Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | ETT56_RS09230 | Genome accession | NZ_CP035443 |
| Coordinates | 1805250..1806386 (-) | Length | 378 a.a. |
| NCBI ID | WP_023610714.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain emm58 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1796753..1823124 | 1805250..1806386 | within | 0 |
Gene organization within MGE regions
Location: 1796753..1823124
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ETT56_RS09185 (ETT56_09175) | nrdG | 1796753..1797367 (-) | 615 | WP_021775544.1 | anaerobic ribonucleoside-triphosphate reductase activating protein | - |
| ETT56_RS09190 (ETT56_09180) | - | 1797382..1797876 (-) | 495 | WP_014407930.1 | GNAT family N-acetyltransferase | - |
| ETT56_RS09195 (ETT56_09185) | - | 1797885..1798820 (-) | 936 | WP_023610759.1 | Gfo/Idh/MocA family protein | - |
| ETT56_RS09765 | - | 1798849..1798995 (-) | 147 | WP_023610752.1 | hypothetical protein | - |
| ETT56_RS09200 (ETT56_09190) | nrdD | 1799177..1801375 (-) | 2199 | WP_002992831.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| ETT56_RS09205 (ETT56_09195) | - | 1801472..1803031 (-) | 1560 | WP_011055088.1 | membrane protein | - |
| ETT56_RS09210 (ETT56_09200) | - | 1803445..1803750 (-) | 306 | WP_002982199.1 | DUF1292 domain-containing protein | - |
| ETT56_RS09215 (ETT56_09205) | ruvX | 1803762..1804181 (-) | 420 | WP_002982196.1 | Holliday junction resolvase RuvX | - |
| ETT56_RS09220 (ETT56_09210) | - | 1804178..1804447 (-) | 270 | WP_002982194.1 | IreB family regulatory phosphoprotein | - |
| ETT56_RS09225 (ETT56_09215) | spx | 1804561..1804959 (-) | 399 | WP_002982188.1 | transcriptional regulator Spx | - |
| ETT56_RS09230 (ETT56_09220) | recA | 1805250..1806386 (-) | 1137 | WP_023610714.1 | recombinase RecA | Machinery gene |
| ETT56_RS09235 (ETT56_09225) | cinA | 1806475..1807746 (-) | 1272 | WP_023610745.1 | competence/damage-inducible protein A | Machinery gene |
| ETT56_RS09240 (ETT56_09230) | - | 1807815..1808375 (-) | 561 | WP_023610776.1 | DNA-3-methyladenine glycosylase I | - |
| ETT56_RS09245 (ETT56_09235) | ruvA | 1808385..1808981 (-) | 597 | WP_002992186.1 | Holliday junction branch migration protein RuvA | - |
| ETT56_RS09250 (ETT56_09240) | - | 1808983..1810203 (-) | 1221 | WP_002991361.1 | MFS transporter | - |
| ETT56_RS09255 (ETT56_09245) | mutL | 1810214..1812196 (-) | 1983 | WP_023610727.1 | DNA mismatch repair endonuclease MutL | - |
| ETT56_RS09260 (ETT56_09250) | - | 1812291..1813436 (-) | 1146 | WP_063632873.1 | site-specific integrase | - |
| ETT56_RS09920 | - | 1813518..1814186 (-) | 669 | WP_012560499.1 | helix-turn-helix domain-containing protein | - |
| ETT56_RS09270 (ETT56_09260) | - | 1814353..1814538 (+) | 186 | WP_012560498.1 | DNA-binding transcriptional regulator | - |
| ETT56_RS09275 (ETT56_09265) | - | 1814554..1814802 (+) | 249 | WP_063632871.1 | hypothetical protein | - |
| ETT56_RS09280 (ETT56_09270) | - | 1815330..1815539 (+) | 210 | WP_009880499.1 | hypothetical protein | - |
| ETT56_RS09925 (ETT56_09275) | - | 1815536..1815727 (+) | 192 | WP_063632869.1 | hypothetical protein | - |
| ETT56_RS09930 (ETT56_09280) | - | 1815749..1815943 (+) | 195 | WP_063632867.1 | hypothetical protein | - |
| ETT56_RS09295 (ETT56_09285) | - | 1815955..1816284 (+) | 330 | WP_000174498.1 | hypothetical protein | - |
| ETT56_RS09300 (ETT56_09290) | - | 1816287..1816559 (+) | 273 | WP_063631415.1 | hypothetical protein | - |
| ETT56_RS09305 (ETT56_09295) | - | 1816560..1817417 (+) | 858 | WP_063632865.1 | primase alpha helix C-terminal domain-containing protein | - |
