Detailed information NTG0347806

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: Pan110_RS05945
• Genome accession: NZ_CP036277
• Coordinates: 1590475..1591557 (-)
• Length: 360 a.a.
• NCBI ID: WP_145105039.1
• Uniprot ID: A0A517Q2X5
• Organism: Gimesia panareensis strain Pan110
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1585475..1596557

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Pan110_RS05935 (Pan110_12340)	alaS	1586039..1588666 (-)	2628	WP_145105035.1	alanine--tRNA ligase	-
Pan110_RS05940 (Pan110_12350)	-	1588673..1590274 (-)	1602	WP_197996414.1	trypsin-like peptidase domain-containing protein	-
Pan110_RS05945 (Pan110_12360)	recA	1590475..1591557 (-)	1083	WP_145105039.1	recombinase RecA	Machinery gene
Pan110_RS05950 (Pan110_12370)	cyaB	1591846..1592412 (-)	567	WP_145105041.1	class IV adenylate cyclase	-
Pan110_RS05955 (Pan110_12380)	-	1592470..1594158 (-)	1689	WP_197996415.1	multiheme c-type cytochrome	-
Pan110_RS05960 (Pan110_12390)	-	1594361..1595602 (-)	1242	WP_145105045.1	DUF1573 domain-containing protein	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 38464.22 Da
• Isoelectric Point: 7.3608

>NTDB_id=347806 Pan110_RS05945 WP_145105039.1 1590475..1591557(-) (recA) [Gimesia panareensis strain Pan110]
MAAKARSKRAATPPAPSSNGTNDSEGMLKNALGQIEQAFGKGSIMKLTGENARAVPSIASGALSLDLALGGHGFPRGRII
ELYGPESSGKTTLALHVIANAQKEGGIAAFIDAEHALDPVWAKKLGVNISELLVSQPTYGEEGLQIAEMLIKSNSVDVIV
VDSVAALVPKAELDGEIGDSHVGLQARMMSQAMRKLTGAISKSKTTVIFINQIREKIGVMFGSPETTPGGRALKFYSSVR
VDVRRIATLKDGDTVTGIRMKAKIVKNKIAPPFRIAEFDMLSTGGINFELDLLDLAVENKIVKKSGSWFSYGETRLGQGR
DRSKTVLEENPELCQEIKQKVLEAQGLVPVTEEEPEAVEA

Nucleotide

• Length: 1083 bp

>NTDB_id=347806 Pan110_RS05945 WP_145105039.1 1590475..1591557(-) (recA) [Gimesia panareensis strain Pan110]
ATGGCCGCAAAAGCAAGATCAAAACGAGCCGCCACTCCCCCCGCTCCCAGCAGTAACGGAACCAACGATTCCGAAGGGAT
GCTCAAGAACGCCCTGGGACAAATCGAACAGGCGTTTGGTAAAGGCTCCATCATGAAACTGACCGGGGAAAACGCTCGCG
CAGTCCCCTCGATTGCCAGTGGTGCCCTCTCTCTCGACCTCGCCCTGGGAGGCCATGGATTTCCCCGTGGTCGTATCATT
GAACTGTACGGGCCGGAATCGAGTGGTAAAACCACACTCGCTCTGCATGTGATTGCCAACGCCCAGAAAGAGGGCGGCAT
CGCCGCGTTCATCGACGCCGAGCATGCCCTCGATCCCGTCTGGGCGAAAAAACTCGGCGTCAACATCTCCGAGCTGCTGG
TCAGCCAGCCGACTTACGGCGAAGAAGGCCTGCAGATCGCAGAAATGCTGATCAAATCCAACTCGGTCGATGTCATCGTC
GTCGACTCCGTCGCCGCTCTGGTCCCCAAGGCGGAACTGGACGGGGAAATCGGTGATTCCCACGTCGGTCTGCAGGCACG
TATGATGAGCCAGGCCATGCGGAAACTGACTGGTGCCATCTCCAAATCCAAAACCACGGTCATTTTCATTAACCAGATCC
GTGAGAAGATTGGCGTCATGTTCGGCAGCCCCGAAACAACTCCCGGTGGTCGTGCACTGAAATTCTACAGTTCTGTTCGC
GTCGATGTTCGCCGCATCGCAACGCTCAAGGACGGGGACACCGTGACTGGCATTCGCATGAAAGCCAAGATCGTCAAAAA
CAAGATCGCCCCTCCGTTCCGCATTGCAGAATTCGATATGCTCTCCACCGGCGGCATCAATTTCGAACTGGACCTGCTGG
ACCTGGCCGTGGAAAACAAGATCGTCAAAAAGAGTGGCAGCTGGTTCAGTTATGGGGAAACCCGACTGGGACAGGGCCGG
GACCGTTCCAAAACGGTTCTGGAAGAAAACCCGGAGCTCTGTCAGGAAATCAAGCAGAAAGTCCTTGAAGCCCAAGGTCT
GGTTCCTGTTACTGAAGAAGAACCGGAAGCCGTCGAAGCCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (28-287)

3D structure

• AlphaFold DB: A0A517Q2X5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Bacillus subtilis subsp. subtilis str. 168	63.497	90.556	0.575
recA	Lactococcus lactis subsp. cremoris KW2	61.398	91.389	0.561
recA	Streptococcus pneumoniae Rx1	58.651	94.722	0.556
recA	Streptococcus pneumoniae D39	58.651	94.722	0.556
recA	Streptococcus pneumoniae R6	58.651	94.722	0.556
recA	Streptococcus pneumoniae TIGR4	58.651	94.722	0.556
recA	Streptococcus mitis NCTC 12261	59.756	91.111	0.544
recA	Streptococcus mitis SK321	59.756	91.111	0.544
recA	Acinetobacter baylyi ADP1	56.433	95	0.536
recA	Vibrio cholerae O1 biovar El Tor strain E7946	60.127	87.778	0.528
recA	Vibrio cholerae strain A1552	60.127	87.778	0.528
recA	Ralstonia pseudosolanacearum GMI1000	60.127	87.778	0.528
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	57.927	91.111	0.528
recA	Latilactobacillus sakei subsp. sakei 23K	57.057	92.5	0.528
recA	Streptococcus pyogenes NZ131	59.434	88.333	0.525
recA	Acinetobacter baumannii D1279779	56.25	93.333	0.525
recA	Pseudomonas stutzeri DSM 10701	60.191	87.222	0.525
recA	Helicobacter pylori 26695	55.263	95	0.525
recA	Helicobacter pylori strain NCTC11637	54.971	95	0.522
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.567	89.167	0.522
recA	Streptococcus mutans UA159	57.846	90.278	0.522
recA	Neisseria gonorrhoeae MS11	58.413	87.5	0.511
recA	Neisseria gonorrhoeae strain FA1090	58.413	87.5	0.511
recA	Neisseria gonorrhoeae MS11	58.413	87.5	0.511
recA	Glaesserella parasuis strain SC1401	58.599	87.222	0.511
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	57.547	88.333	0.508