Detailed information
Bioinformatically predicted
Overview
| Name | cinA | Type | Machinery gene |
| Locus tag | LH500_RS05680 | Genome accession | NZ_CP044119 |
| Coordinates | 1176351..1176827 (+) | Length | 158 a.a. |
| NCBI ID | WP_003553661.1 | Uniprot ID | C0XLC4 |
| Organism | Lentilactobacillus hilgardii strain LH500 | ||
| Function | facilitate localization of RecA (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1171351..1181827
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LH500_RS05660 (LH500_05660) | yfmF | 1171794..1173074 (+) | 1281 | WP_004561367.1 | EF-P 5-aminopentanol modification-associated protein YfmF | - |
| LH500_RS05665 (LH500_05665) | yfmH | 1173058..1174341 (+) | 1284 | WP_004561369.1 | EF-P 5-aminopentanol modification-associated protein YfmH | - |
| LH500_RS05670 (LH500_05670) | - | 1174426..1175490 (+) | 1065 | WP_004561370.1 | RodZ family helix-turn-helix domain-containing protein | - |
| LH500_RS05675 (LH500_05675) | pgsA | 1175515..1176096 (+) | 582 | WP_003553659.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| LH500_RS05680 (LH500_05680) | cinA | 1176351..1176827 (+) | 477 | WP_003553661.1 | CinA family protein | Machinery gene |
| LH500_RS05685 (LH500_05685) | recA | 1176924..1178066 (+) | 1143 | WP_004561373.1 | recombinase RecA | Machinery gene |
| LH500_RS05690 (LH500_05690) | rny | 1178372..1179955 (+) | 1584 | WP_040472712.1 | ribonuclease Y | - |
| LH500_RS05695 (LH500_05695) | - | 1180044..1180844 (+) | 801 | WP_004561377.1 | TIGR00282 family metallophosphoesterase | - |
Sequence
Protein
Download Length: 158 a.a. Molecular weight: 16992.50 Da Isoelectric Point: 5.6770
>NTDB_id=388011 LH500_RS05680 WP_003553661.1 1176351..1176827(+) (cinA) [Lentilactobacillus hilgardii strain LH500]
MSLEQKLVEQLLKKHITITAAESLTAGLFQSTLGNVSGVSKVFEGGFVTYSDKVKEQLLHVPHDVIAENSVVSEPTAIWM
ADQARRIMDKDLAVSFTGVAGPDALEGNPVGTVWIGIAFGAQISYAKKFQFEGLRNQIREAAVEAGLKMALSAITSDK
MSLEQKLVEQLLKKHITITAAESLTAGLFQSTLGNVSGVSKVFEGGFVTYSDKVKEQLLHVPHDVIAENSVVSEPTAIWM
ADQARRIMDKDLAVSFTGVAGPDALEGNPVGTVWIGIAFGAQISYAKKFQFEGLRNQIREAAVEAGLKMALSAITSDK
Nucleotide
Download Length: 477 bp
>NTDB_id=388011 LH500_RS05680 WP_003553661.1 1176351..1176827(+) (cinA) [Lentilactobacillus hilgardii strain LH500]
TTGTCACTTGAACAAAAACTGGTTGAGCAATTATTGAAGAAGCATATTACAATTACTGCTGCAGAAAGTCTAACTGCTGG
GCTGTTTCAGAGCACATTGGGGAATGTTTCCGGTGTTTCAAAGGTTTTTGAAGGGGGATTTGTCACGTATTCTGATAAAG
TTAAGGAACAGTTGCTACATGTTCCTCACGATGTTATTGCTGAAAACAGTGTTGTTAGTGAACCAACGGCTATCTGGATG
GCAGATCAAGCAAGACGAATCATGGATAAAGACTTAGCGGTTTCCTTCACGGGGGTTGCCGGTCCAGATGCCTTGGAAGG
CAATCCTGTCGGAACGGTTTGGATCGGAATTGCTTTTGGGGCACAAATTAGTTATGCTAAAAAATTCCAGTTTGAAGGAT
TACGTAATCAAATTCGTGAAGCTGCCGTTGAGGCTGGATTAAAAATGGCATTATCCGCTATTACGAGTGACAAATAA
TTGTCACTTGAACAAAAACTGGTTGAGCAATTATTGAAGAAGCATATTACAATTACTGCTGCAGAAAGTCTAACTGCTGG
GCTGTTTCAGAGCACATTGGGGAATGTTTCCGGTGTTTCAAAGGTTTTTGAAGGGGGATTTGTCACGTATTCTGATAAAG
TTAAGGAACAGTTGCTACATGTTCCTCACGATGTTATTGCTGAAAACAGTGTTGTTAGTGAACCAACGGCTATCTGGATG
GCAGATCAAGCAAGACGAATCATGGATAAAGACTTAGCGGTTTCCTTCACGGGGGTTGCCGGTCCAGATGCCTTGGAAGG
CAATCCTGTCGGAACGGTTTGGATCGGAATTGCTTTTGGGGCACAAATTAGTTATGCTAAAAAATTCCAGTTTGAAGGAT
TACGTAATCAAATTCGTGAAGCTGCCGTTGAGGCTGGATTAAAAATGGCATTATCCGCTATTACGAGTGACAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| cinA | Streptococcus pneumoniae Rx1 |
49.682 |
99.367 |
0.494 |
| cinA | Streptococcus pneumoniae R6 |
49.682 |
99.367 |
0.494 |
| cinA | Streptococcus pneumoniae D39 |
49.682 |
99.367 |
0.494 |
| cinA | Streptococcus pneumoniae TIGR4 |
49.045 |
99.367 |
0.487 |
| cinA | Streptococcus mitis NCTC 12261 |
46.497 |
99.367 |
0.462 |
| cinA | Streptococcus mitis SK321 |
56.41 |
74.051 |
0.418 |
| cinA | Streptococcus mutans UA159 |
51.282 |
74.051 |
0.38 |
| cinA | Bacillus subtilis subsp. subtilis str. 168 |
39.333 |
94.937 |
0.373 |