Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | GAN19_RS10160 | Genome accession | NZ_CP045084 |
| Coordinates | 2134296..2135339 (+) | Length | 347 a.a. |
| NCBI ID | WP_014614049.1 | Uniprot ID | A0A166NCN9 |
| Organism | Staphylococcus pseudintermedius strain KCTC 43134 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 2053505..2157399 | 2134296..2135339 | within | 0 |
Gene organization within MGE regions
Location: 2053505..2157399
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GAN19_RS09825 | - | 2054465..2054698 (+) | 234 | WP_014614123.1 | acyl carrier protein | - |
| GAN19_RS09830 | rnc | 2055592..2056323 (+) | 732 | WP_014614122.1 | ribonuclease III | - |
| GAN19_RS09835 | smc | 2056327..2059899 (+) | 3573 | WP_037543202.1 | chromosome segregation protein SMC | - |
| GAN19_RS09840 | ftsY | 2059901..2061100 (+) | 1200 | WP_014614120.1 | signal recognition particle-docking protein FtsY | - |
| GAN19_RS09845 | - | 2061104..2061439 (+) | 336 | WP_014614119.1 | putative DNA-binding protein | - |
| GAN19_RS09850 | ffh | 2061453..2062820 (+) | 1368 | WP_015729019.1 | signal recognition particle protein | - |
| GAN19_RS09855 | - | 2063613..2063972 (+) | 360 | WP_037543200.1 | hypothetical protein | - |
| GAN19_RS09860 | - | 2064404..2064988 (+) | 585 | WP_037543198.1 | hypothetical protein | - |
| GAN19_RS09865 | - | 2065200..2067992 (+) | 2793 | WP_037543197.1 | type I restriction endonuclease subunit R | - |
| GAN19_RS09870 | - | 2068436..2069992 (+) | 1557 | WP_037543195.1 | type I restriction-modification system subunit M | - |
| GAN19_RS09875 | - | 2069985..2071250 (+) | 1266 | WP_037543193.1 | restriction endonuclease subunit S | - |
| GAN19_RS09880 | - | 2071352..2072023 (+) | 672 | WP_037543191.1 | hypothetical protein | - |
| GAN19_RS09885 | rpsP | 2072491..2072766 (+) | 276 | WP_014614106.1 | 30S ribosomal protein S16 | - |
| GAN19_RS09890 | rimM | 2073089..2073592 (+) | 504 | WP_014614105.1 | ribosome maturation factor RimM | - |
| GAN19_RS09895 | trmD | 2073589..2074320 (+) | 732 | WP_014614104.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| GAN19_RS09900 | rplS | 2074428..2074778 (+) | 351 | WP_014614103.1 | 50S ribosomal protein L19 | - |
| GAN19_RS09905 | - | 2075046..2075183 (-) | 138 | WP_014614102.1 | beta-class phenol-soluble modulin | - |
| GAN19_RS09910 | - | 2075687..2076115 (+) | 429 | WP_015729030.1 | hypothetical protein | - |
| GAN19_RS09915 | - | 2076116..2076514 (+) | 399 | WP_014614100.1 | hypothetical protein | - |
| GAN19_RS09920 | - | 2076507..2077235 (+) | 729 | WP_238410021.1 | hypothetical protein | - |
| GAN19_RS09925 | - | 2077400..2078032 (-) | 633 | WP_110161076.1 | hypothetical protein | - |
| GAN19_RS09930 | - | 2078259..2080853 (-) | 2595 | WP_110161077.1 | YfhO family protein | - |
| GAN19_RS09935 | - | 2080850..2083459 (-) | 2610 | WP_015729035.1 | YfhO family protein | - |
| GAN19_RS09940 | - | 2083479..2083862 (-) | 384 | WP_015729036.1 | GtrA family protein | - |
| GAN19_RS09945 | ylqF | 2084090..2084962 (+) | 873 | WP_015729037.1 | ribosome biogenesis GTPase YlqF | - |
| GAN19_RS09950 | - | 2084955..2085740 (+) | 786 | WP_140241153.1 | ribonuclease HII | - |
| GAN19_RS09955 | - | 2085832..2086107 (+) | 276 | WP_015729039.1 | hypothetical protein | - |
