Detailed information NTG0344105

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: EPB55_RS06905
• Genome accession: NZ_CP035731
• Coordinates: 1359674..1360723 (-)
• Length: 349 a.a.
• NCBI ID: WP_011079524.1
• Uniprot ID: Q7MHR4
• Organism: Vibrio vulnificus strain 2142-77
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1354674..1365723

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EPB55_RS06885	csrA	1354679..1354870 (-)	192	WP_011079528.1	carbon storage regulator CsrA	-
EPB55_RS06890	-	1354962..1356149 (-)	1188	WP_045618623.1	aspartate kinase	-
EPB55_RS06895	alaS	1356346..1358928 (-)	2583	WP_061058916.1	alanine--tRNA ligase	-
EPB55_RS06900	recX	1359108..1359569 (-)	462	WP_103277992.1	recombination regulator RecX	-
EPB55_RS06905	recA	1359674..1360723 (-)	1050	WP_011079524.1	recombinase RecA	Machinery gene
EPB55_RS06910	pncC	1360857..1361360 (-)	504	WP_039554640.1	nicotinamide-nucleotide amidase	-
EPB55_RS06915	mutS	1361444..1364005 (+)	2562	WP_039554641.1	DNA mismatch repair protein MutS	-
EPB55_RS06920	rpoS	1364081..1365073 (-)	993	WP_011079521.1	RNA polymerase sigma factor RpoS	Regulator

Sequence

Protein

• Length: 349 a.a.
• Molecular weight: 37738.34 Da
• Isoelectric Point: 4.8857

>NTDB_id=344105 EPB55_RS06905 WP_011079524.1 1359674..1360723(-) (recA) [Vibrio vulnificus strain 2142-77]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEIFGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPVYAKKLGVNIDQLLVSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE
TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKCKLIEKSGAWYSYNGDKIGQGKANACKYLKENVDVAKVLDT
KLREMLLSPANINDESAELVEEMPEQEEF

Nucleotide

• Length: 1050 bp

>NTDB_id=344105 EPB55_RS06905 WP_011079524.1 1359674..1360723(-) (recA) [Vibrio vulnificus strain 2142-77]
ATGGACGAGAACAAACAGAAGGCACTGGCCGCCGCACTAGGTCAAATTGAAAAGCAGTTCGGTAAAGGTTCAATCATGCG
CCTAGGTGACAACCGTGCGATGGATGTTGAAACCATCTCGACAGGTTCACTATCTCTGGATATTGCGCTGGGTGCGGGTG
GCTTACCAATGGGCCGTATCGTTGAAATTTTTGGTCCAGAATCTTCAGGTAAAACCACGTTGACCCTTGAGCTGATCGCT
GCGGCTCAACGTGAAGGCAAAACTTGTGCGTTTATCGATGCCGAGCACGCGTTGGATCCTGTGTATGCGAAGAAGCTTGG
CGTTAATATCGACCAGTTGTTGGTATCTCAGCCTGACACCGGTGAACAAGCATTGGAAATCTGTGATGCTCTTGCTCGCT
CAGGTGCGGTTGACGTTATTGTTGTCGACTCTGTTGCAGCATTGACACCAAAGGCAGAAATCGAAGGTGAGATGGGCGAC
TCGCACATGGGTCTTCAAGCTCGTATGCTATCTCAAGCGATGCGTAAGTTAACGGGTAACCTAAAGCAGTCTAACTGTAT
GTGTATCTTCATCAACCAGATCCGTATGAAGATCGGTGTGATGTTTGGTAACCCAGAAACCACAACGGGTGGTAACGCTC
TGAAATTCTACGCTTCTGTTCGTCTTGATATTCGCCGTACTGGTGCGATCAAAGAAGGTGATGAGGTCGTGGGTAACGAA
ACGCGCATCAAAGTGGTGAAGAATAAGATCGCTGCGCCGTTTAAAGAAGCCAATACTCAAATTATGTATGGCCAAGGCTT
TAACCGCGAAGGTGAACTGATTGACCTAGGCGTGAAATGTAAGCTGATTGAAAAATCAGGTGCTTGGTATAGCTATAACG
GCGACAAAATTGGCCAAGGTAAAGCGAACGCTTGTAAATACCTGAAAGAAAACGTAGATGTCGCAAAAGTACTGGATACG
AAATTGCGTGAAATGTTGCTTTCTCCAGCAAACATCAACGATGAATCGGCAGAGTTAGTCGAAGAAATGCCAGAGCAAGA
AGAGTTTTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: Q7MHR4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	96.084	95.129	0.914
recA	Vibrio cholerae O1 biovar El Tor strain E7946	96.084	95.129	0.914
recA	Pseudomonas stutzeri DSM 10701	74.398	95.129	0.708
recA	Glaesserella parasuis strain SC1401	69.492	100	0.705
recA	Acinetobacter baylyi ADP1	70.145	98.854	0.693
recA	Acinetobacter baumannii D1279779	73.171	93.983	0.688
recA	Neisseria gonorrhoeae MS11	65.805	99.713	0.656
recA	Neisseria gonorrhoeae MS11	65.805	99.713	0.656
recA	Neisseria gonorrhoeae strain FA1090	65.805	99.713	0.656
recA	Ralstonia pseudosolanacearum GMI1000	71.061	89.112	0.633
recA	Helicobacter pylori strain NCTC11637	59.884	98.567	0.59
recA	Helicobacter pylori 26695	59.593	98.567	0.587
recA	Streptococcus pneumoniae Rx1	58.571	100	0.587
recA	Streptococcus pneumoniae R6	58.571	100	0.587
recA	Streptococcus pneumoniae D39	58.571	100	0.587
recA	Streptococcus pneumoniae TIGR4	58.571	100	0.587
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.241	90.544	0.582
recA	Bacillus subtilis subsp. subtilis str. 168	63.24	91.977	0.582
recA	Streptococcus mitis SK321	61.92	92.55	0.573
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.423	94.842	0.573
recA	Lactococcus lactis subsp. cremoris KW2	61.61	92.55	0.57
recA	Streptococcus mitis NCTC 12261	61.61	92.55	0.57
recA	Latilactobacillus sakei subsp. sakei 23K	61.682	91.977	0.567
recA	Streptococcus pyogenes NZ131	60.615	93.123	0.564
recA	Streptococcus mutans UA159	60.615	93.123	0.564
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.258	88.825	0.553