Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | FED53_RS06670 | Genome accession | NZ_CP040367 |
| Coordinates | 1175873..1176910 (+) | Length | 345 a.a. |
| NCBI ID | WP_025908597.1 | Uniprot ID | A0A1N6NUD0 |
| Organism | Priestia flexa isolate 1-2-1 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1161495..1206806 | 1175873..1176910 | within | 0 |
Gene organization within MGE regions
Location: 1161495..1206806
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FED53_RS06605 (FED53_06605) | - | 1161639..1162364 (+) | 726 | WP_025908584.1 | GntR family transcriptional regulator | - |
| FED53_RS06610 (FED53_06610) | - | 1162493..1163572 (+) | 1080 | WP_100346939.1 | BMP family lipoprotein | - |
| FED53_RS06615 (FED53_06615) | - | 1163698..1165227 (+) | 1530 | WP_100346940.1 | ABC transporter ATP-binding protein | - |
| FED53_RS06620 (FED53_06620) | - | 1165221..1166282 (+) | 1062 | WP_025908587.1 | ABC transporter permease | - |
| FED53_RS06625 (FED53_06625) | - | 1166279..1167238 (+) | 960 | WP_025908588.1 | ABC transporter permease | - |
| FED53_RS06630 (FED53_06630) | yfmF | 1167862..1169157 (+) | 1296 | WP_138116700.1 | EF-P 5-aminopentanol modification-associated protein YfmF | - |
| FED53_RS06635 (FED53_06635) | yfmH | 1169144..1170427 (+) | 1284 | WP_025908590.1 | EF-P 5-aminopentanol modification-associated protein YfmH | - |
| FED53_RS06640 (FED53_06640) | ymfI | 1170498..1171223 (+) | 726 | WP_061785725.1 | elongation factor P 5-aminopentanone reductase | - |
| FED53_RS06645 (FED53_06645) | - | 1171290..1171550 (+) | 261 | WP_061785726.1 | DUF3243 domain-containing protein | - |
| FED53_RS06650 (FED53_06650) | - | 1171930..1172736 (+) | 807 | WP_090752669.1 | DUF3388 domain-containing protein | - |
| FED53_RS06655 (FED53_06655) | - | 1172749..1173696 (+) | 948 | WP_225002363.1 | helix-turn-helix domain-containing protein | - |
| FED53_RS06660 (FED53_06660) | pgsA | 1173784..1174368 (+) | 585 | WP_025908595.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| FED53_RS06665 (FED53_06665) | cinA | 1174382..1175620 (+) | 1239 | WP_138116701.1 | competence/damage-inducible protein A | Machinery gene |
| FED53_RS06670 (FED53_06670) | recA | 1175873..1176910 (+) | 1038 | WP_025908597.1 | recombinase RecA | Machinery gene |
| FED53_RS06675 (FED53_06675) | rny | 1177192..1178751 (+) | 1560 | WP_025908598.1 | ribonuclease Y | - |
| FED53_RS06680 (FED53_06680) | - | 1178811..1179608 (+) | 798 | WP_025908599.1 | TIGR00282 family metallophosphoesterase | - |
| FED53_RS06685 (FED53_06685) | spoVS | 1179843..1180103 (+) | 261 | WP_003181955.1 | stage V sporulation protein SpoVS | - |
| FED53_RS06690 (FED53_06690) | - | 1180182..1181096 (+) | 915 | WP_061785728.1 | dipeptidase | - |
| FED53_RS06695 (FED53_06695) | - | 1181276..1183033 (+) | 1758 | WP_025908601.1 | 2-oxoacid:acceptor oxidoreductase subunit alpha | - |