| GAN19_RS09960 | sucC | 2086374..2087540 (+) | 1167 | WP_015729040.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| GAN19_RS09965 | sucD | 2087562..2088467 (+) | 906 | WP_014614090.1 | succinate--CoA ligase subunit alpha | - |
| GAN19_RS09970 | dprA | 2088706..2089593 (+) | 888 | WP_015729041.1 | DNA-processing protein DprA | Machinery gene |
| GAN19_RS09975 | topA | 2089677..2091746 (+) | 2070 | WP_014614088.1 | type I DNA topoisomerase | - |
| GAN19_RS09980 | trmFO | 2091774..2093078 (+) | 1305 | WP_015729042.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| GAN19_RS09985 | xerC | 2093199..2094089 (+) | 891 | WP_037543179.1 | tyrosine recombinase XerC | - |
| GAN19_RS09990 | hslV | 2094096..2094638 (+) | 543 | WP_014614085.1 | ATP-dependent protease subunit HslV | - |
| GAN19_RS09995 | hslU | 2094653..2096062 (+) | 1410 | WP_014614084.1 | ATP-dependent protease ATPase subunit HslU | - |
| GAN19_RS10000 | codY | 2096082..2096855 (+) | 774 | WP_014614083.1 | GTP-sensing pleiotropic transcriptional regulator CodY | - |
| GAN19_RS10005 | rpsB | 2097022..2097819 (+) | 798 | WP_014614082.1 | 30S ribosomal protein S2 | - |
| GAN19_RS10010 | tsf | 2097909..2098787 (+) | 879 | WP_014614081.1 | translation elongation factor Ts | - |
| GAN19_RS10015 | pyrH | 2098939..2099661 (+) | 723 | WP_014614080.1 | UMP kinase | - |
| GAN19_RS10020 | frr | 2099679..2100233 (+) | 555 | WP_014614079.1 | ribosome recycling factor | - |
| GAN19_RS10025 | - | 2100477..2101238 (+) | 762 | WP_096548694.1 | isoprenyl transferase | - |
| GAN19_RS10030 | - | 2101253..2102035 (+) | 783 | WP_140241154.1 | phosphatidate cytidylyltransferase | - |
| GAN19_RS10035 | - | 2102052..2103182 (+) | 1131 | WP_014614076.1 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | - |
| GAN19_RS10040 | rseP | 2103189..2104469 (+) | 1281 | WP_140241155.1 | RIP metalloprotease RseP | - |
| GAN19_RS10045 | - | 2104494..2106197 (+) | 1704 | WP_105503266.1 | proline--tRNA ligase | - |
| GAN19_RS12525 | - | 2106417..2106563 (-) | 147 | WP_181144030.1 | hypothetical protein | - |
| GAN19_RS10050 | - | 2107114..2111421 (+) | 4308 | WP_105503265.1 | PolC-type DNA polymerase III | - |
| GAN19_RS10055 | rimP | 2111546..2112013 (+) | 468 | WP_014614071.1 | ribosome maturation factor RimP | - |
| GAN19_RS10060 | nusA | 2112034..2113212 (+) | 1179 | WP_014614070.1 | transcription termination factor NusA | - |
| GAN19_RS10065 | - | 2113224..2113511 (+) | 288 | WP_014614069.1 | YlxR family protein | - |
| GAN19_RS10070 | - | 2113508..2113813 (+) | 306 | WP_014614068.1 | YlxQ family RNA-binding protein | - |
| GAN19_RS10075 | infB | 2113830..2115968 (+) | 2139 | WP_110161078.1 | translation initiation factor IF-2 | - |
| GAN19_RS10080 | - | 2116183..2116422 (+) | 240 | WP_014614066.1 | hypothetical protein | - |
| GAN19_RS10085 | rbfA | 2117167..2117511 (+) | 345 | WP_014614065.1 | 30S ribosome-binding factor RbfA | - |
| GAN19_RS10090 | truB | 2117596..2118513 (+) | 918 | WP_014614064.1 | tRNA pseudouridine(55) synthase TruB | - |
| GAN19_RS10095 | - | 2118528..2119499 (+) | 972 | WP_014614063.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| GAN19_RS10100 | rpsO | 2119600..2119869 (+) | 270 | WP_014614062.1 | 30S ribosomal protein S15 | - |
