Detailed information NTG0343556

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: EWA66_RS06500
• Genome accession: NZ_CP035680
• Coordinates: 1368285..1369331 (+)
• Length: 348 a.a.
• NCBI ID: WP_039439491.1
• Uniprot ID: -
• Organism: Vibrio navarrensis strain 08-2462
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1363285..1374331

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EWA66_RS06485	rpoS	1363878..1364876 (+)	999	WP_039439488.1	RNA polymerase sigma factor RpoS	Regulator
EWA66_RS06490	mutS	1364974..1367535 (-)	2562	WP_039439489.1	DNA mismatch repair protein MutS	-
EWA66_RS06495	pncC	1367617..1368108 (+)	492	WP_039439490.1	nicotinamide-nucleotide amidase	-
EWA66_RS06500	recA	1368285..1369331 (+)	1047	WP_039439491.1	recombinase RecA	Machinery gene
EWA66_RS06505	recX	1369390..1369848 (+)	459	WP_039439492.1	recombination regulator RecX	-
EWA66_RS06510	alaS	1370030..1372612 (+)	2583	WP_039439493.1	alanine--tRNA ligase	-
EWA66_RS06515	-	1372809..1373996 (+)	1188	WP_039439494.1	aspartate kinase	-
EWA66_RS06520	csrA	1374088..1374285 (+)	198	WP_039430468.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 37558.12 Da
• Isoelectric Point: 4.9706

>NTDB_id=343556 EWA66_RS06500 WP_039439491.1 1368285..1369331(+) (recA) [Vibrio navarrensis strain 08-2462]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEIFGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPVYAKKLGVNIDQLLVSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKEGDEVVGNE
TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKCKLIEKSGAWYSYNGDKIGQGKANACKYLKEHVDVAKVLDT
KLREMLLSPTPLEGAELADEAPEQEEEF

Nucleotide

• Length: 1047 bp

>NTDB_id=343556 EWA66_RS06500 WP_039439491.1 1368285..1369331(+) (recA) [Vibrio navarrensis strain 08-2462]
ATGGACGAGAATAAACAAAAAGCGCTCGCCGCTGCGCTAGGTCAGATCGAAAAGCAGTTTGGTAAAGGCTCTATCATGCG
CTTAGGCGACAACCGTGCGATGGATGTCGAAACGATTTCTACGGGCTCTCTTTCTCTGGACATCGCACTAGGCGCTGGCG
GCTTGCCAATGGGGCGTATTGTCGAAATCTTTGGTCCAGAATCATCCGGTAAAACCACATTAACACTTGAGCTGATTGCC
GCTGCGCAACGTGAAGGTAAAACCTGTGCTTTCATCGATGCGGAACACGCGCTCGACCCTGTTTATGCGAAAAAACTGGG
TGTTAACATTGACCAACTGCTGGTCTCTCAGCCTGACACGGGCGAGCAAGCGCTGGAAATCTGTGACGCTTTGGCACGCT
CTGGTGCAGTCGACGTGATTGTTGTTGACTCCGTTGCTGCCTTGACACCAAAAGCCGAGATCGAAGGTGAGATGGGCGAT
TCGCACATGGGGCTACAGGCTCGTATGCTCTCTCAAGCGATGCGTAAACTCACGGGCAACCTTAAGCAATCTAACTGTAT
GTGTATCTTCATCAACCAGATCCGTATGAAGATCGGTGTGATGTTTGGTAACCCAGAGACCACAACGGGTGGTAACGCGC
TGAAATTCTACGCTTCTGTTCGTTTGGATATCCGTCGTACGGGGTCTATCAAAGAAGGCGACGAAGTGGTGGGGAACGAA
ACGCGTATCAAAGTGGTGAAAAACAAGATCGCGGCGCCATTTAAAGAAGCCAATACTCAGATCATGTATGGCCAAGGCTT
TAACCGCGAAGGTGAGCTGATTGATCTCGGCGTAAAATGTAAGCTGATCGAGAAATCAGGCGCTTGGTACAGCTACAACG
GTGATAAGATCGGCCAAGGTAAAGCAAATGCCTGTAAGTATCTGAAAGAACACGTTGATGTGGCGAAAGTATTGGATACC
AAACTGCGTGAAATGCTGCTCTCGCCTACTCCGCTAGAAGGCGCGGAACTGGCTGATGAAGCGCCGGAGCAAGAAGAAGA
GTTTTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	94.895	95.69	0.908
recA	Vibrio cholerae O1 biovar El Tor strain E7946	94.895	95.69	0.908
recA	Pseudomonas stutzeri DSM 10701	74.618	93.966	0.701
recA	Glaesserella parasuis strain SC1401	69.54	100	0.695
recA	Acinetobacter baumannii D1279779	70.882	97.701	0.693
recA	Acinetobacter baylyi ADP1	72.256	94.253	0.681
recA	Ralstonia pseudosolanacearum GMI1000	69.207	94.253	0.652
recA	Neisseria gonorrhoeae MS11	68.712	93.678	0.644
recA	Neisseria gonorrhoeae MS11	68.712	93.678	0.644
recA	Neisseria gonorrhoeae strain FA1090	68.712	93.678	0.644
recA	Helicobacter pylori 26695	59.71	99.138	0.592
recA	Helicobacter pylori strain NCTC11637	59.42	99.138	0.589
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.924	90.805	0.58
recA	Bacillus subtilis subsp. subtilis str. 168	62.928	92.241	0.58
recA	Streptococcus pneumoniae R6	62.229	92.816	0.578
recA	Streptococcus pneumoniae TIGR4	62.229	92.816	0.578
recA	Streptococcus pneumoniae Rx1	62.229	92.816	0.578
recA	Streptococcus pneumoniae D39	62.229	92.816	0.578
recA	Lactococcus lactis subsp. cremoris KW2	61.92	92.816	0.575
recA	Latilactobacillus sakei subsp. sakei 23K	61.994	92.241	0.572
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.121	95.115	0.572
recA	Streptococcus mitis SK321	61.61	92.816	0.572
recA	Streptococcus pyogenes NZ131	60.923	93.391	0.569
recA	Streptococcus mitis NCTC 12261	61.3	92.816	0.569
recA	Streptococcus mutans UA159	60.308	93.391	0.563
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.258	89.08	0.555