Detailed information NTG0407971

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: GPY43_RS14615
• Genome accession: NZ_CP046797
• Coordinates: 3130534..3131586 (+)
• Length: 350 a.a.
• NCBI ID: WP_004723845.1
• Uniprot ID: A0A0Q2SF52
• Organism: Vibrio furnissii strain 2013V-1001
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3125534..3136586

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPY43_RS14600	rpoS	3126169..3127158 (+)	990	WP_158108064.1	RNA polymerase sigma factor RpoS	Regulator
GPY43_RS14605	mutS	3127227..3129788 (-)	2562	WP_004723840.1	DNA mismatch repair protein MutS	-
GPY43_RS14610	pncC	3129873..3130367 (+)	495	WP_158108065.1	nicotinamide-nucleotide amidase	-
GPY43_RS14615	recA	3130534..3131586 (+)	1053	WP_004723845.1	recombinase RecA	Machinery gene
GPY43_RS14620	recX	3131681..3132151 (+)	471	WP_004723847.1	recombination regulator RecX	-
GPY43_RS14625	alaS	3132339..3134921 (+)	2583	WP_158108066.1	alanine--tRNA ligase	-
GPY43_RS14630	-	3135128..3136315 (+)	1188	WP_038150576.1	aspartate kinase	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 38076.59 Da
• Isoelectric Point: 4.9925

>NTDB_id=407971 GPY43_RS14615 WP_004723845.1 3130534..3131586(+) (recA) [Vibrio furnissii strain 2013V-1001]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLELIS
AAQREGKTCAFIDAEHALDPVYARRLGVKIDELLVSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKEGDEVVGNE
TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIELGVKHKLVEKAGAWYSYNGDKIGQGKANACKYLRENPEVAKFIDG
KLREMLLSPEQVEVAEEPEFGTVPEQQEEF

Nucleotide

• Length: 1053 bp

>NTDB_id=407971 GPY43_RS14615 WP_004723845.1 3130534..3131586(+) (recA) [Vibrio furnissii strain 2013V-1001]
ATGGACGAGAACAAACAGAAGGCTCTGGCCGCGGCCCTGGGTCAAATTGAAAAGCAATTCGGTAAAGGTTCTATCATGCG
CTTGGGTGACAACCGCACGATGGACGTAGAAACGATTTCTACTGGTTCACTTTCTCTGGATATCGCATTGGGTGCTGGTG
GCCTGCCAATGGGCCGTATCGTGGAAATCTACGGTCCAGAATCGTCGGGTAAAACCACGCTGACTCTGGAGCTGATTTCA
GCGGCGCAACGCGAAGGTAAAACTTGTGCTTTCATCGATGCAGAGCACGCTCTGGATCCGGTTTACGCTCGTCGTCTGGG
CGTGAAAATTGATGAGCTGCTGGTGTCTCAGCCAGATACCGGTGAGCAAGCGCTGGAAATCTGTGACGCGTTGGCGCGTT
CAGGTGCTGTTGACGTGATCGTGGTTGACTCGGTTGCCGCATTGACGCCAAAAGCGGAGATTGAAGGTGAAATGGGCGAC
AGCCACATGGGTCTTCAAGCGCGTATGCTGTCTCAAGCGATGCGTAAACTGACAGGTAACCTGAAACAGTCAAACTGTAT
GTGTATCTTCATCAACCAAATCCGTATGAAGATTGGTGTGATGTTTGGTAACCCAGAAACCACAACTGGTGGTAACGCAC
TGAAATTCTATGCTTCTGTTCGTTTGGACATTCGTCGTACGGGTTCAATTAAAGAAGGCGATGAAGTGGTGGGCAACGAA
ACGCGCATCAAAGTCGTGAAGAACAAAATTGCAGCACCGTTTAAAGAAGCCAACACGCAAATCATGTACGGCCAAGGCTT
TAACCGTGAAGGTGAGCTGATTGAACTGGGCGTGAAGCACAAGCTGGTCGAAAAAGCAGGTGCTTGGTACAGCTACAACG
GCGACAAAATTGGTCAAGGTAAAGCGAACGCATGCAAATACCTGCGCGAAAATCCTGAAGTGGCGAAGTTCATTGACGGC
AAACTGCGTGAGATGCTGCTAAGCCCTGAACAAGTGGAAGTTGCGGAAGAGCCAGAGTTTGGCACCGTTCCAGAACAACA
AGAAGAGTTTTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: A0A0Q2SF52

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae O1 biovar El Tor strain E7946	90.652	100	0.914
recA	Vibrio cholerae strain A1552	90.652	100	0.914
recA	Acinetobacter baumannii D1279779	71.594	98.571	0.706
recA	Pseudomonas stutzeri DSM 10701	74.924	93.429	0.7
recA	Acinetobacter baylyi ADP1	70.809	98.857	0.7
recA	Glaesserella parasuis strain SC1401	72.086	93.143	0.671
recA	Ralstonia pseudosolanacearum GMI1000	70.552	93.143	0.657
recA	Neisseria gonorrhoeae MS11	68.712	93.143	0.64
recA	Neisseria gonorrhoeae MS11	68.712	93.143	0.64
recA	Neisseria gonorrhoeae strain FA1090	68.712	93.143	0.64
recA	Streptococcus mitis SK321	59.544	100	0.597
recA	Streptococcus mitis NCTC 12261	59.259	100	0.594
recA	Helicobacter pylori 26695	59.706	97.143	0.58
recA	Streptococcus pneumoniae D39	62.848	92.286	0.58
recA	Streptococcus pneumoniae TIGR4	62.848	92.286	0.58
recA	Streptococcus pneumoniae R6	62.848	92.286	0.58
recA	Streptococcus pneumoniae Rx1	62.848	92.286	0.58
recA	Helicobacter pylori strain NCTC11637	59.412	97.143	0.577
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.323	91.143	0.577
recA	Bacillus subtilis subsp. subtilis str. 168	62.305	91.714	0.571
recA	Streptococcus mutans UA159	61.538	92.857	0.571
recA	Streptococcus pyogenes NZ131	61.231	92.857	0.569
recA	Latilactobacillus sakei subsp. sakei 23K	56.125	100	0.563
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.215	94.571	0.56
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.62	89.429	0.56
recA	Lactococcus lactis subsp. cremoris KW2	60.372	92.286	0.557