| GAN19_RS10105 | pnp | 2120028..2122121 (+) | 2094 | WP_015729052.1 | polyribonucleotide nucleotidyltransferase | - |
| GAN19_RS10110 | - | 2122631..2124304 (+) | 1674 | WP_014614059.1 | ribonuclease J | - |
| GAN19_RS10115 | - | 2124443..2126806 (+) | 2364 | WP_015729054.1 | DNA translocase FtsK | - |
| GAN19_RS10120 | - | 2126812..2127528 (+) | 717 | WP_014614057.1 | GntR family transcriptional regulator | - |
| GAN19_RS10125 | - | 2127562..2128836 (+) | 1275 | WP_037543167.1 | pitrilysin family protein | - |
| GAN19_RS10130 | - | 2128829..2130118 (+) | 1290 | WP_037543165.1 | pitrilysin family protein | - |
| GAN19_RS10135 | - | 2130115..2130819 (+) | 705 | WP_037543163.1 | SDR family oxidoreductase | - |
| GAN19_RS10140 | - | 2130876..2131721 (+) | 846 | WP_014614053.1 | DUF3388 domain-containing protein | - |
| GAN19_RS10145 | - | 2131740..2132135 (+) | 396 | WP_014614052.1 | helix-turn-helix domain-containing protein | - |
| GAN19_RS10150 | pgsA | 2132177..2132761 (+) | 585 | WP_096548680.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| GAN19_RS10155 | - | 2132982..2134157 (+) | 1176 | WP_110160836.1 | CinA family nicotinamide mononucleotide deamidase-related protein | - |
| GAN19_RS10160 | recA | 2134296..2135339 (+) | 1044 | WP_014614049.1 | recombinase RecA | Machinery gene |
| GAN19_RS10165 | rny | 2135566..2137125 (+) | 1560 | WP_014614047.1 | ribonuclease Y | - |
| GAN19_RS10170 | - | 2137248..2137466 (-) | 219 | WP_014614046.1 | hypothetical protein | - |
| GAN19_RS10175 | - | 2137664..2138044 (+) | 381 | WP_096535761.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| GAN19_RS10180 | - | 2138028..2140202 (+) | 2175 | WP_152162977.1 | heavy metal translocating P-type ATPase | - |
| GAN19_RS10185 | - | 2140533..2141327 (+) | 795 | WP_014614042.1 | TIGR00282 family metallophosphoesterase | - |
| GAN19_RS10190 | - | 2141480..2143240 (+) | 1761 | WP_037543155.1 | 2-oxoacid:acceptor oxidoreductase subunit alpha | - |
| GAN19_RS10195 | - | 2143241..2144107 (+) | 867 | WP_014614040.1 | 2-oxoacid:ferredoxin oxidoreductase subunit beta | - |
| GAN19_RS10200 | - | 2144366..2144665 (+) | 300 | WP_014614039.1 | MTH1187 family thiamine-binding protein | - |
| GAN19_RS10205 | miaB | 2144769..2146319 (+) | 1551 | WP_014614038.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| GAN19_RS10210 | - | 2146320..2146697 (+) | 378 | WP_014614037.1 | YlbF family regulator | - |
| GAN19_RS10215 | thiW | 2146752..2147261 (+) | 510 | WP_014614036.1 | energy coupling factor transporter S component ThiW | - |
| GAN19_RS10220 | mutS | 2148124..2150721 (+) | 2598 | WP_015729061.1 | DNA mismatch repair protein MutS | - |
| GAN19_RS10225 | mutL | 2150736..2152676 (+) | 1941 | WP_015729062.1 | DNA mismatch repair endonuclease MutL | - |
| GAN19_RS10230 | - | 2152688..2153221 (+) | 534 | WP_015729063.1 | glycerol-3-phosphate responsive antiterminator | - |
| GAN19_RS10235 | - | 2153249..2154277 (+) | 1029 | WP_015729064.1 | LD-carboxypeptidase | - |
| GAN19_RS10240 | - | 2154516..2155331 (+) | 816 | WP_014614031.1 | MIP/aquaporin family protein | - |
| GAN19_RS10245 | glpK | 2155627..2157129 (+) | 1503 | WP_070407552.1 | glycerol kinase GlpK | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 37942.97 Da Isoelectric Point: 5.0169
