Detailed information NTG0040361

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: CAR_RS03450
• Genome accession: NC_015391
• Coordinates: 700613..701656 (+)
• Length: 347 a.a.
• NCBI ID: WP_013710321.1
• Uniprot ID: F4BNF4
• Organism: Carnobacterium sp. 17-4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 695613..706656

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CAR_RS03430 (CAR_c06810)	-	696648..697373 (+)	726	WP_041556135.1	SDR family oxidoreductase	-
CAR_RS03435 (CAR_c06820)	-	697480..698343 (+)	864	WP_013710318.1	helix-turn-helix domain-containing protein	-
CAR_RS03440 (CAR_c06830)	pgsA	698434..699015 (+)	582	WP_041556136.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
CAR_RS03445 (CAR_c06840)	cinA	699195..700457 (+)	1263	WP_013710320.1	competence/damage-inducible protein A	Machinery gene
CAR_RS03450 (CAR_c06850)	recA	700613..701656 (+)	1044	WP_013710321.1	recombinase RecA	Machinery gene
CAR_RS03455 (CAR_c06860)	rny	701963..703522 (+)	1560	WP_013710322.1	ribonuclease Y	-
CAR_RS03460 (CAR_c06870)	-	703707..704513 (+)	807	WP_013710323.1	TIGR00282 family metallophosphoesterase	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37097.32 Da
• Isoelectric Point: 4.9080

>NTDB_id=40361 CAR_RS03450 WP_013710321.1 700613..701656(+) (recA) [Carnobacterium sp. 17-4]
MADDRKQALDAALKKIEKNFGKGSVMKLGEKVDTRISTVPSGSLALDVALGVGGFPRGRIIEVYGPESSGKTTVALHAVA
EVQKQGGIAAFIDAENALDPKYAAALGVDIDELLLSQPDTGEQGLEIADALVSSGAVDIVVIDSVAALVPRAEIEGEMGD
SHVGLQARLMSQALRKLSGSINKTKTIALFINQIREKVGVMFGNPEITPGGRALKFYATIRLEVRRAEQIKQGTDIMGNR
TKIKVVKNKVAPPFRVAEVDIMYGEGISQVGELVDMGSDKDIIDKAGAWYSYGGERIGQGRENAKKFFKNNPELRAEVEQ
KVRAAYGIGEAGAEEVVEASETDLLED

Nucleotide

• Length: 1044 bp

>NTDB_id=40361 CAR_RS03450 WP_013710321.1 700613..701656(+) (recA) [Carnobacterium sp. 17-4]
ATGGCAGACGATCGTAAACAAGCATTAGACGCAGCGTTAAAAAAGATTGAAAAGAACTTTGGTAAAGGTTCCGTTATGAA
ACTTGGAGAAAAAGTTGATACGCGTATTTCTACAGTCCCTAGTGGATCATTAGCATTAGATGTTGCATTGGGAGTCGGTG
GATTTCCTAGAGGAAGAATTATTGAAGTATATGGTCCTGAGAGCTCAGGTAAAACAACGGTAGCTTTGCATGCTGTTGCT
GAGGTTCAAAAACAAGGCGGAATTGCTGCATTTATTGATGCTGAAAATGCATTGGATCCAAAATACGCAGCTGCACTTGG
AGTAGATATTGACGAATTGCTATTATCGCAACCGGATACAGGTGAACAAGGGTTGGAAATTGCAGATGCATTGGTTTCCA
GTGGAGCAGTGGATATTGTTGTTATTGACTCAGTTGCTGCATTAGTACCACGTGCGGAAATTGAAGGAGAAATGGGAGAC
TCTCATGTAGGGTTACAAGCTCGTTTGATGTCTCAGGCTTTACGTAAATTATCTGGTTCAATCAACAAAACAAAAACTAT
TGCTCTATTTATCAACCAGATTCGTGAAAAAGTTGGTGTTATGTTTGGTAACCCAGAAATTACACCAGGTGGACGTGCTT
TGAAATTTTATGCTACGATTCGTTTAGAAGTTAGAAGAGCTGAACAAATTAAACAAGGTACAGATATTATGGGTAATCGT
ACAAAAATTAAAGTGGTTAAGAATAAAGTTGCTCCACCTTTTAGAGTAGCTGAAGTAGATATCATGTATGGTGAAGGTAT
CTCTCAAGTAGGAGAACTTGTAGATATGGGATCAGATAAAGATATCATTGATAAAGCAGGTGCATGGTATTCTTATGGTG
GCGAACGAATTGGCCAAGGGCGAGAAAATGCAAAAAAATTCTTCAAAAACAATCCTGAATTAAGAGCTGAAGTAGAACAA
AAAGTTCGTGCAGCTTATGGTATTGGAGAAGCAGGTGCTGAAGAAGTAGTAGAAGCGTCTGAAACGGACTTACTAGAAGA
TTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-268)

3D structure

• AlphaFold DB: F4BNF4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	78.963	100	0.79
recA	Bacillus subtilis subsp. subtilis str. 168	78.116	94.813	0.741
recA	Streptococcus mutans UA159	69.429	100	0.7
recA	Streptococcus mitis SK321	70.92	97.118	0.689
recA	Streptococcus pyogenes NZ131	71.903	95.389	0.686
recA	Streptococcus mitis NCTC 12261	69.706	97.983	0.683
recA	Streptococcus pneumoniae Rx1	70.821	94.813	0.671
recA	Streptococcus pneumoniae D39	70.821	94.813	0.671
recA	Streptococcus pneumoniae R6	70.821	94.813	0.671
recA	Streptococcus pneumoniae TIGR4	70.821	94.813	0.671
recA	Lactococcus lactis subsp. cremoris KW2	68.085	94.813	0.646
recA	Neisseria gonorrhoeae strain FA1090	63.222	94.813	0.599
recA	Neisseria gonorrhoeae MS11	63.222	94.813	0.599
recA	Neisseria gonorrhoeae MS11	63.222	94.813	0.599
recA	Ralstonia pseudosolanacearum GMI1000	63.11	94.524	0.597
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	62.691	94.236	0.591
recA	Acinetobacter baumannii D1279779	58.96	99.712	0.588
recA	Glaesserella parasuis strain SC1401	59.531	98.271	0.585
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.43	99.135	0.579
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.231	93.66	0.573
recA	Acinetobacter baylyi ADP1	60.991	93.084	0.568
recA	Vibrio cholerae O1 biovar El Tor strain E7946	59.443	93.084	0.553
recA	Vibrio cholerae strain A1552	59.443	93.084	0.553
recA	Pseudomonas stutzeri DSM 10701	59.259	93.372	0.553
recA	Helicobacter pylori 26695	58.055	94.813	0.55
recA	Helicobacter pylori strain NCTC11637	58.055	94.813	0.55