCATGTAAGTACCTGAAAGAAAACGTAGATGTAGCAAAAGTACTGGATACA
AAATTGCGTGAAATGTTGCTTTCTTCAGCAAACATCAACGATGAATCGGCAGAGTTAGTCGAAGAAATGCCAGAGCAAGA
AGAGTTTTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	95.783	95.129	0.911
recA	Vibrio cholerae O1 biovar El Tor strain E7946	95.783	95.129	0.911
recA	Pseudomonas stutzeri DSM 10701	74.699	95.129	0.711
recA	Glaesserella parasuis strain SC1401	69.492	100	0.705
recA	Acinetobacter baylyi ADP1	70.145	98.854	0.693
recA	Acinetobacter baumannii D1279779	72.948	94.269	0.688
recA	Neisseria gonorrhoeae MS11	65.805	99.713	0.656
recA	Neisseria gonorrhoeae MS11	65.805	99.713	0.656
recA	Neisseria gonorrhoeae strain FA1090	65.805	99.713	0.656
recA	Ralstonia pseudosolanacearum GMI1000	71.061	89.112	0.633
recA	Helicobacter pylori strain NCTC11637	59.884	98.567	0.59
recA	Helicobacter pylori 26695	59.593	98.567	0.587
recA	Streptococcus pneumoniae Rx1	58.571	100	0.587
recA	Streptococcus pneumoniae R6	58.571	100	0.587
recA	Streptococcus pneumoniae D39	58.571	100	0.587
recA	Streptococcus pneumoniae TIGR4	58.571	100	0.587
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.241	90.544	0.582
recA	Bacillus subtilis subsp. subtilis str. 168	63.24	91.977	0.582
recA	Streptococcus mitis SK321	61.92	92.55	0.573
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.423	94.842	0.573
recA	Lactococcus lactis subsp. cremoris KW2	61.61	92.55	0.57
recA	Streptococcus mitis NCTC 12261	61.61	92.55	0.57
recA	Latilactobacillus sakei subsp. sakei 23K	61.682	91.977	0.567
recA	Streptococcus pyogenes NZ131	60.615	93.123	0.564
recA	Streptococcus mutans UA159	60.615	93.123	0.564
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.258	88.825	0.553