>NTDB_id=391724 GAN19_RS10160 WP_014614049.1 2134296..2135339(+) (recA) [Staphylococcus pseudintermedius strain KCTC 43134]
MDNERQKALDTVIKNMEKSFGKGAVMKLGENKDRRVSSVSSGSVTLDHALGVGGYPKGRIIEVYGPESSGKTTVALHAIA
EVQKNGGVAAFIDAEHALDPVYAEALGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIIIVDSVAALTPKAEIEGEMGD
THVGLQARLMSQALRKLSAAISKSKTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQDIVGNR
TKIKVVKNKVAPPFKVAEVDIMYGKGISREGELIDLGVQYDIVDKSGAWYSYNGERMGQGKENVKQFLLENPKLEDEIDR
KLREKLGIYDGDVEESEQEETQTLFDE
MDNERQKALDTVIKNMEKSFGKGAVMKLGENKDRRVSSVSSGSVTLDHALGVGGYPKGRIIEVYGPESSGKTTVALHAIA
EVQKNGGVAAFIDAEHALDPVYAEALGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIIIVDSVAALTPKAEIEGEMGD
THVGLQARLMSQALRKLSAAISKSKTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQDIVGNR
TKIKVVKNKVAPPFKVAEVDIMYGKGISREGELIDLGVQYDIVDKSGAWYSYNGERMGQGKENVKQFLLENPKLEDEIDR
KLREKLGIYDGDVEESEQEETQTLFDE
Nucleotide
Download Length: 1044 bp
>NTDB_id=391724 GAN19_RS10160 WP_014614049.1 2134296..2135339(+) (recA) [Staphylococcus pseudintermedius strain KCTC 43134]
TTGGATAATGAACGTCAAAAAGCGCTAGATACAGTAATTAAAAACATGGAAAAATCATTTGGTAAAGGTGCCGTAATGAA
ACTGGGCGAGAATAAAGATCGCCGTGTTTCAAGTGTTTCAAGTGGTTCGGTAACGCTAGACCATGCATTAGGGGTTGGCG
GCTATCCTAAAGGTCGTATCATCGAAGTTTATGGCCCCGAAAGTTCTGGTAAAACAACGGTTGCTTTACATGCCATTGCT
GAAGTACAAAAAAATGGCGGTGTTGCCGCATTTATTGATGCCGAACACGCACTCGATCCAGTTTACGCTGAAGCATTAGG
TGTAGATATTGATAACTTATACCTTTCACAACCAGACCACGGGGAACAAGGTCTTGAAATTGCAGAGGCGTTTGTCAGAA
GTGGCGCAGTGGATATTATCATTGTTGACTCAGTTGCGGCATTGACTCCTAAAGCTGAAATTGAAGGTGAAATGGGTGAT
ACGCATGTTGGTTTACAAGCGCGTTTAATGTCTCAAGCATTGCGTAAACTTTCTGCAGCCATTTCAAAATCAAAAACAAC
AGCTATCTTTATTAACCAAATTCGTGAAAAAGTAGGCGTTATGTTCGGTAACCCTGAAACGACACCAGGGGGCCGAGCTC
TGAAATTCTACAGCTCAGTTCGTTTAGAAGTGCGTCGTGCTGAACAATTGAAACAAGGTCAAGATATTGTAGGTAACCGT
ACTAAAATTAAAGTGGTTAAAAATAAAGTCGCACCACCATTCAAAGTCGCAGAAGTGGATATCATGTATGGTAAAGGGAT
TTCACGCGAAGGAGAATTGATTGATTTAGGTGTACAATACGACATCGTTGATAAATCAGGTGCTTGGTATTCATATAACG
GTGAGCGTATGGGTCAAGGTAAAGAGAATGTAAAACAATTTCTACTTGAAAACCCTAAACTTGAAGATGAAATTGACCGT
AAATTACGTGAAAAACTCGGCATTTATGATGGTGATGTAGAAGAATCTGAACAAGAAGAAACACAAACGCTTTTTGATGA
ATAA
TTGGATAATGAACGTCAAAAAGCGCTAGATACAGTAATTAAAAACATGGAAAAATCATTTGGTAAAGGTGCCGTAATGAA
ACTGGGCGAGAATAAAGATCGCCGTGTTTCAAGTGTTTCAAGTGGTTCGGTAACGCTAGACCATGCATTAGGGGTTGGCG
GCTATCCTAAAGGTCGTATCATCGAAGTTTATGGCCCCGAAAGTTCTGGTAAAACAACGGTTGCTTTACATGCCATTGCT
GAAGTACAAAAAAATGGCGGTGTTGCCGCATTTATTGATGCCGAACACGCACTCGATCCAGTTTACGCTGAAGCATTAGG
TGTAGATATTGATAACTTATACCTTTCACAACCAGACCACGGGGAACAAGGTCTTGAAATTGCAGAGGCGTTTGTCAGAA
GTGGCGCAGTGGATATTATCATTGTTGACTCAGTTGCGGCATTGACTCCTAAAGCTGAAATTGAAGGTGAAATGGGTGAT
ACGCATGTTGGTTTACAAGCGCGTTTAATGTCTCAAGCATTGCGTAAACTTTCTGCAGCCATTTCAAAATCAAAAACAAC
AGCTATCTTTATTAACCAAATTCGTGAAAAAGTAGGCGTTATGTTCGGTAACCCTGAAACGACACCAGGGGGCCGAGCTC
TGAAATTCTACAGCTCAGTTCGTTTAGAAGTGCGTCGTGCTGAACAATTGAAACAAGGTCAAGATATTGTAGGTAACCGT
ACTAAAATTAAAGTGGTTAAAAATAAAGTCGCACCACCATTCAAAGTCGCAGAAGTGGATATCATGTATGGTAAAGGGAT
TTCACGCGAAGGAGAATTGATTGATTTAGGTGTACAATACGACATCGTTGATAAATCAGGTGCTTGGTATTCATATAACG
GTGAGCGTATGGGTCAAGGTAAAGAGAATGTAAAACAATTTCTACTTGAAAACCCTAAACTTGAAGATGAAATTGACCGT
AAATTACGTGAAAAACTCGGCATTTATGATGGTGATGTAGAAGAATCTGAACAAGAAGAAACACAAACGCTTTTTGATGA
ATAA
Similar proteins
Only experimentally validated proteins are listed.