| FED53_RS06700 (FED53_06700) | - | 1183020..1183886 (+) | 867 | WP_025908602.1 | 2-oxoacid:ferredoxin oxidoreductase subunit beta | - |
| FED53_RS06705 (FED53_06705) | tdh | 1184336..1185379 (+) | 1044 | WP_078989382.1 | L-threonine 3-dehydrogenase | - |
| FED53_RS06710 (FED53_06710) | - | 1185399..1186577 (+) | 1179 | WP_138116702.1 | glycine C-acetyltransferase | - |
| FED53_RS06715 (FED53_06715) | miaB | 1186807..1188336 (+) | 1530 | WP_025908606.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| FED53_RS06720 (FED53_06720) | - | 1188338..1188769 (+) | 432 | WP_061785716.1 | RicAFT regulatory complex protein RicA family protein | - |
| FED53_RS06725 (FED53_06725) | - | 1188968..1189513 (+) | 546 | WP_025908608.1 | outer spore coat protein CotE | - |
| FED53_RS06730 (FED53_06730) | mutS | 1189650..1192298 (+) | 2649 | WP_138116703.1 | DNA mismatch repair protein MutS | - |
| FED53_RS06735 (FED53_06735) | mutL | 1192318..1194219 (+) | 1902 | WP_138116704.1 | DNA mismatch repair endonuclease MutL | - |
| FED53_RS06740 (FED53_06740) | - | 1194458..1194976 (+) | 519 | WP_138116705.1 | hypothetical protein | - |
| FED53_RS06745 (FED53_06745) | miaA | 1195419..1196369 (+) | 951 | WP_076513904.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA | - |
| FED53_RS06750 (FED53_06750) | hfq | 1196404..1196628 (+) | 225 | WP_025908613.1 | RNA chaperone Hfq | - |
| FED53_RS06755 (FED53_06755) | spoVK | 1196884..1197819 (+) | 936 | WP_237071984.1 | stage V sporulation protein K | - |
| FED53_RS06760 (FED53_06760) | - | 1197850..1198461 (-) | 612 | WP_061785712.1 | trimeric intracellular cation channel family protein | - |
| FED53_RS06765 (FED53_06765) | hflX | 1198712..1199974 (+) | 1263 | WP_025908616.1 | GTPase HflX | - |
| FED53_RS06770 (FED53_06770) | - | 1199990..1201252 (+) | 1263 | WP_025908617.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| FED53_RS06775 (FED53_06775) | - | 1201445..1201867 (+) | 423 | WP_025908618.1 | MerR family transcriptional regulator | - |
| FED53_RS06780 (FED53_06780) | glnA | 1201949..1203283 (+) | 1335 | WP_025908619.1 | type I glutamate--ammonia ligase | - |
| FED53_RS06785 (FED53_06785) | - | 1203386..1204576 (-) | 1191 | WP_025908620.1 | tyrosine-type recombinase/integrase | - |
| FED53_RS06790 (FED53_06790) | - | 1204589..1205101 (-) | 513 | WP_062686188.1 | ImmA/IrrE family metallo-endopeptidase | - |
| FED53_RS06795 (FED53_06795) | - | 1205182..1205775 (-) | 594 | WP_138116706.1 | hypothetical protein | - |
| FED53_RS06800 (FED53_06800) | - | 1205789..1206415 (-) | 627 | WP_138116707.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 37498.53 Da Isoelectric Point: 4.7775
>NTDB_id=363693 FED53_RS06670 WP_025908597.1 1175873..1176910(+) (recA) [Priestia flexa isolate 1-2-1]
MNDRQAALDMALKQIEKQFGKGSIMKLGEQTERKISTVSSGSLALDVALGVGGYPRGRIIEVYGPESSGKTTVALHAIAE
VQQQGGQAAFIDAEHALDPVYAQKLGVDIDELLLSQPDTGEQALEIAEALVRSGAVDILVIDSVAALVPKAEIEGEMGDS
