Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE0566   Type   Regulator
Locus tag   F1716_RS03135 Genome accession   NZ_CP045048
Coordinates   517163..517813 (-) Length   216 a.a.
NCBI ID   WP_153257479.1    Uniprot ID   -
Organism   Campylobacter jejuni subsp. jejuni strain NADC 20827     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 512163..522813
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F1716_RS03090 (F1716_03115) - 512554..513297 (-) 744 WP_002871209.1 phage regulatory protein/antirepressor Ant -
  F1716_RS03095 (F1716_03120) - 513294..513476 (-) 183 WP_002795990.1 hypothetical protein -
  F1716_RS03100 (F1716_03125) - 513619..513816 (+) 198 WP_002810107.1 hypothetical protein -
  F1716_RS09835 - 513809..513961 (-) 153 WP_002871210.1 hypothetical protein -
  F1716_RS03105 (F1716_03130) - 513958..514212 (-) 255 WP_052798817.1 hypothetical protein -
  F1716_RS03110 (F1716_03135) - 514203..514472 (-) 270 WP_002874357.1 hypothetical protein -
  F1716_RS03115 (F1716_03140) - 515268..515540 (-) 273 WP_070317305.1 hypothetical protein -
  F1716_RS09840 - 515592..515732 (+) 141 WP_002881938.1 hypothetical protein -
  F1716_RS03120 (F1716_03145) - 515722..515913 (-) 192 WP_070275116.1 hypothetical protein -
  F1716_RS03125 (F1716_03150) - 516055..516312 (+) 258 WP_048818571.1 hypothetical protein -
  F1716_RS03130 (F1716_03155) - 516346..517170 (-) 825 WP_002874362.1 hypothetical protein -
  F1716_RS03135 (F1716_03160) CJE0566 517163..517813 (-) 651 WP_153257479.1 DNA/RNA non-specific endonuclease Regulator
  F1716_RS03140 (F1716_03165) - 517829..518332 (-) 504 WP_002865051.1 hypothetical protein -
  F1716_RS03145 (F1716_03170) - 518319..519524 (-) 1206 WP_070317303.1 AAA family ATPase -
  F1716_RS03150 (F1716_03175) - 519627..520361 (-) 735 WP_070317302.1 S24 family peptidase -
  F1716_RS03155 (F1716_03180) - 520474..520692 (+) 219 WP_002826741.1 hypothetical protein -
  F1716_RS09845 (F1716_03185) - 520798..521097 (+) 300 WP_002861657.1 hypothetical protein -
  F1716_RS03165 (F1716_03190) - 521094..522095 (+) 1002 WP_070317301.1 hypothetical protein -
  F1716_RS03170 (F1716_03195) - 522106..522756 (+) 651 WP_002861659.1 hypothetical protein -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 25454.06 Da        Isoelectric Point: 9.9285

>NTDB_id=343554 F1716_RS03135 WP_153257479.1 517163..517813(-) (CJE0566) [Campylobacter jejuni subsp. jejuni strain NADC 20827]
MKKLIILSLLTTLALADYSQYKPSEDFTKHFTKQNCSQVLDKFYYLNCYDYNLKGTKAVAYKLEAENLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDREHTISNASMRKTTQAQRSTFLMSNITPQNPQINQKVWNKIEKRERQVALKLGEIEVL
NLVNYDSNPQRIRNQIAIPSSYIKIIKGNNFKECYKVPNYEVDNLSIKRYKFNCDG

Nucleotide


Download         Length: 651 bp        

>NTDB_id=343554 F1716_RS03135 WP_153257479.1 517163..517813(-) (CJE0566) [Campylobacter jejuni subsp. jejuni strain NADC 20827]
ATGAAAAAACTTATAATCTTATCATTATTGACAACTCTAGCCTTAGCTGATTATAGCCAATACAAACCAAGTGAAGATTT
TACTAAGCATTTTACTAAGCAAAACTGCTCACAAGTTTTGGATAAGTTTTATTATCTAAATTGTTATGATTATAATCTTA
AAGGCACTAAAGCTGTAGCTTATAAACTAGAAGCGGAAAATCTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACCACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGAGCATACTAT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCCCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AAATTAATCAAAAAGTATGGAATAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAGAAATTGAAGTTTTA
AATTTGGTTAATTATGATAGCAACCCTCAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTATATCAAGATTATAAA
AGGTAATAATTTTAAAGAATGCTATAAAGTTCCAAATTATGAAGTCGATAATTTAAGTATAAAAAGATATAAGTTTAATT
GTGATGGATAA

Domains

Predicted by InterProScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(25-209)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE0566 Campylobacter jejuni RM1221

86.047

99.537

0.856
  CJE1441 Campylobacter jejuni RM1221

85.581

99.537

0.852

Multiple sequence alignment