Detailed information NTG0393497

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: FIV04_RS12420
• Genome accession: NZ_CP045338
• Coordinates: 2786071..2787108 (-)
• Length: 345 a.a.
• NCBI ID: WP_032549782.1
• Uniprot ID: -
• Organism: Vibrio sp. THAF190c
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2781071..2792108

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FIV04_RS12405 (FIV04_12445)	alaS	2781840..2784422 (-)	2583	WP_152469284.1	alanine--tRNA ligase	-
FIV04_RS12410 (FIV04_12455)	tpx	2784689..2785195 (-)	507	WP_152469285.1	thiol peroxidase	-
FIV04_RS12415 (FIV04_12460)	-	2785256..2785534 (-)	279	WP_152469286.1	hypothetical protein	-
FIV04_RS12420 (FIV04_12465)	recA	2786071..2787108 (-)	1038	WP_032549782.1	recombinase RecA	Machinery gene
FIV04_RS12425 (FIV04_12470)	pncC	2787249..2787740 (-)	492	WP_152469287.1	nicotinamide-nucleotide amidase	-
FIV04_RS12430 (FIV04_12475)	mutS	2787873..2790434 (+)	2562	WP_152469288.1	DNA mismatch repair protein MutS	-
FIV04_RS12435 (FIV04_12480)	rpoS	2790520..2791482 (-)	963	WP_152469289.1	RNA polymerase sigma factor RpoS	Regulator

Sequence

Protein

• Length: 345 a.a.
• Molecular weight: 37212.64 Da
• Isoelectric Point: 4.9632

>NTDB_id=393497 FIV04_RS12420 WP_032549782.1 2786071..2787108(-) (recA) [Vibrio sp. THAF190c]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLELIA
AAQREGKTCAFVDAEHALDPIYAQKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVLVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKEGDEIVGNE
TRIKVVKNKIAAPFKQAETQILYGQGFNREGELIDLGVKHKLIEKAGAWYSYNGDKIGQGKANAGKFLRENPEAAKTIDA
KLREMLLTPAQPEEPETGEMPQEEL

Nucleotide

• Length: 1038 bp

>NTDB_id=393497 FIV04_RS12420 WP_032549782.1 2786071..2787108(-) (recA) [Vibrio sp. THAF190c]
ATGGACGAGAATAAACAAAAAGCGTTAGCCGCAGCCCTTGGTCAGATTGAAAAGCAGTTTGGTAAAGGCTCTATCATGCG
TCTTGGTGACAACCGCACAATGGATGTAGAAACGATTTCTACTGGCTCGCTATCTCTAGATATCGCACTAGGTGCTGGTG
GTCTACCAATGGGTCGTATCGTTGAGATCTACGGTCCAGAATCATCAGGTAAAACAACCCTAACACTAGAGCTTATTGCA
GCAGCTCAACGTGAAGGCAAAACGTGTGCATTCGTCGATGCAGAGCACGCACTAGACCCTATCTACGCTCAAAAACTGGG
TGTTGATATCGATGCACTTCTTGTTTCTCAACCAGATACAGGTGAGCAAGCACTAGAAATCTGTGATGCGCTAGCGCGTT
CAGGTGCGATTGACGTTCTTGTTGTCGACTCAGTAGCAGCATTGACACCGAAAGCGGAAATCGAAGGCGAAATGGGCGAC
AGCCACATGGGGCTTCAAGCACGTATGCTTTCTCAAGCTATGCGTAAGCTAACGGGTAACCTTAAGCAATCTAACTGTAT
GTGTATCTTCATCAACCAAATTCGTATGAAGATCGGTGTTATGTTTGGTAACCCAGAGACGACGACTGGTGGTAACGCAC
TTAAGTTCTACGCATCTGTTCGTCTTGATATTCGTCGTACTGGCTCTATCAAAGAGGGCGACGAGATTGTTGGTAACGAA
ACTCGTATCAAGGTTGTTAAGAACAAGATTGCTGCACCATTTAAGCAAGCAGAAACTCAAATTTTATACGGCCAAGGCTT
CAACCGTGAAGGTGAGCTGATTGACCTAGGTGTTAAGCACAAGCTAATTGAAAAGGCAGGTGCTTGGTACAGCTACAACG
GCGATAAGATTGGTCAAGGTAAAGCGAACGCTGGTAAGTTCCTTCGTGAGAACCCAGAAGCAGCGAAAACTATCGATGCT
AAACTTCGTGAAATGCTACTGACTCCAGCTCAGCCTGAAGAGCCAGAGACTGGCGAAATGCCACAAGAAGAGTTGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	87.252	100	0.893
recA	Vibrio cholerae O1 biovar El Tor strain E7946	87.252	100	0.893
recA	Acinetobacter baylyi ADP1	72.384	99.71	0.722
recA	Pseudomonas stutzeri DSM 10701	75.305	95.072	0.716
recA	Acinetobacter baumannii D1279779	74.39	95.072	0.707
recA	Neisseria gonorrhoeae MS11	67.908	100	0.687
recA	Neisseria gonorrhoeae MS11	67.908	100	0.687
recA	Neisseria gonorrhoeae strain FA1090	67.908	100	0.687
recA	Glaesserella parasuis strain SC1401	70.679	93.913	0.664
recA	Ralstonia pseudosolanacearum GMI1000	71.111	91.304	0.649
recA	Helicobacter pylori 26695	59.412	98.551	0.586
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.323	92.464	0.586
recA	Helicobacter pylori strain NCTC11637	59.118	98.551	0.583
recA	Streptococcus mutans UA159	61.231	94.203	0.577
recA	Bacillus subtilis subsp. subtilis str. 168	61.994	93.043	0.577
recA	Streptococcus pneumoniae TIGR4	61.61	93.623	0.577
recA	Streptococcus pneumoniae Rx1	61.61	93.623	0.577
recA	Streptococcus pneumoniae D39	61.61	93.623	0.577
recA	Streptococcus pneumoniae R6	61.61	93.623	0.577
recA	Streptococcus mitis SK321	61.3	93.623	0.574
recA	Streptococcus mitis NCTC 12261	61.3	93.623	0.574
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.517	95.942	0.571
recA	Streptococcus pyogenes NZ131	60.615	94.203	0.571
recA	Latilactobacillus sakei subsp. sakei 23K	59.036	96.232	0.568
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.514	91.884	0.565
recA	Lactococcus lactis subsp. cremoris KW2	59.133	93.623	0.554