HVGLQARLMSQALRKLSGAINKSKTIAVFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGNDIVGNKT
RIKVVKNKVAPPFRAAEVDIMYGEGISKEGEILDIASDLDIVQKSGAWYSYNEERLGQGRENAKQFLKENVDIRQEIAGQ
VREYHGLDEAAEQMPEDDAQDELKI
MNDRQAALDMALKQIEKQFGKGSIMKLGEQTERKISTVSSGSLALDVALGVGGYPRGRIIEVYGPESSGKTTVALHAIAE
VQQQGGQAAFIDAEHALDPVYAQKLGVDIDELLLSQPDTGEQALEIAEALVRSGAVDILVIDSVAALVPKAEIEGEMGDS
HVGLQARLMSQALRKLSGAINKSKTIAVFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGNDIVGNKT
RIKVVKNKVAPPFRAAEVDIMYGEGISKEGEILDIASDLDIVQKSGAWYSYNEERLGQGRENAKQFLKENVDIRQEIAGQ
VREYHGLDEAAEQMPEDDAQDELKI
Nucleotide
Download Length: 1038 bp
>NTDB_id=363693 FED53_RS06670 WP_025908597.1 1175873..1176910(+) (recA) [Priestia flexa isolate 1-2-1]
GTGAACGATCGTCAAGCAGCCCTTGATATGGCTCTAAAACAAATTGAAAAGCAATTCGGTAAAGGTTCAATTATGAAATT
AGGAGAACAAACGGAACGTAAAATTTCAACGGTGTCTAGTGGTTCTCTAGCGTTAGATGTTGCGCTTGGTGTAGGTGGGT
ATCCACGCGGACGTATTATTGAAGTTTATGGTCCAGAAAGCTCTGGTAAAACAACAGTTGCGCTTCATGCAATTGCAGAA
GTACAGCAGCAGGGTGGACAAGCAGCGTTTATCGATGCTGAGCATGCGTTAGACCCGGTGTATGCACAAAAGTTGGGTGT
CGATATTGACGAGCTTCTTTTATCACAGCCTGATACAGGTGAACAAGCACTTGAAATTGCTGAAGCGTTAGTTCGTAGTG
GAGCAGTTGACATTCTGGTTATTGACTCTGTTGCAGCCCTTGTGCCTAAGGCTGAAATTGAAGGTGAAATGGGAGATTCT
CACGTTGGTTTACAAGCTCGTTTAATGTCTCAAGCACTTCGTAAGCTATCAGGTGCTATTAATAAGTCGAAAACAATTGC
TGTTTTCATTAACCAAATTCGTGAAAAAGTTGGCGTTATGTTTGGTAACCCTGAAACAACGCCAGGTGGACGTGCGCTTA
AGTTCTATTCTTCAGTGCGCCTTGAAGTTCGTCGTGCTGAGCAGTTGAAGCAAGGTAACGATATTGTAGGAAACAAGACA
AGAATTAAAGTTGTCAAAAACAAAGTAGCACCACCATTCCGCGCAGCTGAAGTGGATATTATGTACGGAGAAGGAATCTC
AAAAGAAGGAGAAATTTTAGATATTGCTTCTGATTTAGATATCGTACAAAAAAGTGGAGCTTGGTATTCTTATAACGAAG
AACGTTTAGGTCAAGGCCGTGAGAATGCGAAGCAGTTCCTAAAAGAAAATGTTGATATTCGTCAAGAAATTGCTGGCCAA
GTTCGTGAATATCATGGATTAGACGAAGCGGCAGAGCAAATGCCTGAAGACGATGCTCAAGATGAATTGAAAATTTAA
GTGAACGATCGTCAAGCAGCCCTTGATATGGCTCTAAAACAAATTGAAAAGCAATTCGGTAAAGGTTCAATTATGAAATT
AGGAGAACAAACGGAACGTAAAATTTCAACGGTGTCTAGTGGTTCTCTAGCGTTAGATGTTGCGCTTGGTGTAGGTGGGT
ATCCACGCGGACGTATTATTGAAGTTTATGGTCCAGAAAGCTCTGGTAAAACAACAGTTGCGCTTCATGCAATTGCAGAA
GTACAGCAGCAGGGTGGACAAGCAGCGTTTATCGATGCTGAGCATGCGTTAGACCCGGTGTATGCACAAAAGTTGGGTGT
CGATATTGACGAGCTTCTTTTATCACAGCCTGATACAGGTGAACAAGCACTTGAAATTGCTGAAGCGTTAGTTCGTAGTG
GAGCAGTTGACATTCTGGTTATTGACTCTGTTGCAGCCCTTGTGCCTAAGGCTGAAATTGAAGGTGAAATGGGAGATTCT
CACGTTGGTTTACAAGCTCGTTTAATGTCTCAAGCACTTCGTAAGCTATCAGGTGCTATTAATAAGTCGAAAACAATTGC
TGTTTTCATTAACCAAATTCGTGAAAAAGTTGGCGTTATGTTTGGTAACCCTGAAACAACGCCAGGTGGACGTGCGCTTA
AGTTCTATTCTTCAGTGCGCCTTGAAGTTCGTCGTGCTGAGCAGTTGAAGCAAGGTAACGATATTGTAGGAAACAAGACA
AGAATTAAAGTTGTCAAAAACAAAGTAGCACCACCATTCCGCGCAGCTGAAGTGGATATTATGTACGGAGAAGGAATCTC
AAAAGAAGGAGAAATTTTAGATATTGCTTCTGATTTAGATATCGTACAAAAAAGTGGAGCTTGGTATTCTTATAACGAAG
AACGTTTAGGTCAAGGCCGTGAGAATGCGAAGCAGTTCCTAAAAGAAAATGTTGATATTCGTCAAGAAATTGCTGGCCAA
GTTCGTGAATATCATGGATTAGACGAAGCGGCAGAGCAAATGCCTGAAGACGATGCTCAAGATGAATTGAAAATTTAA
Similar proteins
Only experimentally validated proteins are listed.