Detailed information NTG0379370

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: GmarT_RS06025
• Genome accession: NZ_CP042910
• Coordinates: 1587584..1588600 (-)
• Length: 338 a.a.
• NCBI ID: WP_230682564.1
• Uniprot ID: -
• Organism: Gimesia maris strain DSM 8797
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1582584..1593600

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GmarT_RS06015 (GmarT_12490)	alaS	1583156..1585783 (-)	2628	WP_002649163.1	alanine--tRNA ligase	-
GmarT_RS06020 (GmarT_12500)	-	1585780..1587345 (-)	1566	WP_187782346.1	S1C family serine protease	-
GmarT_RS06025 (GmarT_12510)	recA	1587584..1588600 (-)	1017	WP_230682564.1	recombinase RecA	Machinery gene
GmarT_RS29405 (GmarT_12520)	cyaB	1588958..1589524 (-)	567	WP_002649159.1	class IV adenylate cyclase	-
GmarT_RS06035 (GmarT_12530)	-	1589583..1591247 (-)	1665	WP_002649158.1	multiheme c-type cytochrome	-
GmarT_RS06040 (GmarT_12540)	-	1591434..1592696 (-)	1263	WP_002649157.1	DUF1573 domain-containing protein	-

Sequence

Protein

• Length: 338 a.a.
• Molecular weight: 36198.77 Da
• Isoelectric Point: 5.8842

>NTDB_id=379370 GmarT_RS06025 WP_230682564.1 1587584..1588600(-) (recA) [Gimesia maris strain DSM 8797]
MLKNALGQIEQAFGRGAIMKLTGANARSVPSIASGALSLDLALGGAGFPRGRIIELYGPESSGKTTLALHVIANAQKEGG
IAAFIDAEHALDPVWAKKLGVNISELLVSQPTYGEEGLQIAEMLIKSNSVDVIVVDSVAALVPKAELDGEIGDTHVGLQA
RMMSQAMRKLTGAISKSKTTVIFINQIREKIGVMFGSPETTPGGRALKFYSSVRVDVRRIATLKDGDTVTGIRMKAKIVK
NKIAPPFRIAEFDMLTTGGINYELDLLDLAVENKIVKKSGSWFSYGELRLGQGRDKSKVVLEENPDICEEIKQKVLAAQG
VVPTPEEESEPETEAVEA

Nucleotide

• Length: 1017 bp

>NTDB_id=379370 GmarT_RS06025 WP_230682564.1 1587584..1588600(-) (recA) [Gimesia maris strain DSM 8797]
ATGCTGAAAAACGCTCTGGGACAAATTGAACAGGCCTTTGGCAGAGGCGCGATTATGAAACTGACGGGCGCAAATGCCCG
GTCTGTTCCCTCAATTGCCAGTGGTGCACTTTCACTCGACCTGGCACTGGGAGGTGCCGGATTTCCGCGAGGTCGTATCA
TCGAACTTTACGGGCCTGAATCGAGTGGTAAAACCACGCTCGCACTGCACGTGATTGCCAATGCTCAGAAAGAGGGAGGC
ATTGCCGCGTTCATCGACGCCGAACACGCACTCGATCCGGTCTGGGCAAAAAAACTGGGGGTCAACATTTCCGAACTGCT
CGTCAGTCAGCCAACCTATGGCGAAGAAGGCCTGCAGATTGCCGAAATGCTGATCAAATCGAACTCGGTGGATGTCATCG
TAGTCGATTCCGTCGCCGCCCTGGTTCCTAAAGCGGAACTGGACGGGGAAATCGGAGATACACACGTGGGCCTGCAGGCC
CGCATGATGAGCCAGGCGATGCGAAAACTGACTGGCGCCATTTCCAAATCGAAAACAACAGTGATTTTCATTAACCAGAT
CCGTGAAAAGATCGGCGTCATGTTCGGCAGCCCCGAAACGACCCCCGGCGGTCGCGCACTGAAATTCTATAGTTCGGTAC
GTGTGGATGTCCGCCGGATTGCCACGCTGAAAGACGGGGATACTGTGACCGGTATTCGCATGAAAGCCAAGATTGTCAAA
AACAAAATCGCGCCCCCCTTCCGGATCGCGGAATTTGACATGCTCACAACAGGCGGAATTAATTACGAGCTGGATCTGCT
GGACCTGGCAGTCGAAAACAAAATCGTCAAGAAGAGTGGCAGCTGGTTCAGCTACGGCGAATTACGACTGGGACAAGGGC
GTGACAAATCCAAAGTCGTGCTCGAAGAAAACCCGGATATCTGTGAGGAAATCAAACAGAAAGTTCTGGCGGCACAAGGA
GTCGTCCCCACTCCCGAAGAAGAGTCCGAACCGGAAACAGAGGCTGTCGAAGCCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (2-261)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Bacillus subtilis subsp. subtilis str. 168	63.438	94.675	0.601
recA	Lactococcus lactis subsp. cremoris KW2	61.398	97.337	0.598
recA	Streptococcus pneumoniae TIGR4	58.754	99.704	0.586
recA	Streptococcus pneumoniae Rx1	58.754	99.704	0.586
recA	Streptococcus pneumoniae R6	58.754	99.704	0.586
recA	Streptococcus pneumoniae D39	58.754	99.704	0.586
recA	Streptococcus mitis NCTC 12261	57.059	100	0.574
recA	Streptococcus mitis SK321	57.227	100	0.574
recA	Latilactobacillus sakei subsp. sakei 23K	57.958	98.521	0.571
recA	Streptococcus mutans UA159	55.977	100	0.568
recA	Neisseria gonorrhoeae strain FA1090	57.447	97.337	0.559
recA	Neisseria gonorrhoeae MS11	57.447	97.337	0.559
recA	Neisseria gonorrhoeae MS11	57.447	97.337	0.559
recA	Pseudomonas stutzeri DSM 10701	59.494	93.491	0.556
recA	Acinetobacter baumannii D1279779	55.49	99.704	0.553
recA	Acinetobacter baylyi ADP1	54.839	100	0.553
recA	Streptococcus pyogenes NZ131	58.805	94.083	0.553
recA	Ralstonia pseudosolanacearum GMI1000	59.365	93.195	0.553
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.255	94.97	0.553
recA	Vibrio cholerae O1 biovar El Tor strain E7946	59.236	92.899	0.55
recA	Vibrio cholerae strain A1552	59.236	92.899	0.55
recA	Helicobacter pylori 26695	56.193	97.929	0.55
recA	Helicobacter pylori strain NCTC11637	55.891	97.929	0.547
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	57.5	94.675	0.544
recA	Glaesserella parasuis strain SC1401	57.325	92.899	0.533
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	56.289	94.083	0.53