Detailed information NTG0407276

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: GPY31_RS10660
• Genome accession: NZ_CP046760
• Coordinates: 396117..397160 (+)
• Length: 347 a.a.
• NCBI ID: WP_005478550.1
• Uniprot ID: Q87LR1
• Organism: Vibrio parahaemolyticus strain AM51552
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 391117..402160

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPY31_RS10645	rpoS	391720..392709 (+)	990	WP_005478537.1	RNA polymerase sigma factor RpoS	Regulator
GPY31_RS10650	mutS	392788..395349 (-)	2562	WP_005478546.1	DNA mismatch repair protein MutS	-
GPY31_RS10655	pncC	395434..395916 (+)	483	WP_005493945.1	nicotinamide-nucleotide amidase	-
GPY31_RS10660	recA	396117..397160 (+)	1044	WP_005478550.1	recombinase RecA	Machinery gene
GPY31_RS10665	recX	397284..397751 (+)	468	WP_005455548.1	recombination regulator RecX	-
GPY31_RS10670	alaS	397894..400476 (+)	2583	WP_005455546.1	alanine--tRNA ligase	-
GPY31_RS10675	-	400679..401866 (+)	1188	WP_005478552.1	aspartate kinase	-
GPY31_RS10680	csrA	401959..402156 (+)	198	WP_004415691.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37432.91 Da
• Isoelectric Point: 5.1850

>NTDB_id=407276 GPY31_RS10660 WP_005478550.1 396117..397160(+) (recA) [Vibrio parahaemolyticus strain AM51552]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPVYAKKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVMVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE
TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKLVEKAGAWYSYNGDKIGQGKANACNYLREHPEIAKTIDT
KLREMLLSPAQPEAPAAGEKPEQEEEF

Nucleotide

• Length: 1044 bp

>NTDB_id=407276 GPY31_RS10660 WP_005478550.1 396117..397160(+) (recA) [Vibrio parahaemolyticus strain AM51552]
ATGGACGAGAACAAACAGAAAGCGCTCGCCGCTGCGCTAGGTCAAATTGAAAAGCAATTCGGTAAAGGCTCTATCATGCG
CCTTGGTGATAACCGCGCAATGGATGTAGAAACCATTTCAACGGGTTCGCTTTCTCTTGATATCGCTTTGGGTGCTGGTG
GTCTACCAATGGGTCGTATCGTTGAGATTTACGGTCCAGAATCTTCAGGTAAAACAACACTAACTCTTGAACTTATTGCT
GCTGCGCAACGTGAAGGCAAAACTTGTGCGTTTATCGATGCAGAACACGCTCTAGATCCTGTATATGCAAAGAAACTTGG
CGTTGATATCGATGCCCTATTGGTTTCTCAACCAGACACTGGTGAGCAAGCTCTAGAGATTTGTGATGCATTAGCTCGCT
CTGGCGCAATCGACGTAATGGTTGTTGACTCTGTTGCTGCTCTAACACCTAAAGCTGAGATCGAAGGCGAAATGGGCGAC
AGCCACATGGGTCTCCAAGCTCGTATGCTTTCTCAAGCAATGCGTAAGCTTACAGGTAACCTGAAACAGTCTAACTGTAT
GTGTATCTTCATCAACCAAATCCGTATGAAGATTGGTGTGATGTTCGGTAACCCTGAAACGACTACTGGCGGTAACGCGC
TTAAGTTTTACGCTTCTGTTCGTTTAGATATCCGTCGTACTGGCGCAATCAAAGAAGGCGATGAAGTTGTAGGTAACGAA
ACGCGTATCAAAGTGGTTAAGAACAAGATTGCAGCACCATTTAAAGAAGCAAACACGCAAATCATGTATGGCCAAGGCTT
TAACCGTGAAGGTGAGTTGATTGACTTAGGCGTGAAGCACAAGCTAGTAGAAAAAGCGGGTGCTTGGTACAGCTACAATG
GCGATAAGATTGGTCAAGGTAAAGCAAACGCTTGTAACTACCTGCGTGAGCATCCAGAAATCGCGAAAACAATCGATACC
AAACTGCGTGAAATGCTACTTTCTCCAGCTCAACCAGAAGCACCTGCTGCCGGTGAGAAGCCTGAGCAAGAAGAAGAGTT
TTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: Q87LR1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	91.643	100	0.916
recA	Vibrio cholerae O1 biovar El Tor strain E7946	91.643	100	0.916
recA	Pseudomonas stutzeri DSM 10701	72.941	97.983	0.715
recA	Acinetobacter baylyi ADP1	72.303	98.847	0.715
recA	Acinetobacter baumannii D1279779	74.695	94.524	0.706
recA	Glaesserella parasuis strain SC1401	70.859	93.948	0.666
recA	Neisseria gonorrhoeae MS11	65.903	100	0.663
recA	Neisseria gonorrhoeae MS11	65.903	100	0.663
recA	Neisseria gonorrhoeae strain FA1090	65.903	100	0.663
recA	Ralstonia pseudosolanacearum GMI1000	71.383	89.625	0.64
recA	Helicobacter pylori 26695	60.294	97.983	0.591
recA	Helicobacter pylori strain NCTC11637	62.08	94.236	0.585
recA	Streptococcus pneumoniae Rx1	62.848	93.084	0.585
recA	Streptococcus pneumoniae R6	62.848	93.084	0.585
recA	Streptococcus pneumoniae D39	62.848	93.084	0.585
recA	Streptococcus pneumoniae TIGR4	62.848	93.084	0.585
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.636	91.931	0.585
recA	Bacillus subtilis subsp. subtilis str. 168	62.617	92.507	0.579
recA	Streptococcus mitis NCTC 12261	61.92	93.084	0.576
recA	Streptococcus pyogenes NZ131	61.231	93.66	0.573
recA	Streptococcus mitis SK321	61.61	93.084	0.573
recA	Streptococcus mutans UA159	60.923	93.66	0.571
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.371	92.507	0.568
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.215	95.389	0.565
recA	Lactococcus lactis subsp. cremoris KW2	60.681	93.084	0.565
recA	Latilactobacillus sakei subsp. sakei 23K	60.748	92.507	0.562