Detailed information NTG0388012

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: LH500_RS05685
• Genome accession: NZ_CP044119
• Coordinates: 1176924..1178066 (+)
• Length: 380 a.a.
• NCBI ID: WP_004561373.1
• Uniprot ID: C0XLC5
• Organism: Lentilactobacillus hilgardii strain LH500
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1171924..1183066

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LH500_RS05665 (LH500_05665)	yfmH	1173058..1174341 (+)	1284	WP_004561369.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
LH500_RS05670 (LH500_05670)	-	1174426..1175490 (+)	1065	WP_004561370.1	RodZ family helix-turn-helix domain-containing protein	-
LH500_RS05675 (LH500_05675)	pgsA	1175515..1176096 (+)	582	WP_003553659.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
LH500_RS05680 (LH500_05680)	cinA	1176351..1176827 (+)	477	WP_003553661.1	CinA family protein	Machinery gene
LH500_RS05685 (LH500_05685)	recA	1176924..1178066 (+)	1143	WP_004561373.1	recombinase RecA	Machinery gene
LH500_RS05690 (LH500_05690)	rny	1178372..1179955 (+)	1584	WP_040472712.1	ribonuclease Y	-
LH500_RS05695 (LH500_05695)	-	1180044..1180844 (+)	801	WP_004561377.1	TIGR00282 family metallophosphoesterase	-

Sequence

Protein

• Length: 380 a.a.
• Molecular weight: 41159.54 Da
• Isoelectric Point: 6.5284

>NTDB_id=388012 LH500_RS05685 WP_004561373.1 1176924..1178066(+) (recA) [Lentilactobacillus hilgardii strain LH500]
MADQRKVALDKALKSIEKEFGKGSIMRMGDKADTQISTIPTGSLALDEALGVGGYPRGRIVEVYGPESSGKTTVALHAVA
EVQKRGGTAAYIDAENALDPVYATHLGVNIDDLLLSQPDTGEQGLQITDTLVTSGAIDIVVIDSVAALVPRAEIEGEMGD
THVGLQARLMSQALRKLSGTISKTKTIAIFINQIREKVGVMFGNPETTPGGRALKFYATIRLEIRRAEQIKNGTNIIGNR
VRIKVVKNKVAPPFKRAEVDIMYGKGISQSGELVDMAVDKDIIDKSGSWYSYGEERIGQGRENAKGYLEEHQDMYKEVER
KVRDAYGIPDDADTGNSTKDSSNDDKGTNKKTSDKKTEKPVKTADSNSKSVDNIDLNIGK

Nucleotide

• Length: 1143 bp

>NTDB_id=388012 LH500_RS05685 WP_004561373.1 1176924..1178066(+) (recA) [Lentilactobacillus hilgardii strain LH500]
ATGGCTGACCAAAGAAAAGTTGCCTTGGATAAGGCGCTAAAAAGTATTGAAAAAGAATTCGGTAAGGGTTCAATTATGCG
TATGGGTGATAAGGCCGATACACAAATTTCAACAATTCCAACTGGTTCCCTGGCTTTGGATGAAGCACTTGGGGTTGGTG
GCTATCCGCGTGGCCGAATCGTTGAGGTTTACGGCCCGGAAAGTTCGGGTAAAACAACCGTTGCTTTACACGCGGTTGCG
GAAGTTCAAAAGCGTGGTGGAACGGCCGCTTATATTGATGCCGAAAATGCACTTGATCCAGTTTATGCAACTCATCTTGG
TGTTAATATTGATGATCTGTTATTATCACAACCGGATACTGGCGAACAGGGTCTCCAAATTACCGATACCTTGGTCACCA
GTGGTGCAATTGATATTGTTGTAATTGATTCAGTTGCTGCGTTGGTTCCACGTGCGGAAATCGAAGGTGAAATGGGCGAT
ACCCACGTTGGCCTTCAAGCTCGTTTGATGTCCCAAGCGTTAAGAAAATTGTCGGGTACGATTAGTAAAACAAAGACAAT
CGCAATTTTTATTAATCAGATTCGTGAAAAAGTCGGTGTCATGTTTGGAAATCCCGAAACAACACCTGGCGGTCGTGCGC
TAAAATTTTACGCGACAATTAGGCTCGAAATTCGACGAGCTGAACAAATTAAAAATGGCACTAATATTATTGGTAATCGT
GTTCGGATTAAAGTTGTCAAGAACAAGGTTGCACCGCCATTTAAACGTGCAGAAGTCGATATCATGTATGGTAAAGGTAT
TTCCCAGTCCGGTGAGTTGGTTGATATGGCTGTTGATAAAGATATTATTGATAAGTCCGGCTCTTGGTATTCATATGGTG
AGGAACGAATTGGCCAGGGGCGTGAAAATGCTAAGGGCTATTTGGAAGAACACCAAGATATGTACAAAGAGGTCGAGAGA
AAAGTCCGTGATGCTTATGGCATACCAGACGATGCGGATACTGGCAACTCGACTAAAGATAGTTCAAATGATGATAAGGG
TACAAATAAAAAAACAAGCGACAAAAAGACTGAAAAACCTGTCAAAACTGCCGATTCCAACTCAAAATCAGTCGATAATA
TTGATTTAAATATTGGAAAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (8-268)

3D structure

• AlphaFold DB: C0XLC5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	83.841	86.316	0.724
recA	Bacillus subtilis subsp. subtilis str. 168	72.81	87.105	0.634
recA	Streptococcus pneumoniae D39	63.215	96.579	0.611
recA	Streptococcus pneumoniae Rx1	63.215	96.579	0.611
recA	Streptococcus pneumoniae R6	63.215	96.579	0.611
recA	Streptococcus pneumoniae TIGR4	63.215	96.579	0.611
recA	Streptococcus mutans UA159	64.023	92.895	0.595
recA	Lactococcus lactis subsp. cremoris KW2	67.463	88.158	0.595
recA	Streptococcus pyogenes NZ131	67.771	87.368	0.592
recA	Streptococcus mitis NCTC 12261	63.38	93.421	0.592
recA	Streptococcus mitis SK321	65.497	90	0.589
recA	Neisseria gonorrhoeae MS11	62.31	86.579	0.539
recA	Neisseria gonorrhoeae MS11	62.31	86.579	0.539
recA	Neisseria gonorrhoeae strain FA1090	62.31	86.579	0.539
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.846	85.526	0.529
recA	Ralstonia pseudosolanacearum GMI1000	63.578	82.368	0.524
recA	Vibrio cholerae strain A1552	57.558	90.526	0.521
recA	Vibrio cholerae O1 biovar El Tor strain E7946	57.558	90.526	0.521
recA	Pseudomonas stutzeri DSM 10701	60.991	85	0.518
recA	Acinetobacter baylyi ADP1	60.802	85.263	0.518
recA	Acinetobacter baumannii D1279779	60.494	85.263	0.516
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.756	86.316	0.516
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.574	86.579	0.516
recA	Glaesserella parasuis strain SC1401	56.851	90.263	0.513
recA	Helicobacter pylori strain NCTC11637	58.282	85.789	0.5
recA	Helicobacter pylori 26695	58.282	85.789	0.5