| ETT56_RS09310 (ETT56_09300) | - | 1817386..1819074 (+) | 1689 | WP_063632863.1 | phage/plasmid primase, P4 family | - |
| ETT56_RS09315 (ETT56_09305) | - | 1819362..1819535 (+) | 174 | WP_080465172.1 | DUF2758 domain-containing protein | - |
| ETT56_RS09320 (ETT56_09310) | - | 1819716..1819982 (+) | 267 | WP_063632861.1 | hypothetical protein | - |
| ETT56_RS09325 (ETT56_09315) | - | 1819989..1820147 (+) | 159 | WP_011529115.1 | DUF2292 domain-containing protein | - |
| ETT56_RS09330 (ETT56_09320) | - | 1820248..1820850 (+) | 603 | WP_063632859.1 | hypothetical protein | - |
| ETT56_RS09335 (ETT56_09325) | - | 1820840..1821169 (+) | 330 | WP_227876756.1 | hydrolase | - |
| ETT56_RS09340 (ETT56_09330) | - | 1821445..1821711 (+) | 267 | WP_223824853.1 | hypothetical protein | - |
| ETT56_RS09345 (ETT56_09335) | - | 1821817..1822230 (+) | 414 | WP_012560493.1 | DUF1492 domain-containing protein | - |
| ETT56_RS09350 (ETT56_09340) | - | 1822305..1822505 (+) | 201 | WP_011529120.1 | hypothetical protein | - |
| ETT56_RS09355 (ETT56_09345) | - | 1822557..1822766 (+) | 210 | Protein_1755 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| ETT56_RS09360 (ETT56_09350) | - | 1822741..1823124 (+) | 384 | WP_063632854.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
Sequence
Protein
Download Length: 378 a.a. Molecular weight: 40573.19 Da Isoelectric Point: 4.9639
>NTDB_id=341882 ETT56_RS09230 WP_023610714.1 1805250..1806386(-) (recA) [Streptococcus pyogenes strain emm58]
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKRYLADHPQLFDEIDRKVRVKFGLLEESEAESAMAVASEETDDLALDLDNGIEIED
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKRYLADHPQLFDEIDRKVRVKFGLLEESEAESAMAVASEETDDLALDLDNGIEIED
Nucleotide
Download Length: 1137 bp
>NTDB_id=341882 ETT56_RS09230 WP_023610714.1 1805250..1806386(-) (recA) [Streptococcus pyogenes strain emm58]
TTGGCAAAAAAATTAAAAAAGAATGAAGAAATCACTAAGAAGTTTGGTGACGAACGTCGCAAAGCTCTTGATGATGCTTT
GAAAAATATTGAAAAAGATTTCGGTAAGGGCGCAGTGATGCGATTAGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA
GTTCAGGAAGTCTAGCTCTTGATATTGCGCTTGGAGCTGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGTCCA
GAGTCTTCCGGTAAAACGACTGTGGCTTTACATGCTGTAGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA
TGCCGAGCATGCGCTTGATCCAGCTTATGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTCTTGTCTCAACCAGATT
CTGGAGAACAAGGACTTGAAATTGCAGGTAAATTGATTGATTCTGGTGCGGTTGACCTGGTTGTTGTCGATTCAGTAGCA
GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC
CATGCGTAAATTATCAGCTTCTATTAATAAAACAAAAACTATCGCTATCTTTATTAACCAATTGCGTGAAAAAGTTGGTG
TGATGTTTGGAAATCCTGAAACAACACCAGGTGGTCGAGCTTTGAAATTCTATGCTTCTGTTCGGTTGGATGTGCGTGGA
ACAACTCAAATTAAAGGAACTGGTGACCAAAAAGATAGCAGTATTGGTAAGGAGACCAAAATAAAGGTTGTTAAAAACAA
GGTCGCTCCGCCATTTAAGGTAGCAGAAGTTGAAATCATGTATGGGGAAGGTATTTCTCGTACAGGGGAGCTTGTGAAAA
TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATGGTGAGAAGATTGGCCAAGGTTCTGAA
AATGCTAAGCGTTATTTGGCCGATCATCCACAATTGTTTGATGAAATCGACCGTAAAGTACGTGTTAAATTTGGTTTGCT
TGAAGAAAGCGAAGCAGAATCTGCTATGGCAGTAGCATCAGAAGAAACCGATGATCTTGCTTTAGATTTAGATAATGGTA
TTGAAATTGAAGATTAA
TTGGCAAAAAAATTAAAAAAGAATGAAGAAATCACTAAGAAGTTTGGTGACGAACGTCGCAAAGCTCTTGATGATGCTTT
GAAAAATATTGAAAAAGATTTCGGTAAGGGCGCAGTGATGCGATTAGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA
GTTCAGGAAGTCTAGCTCTTGATATTGCGCTTGGAGCTGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGTCCA
GAGTCTTCCGGTAAAACGACTGTGGCTTTACATGCTGTAGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA
TGCCGAGCATGCGCTTGATCCAGCTTATGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTCTTGTCTCAACCAGATT
CTGGAGAACAAGGACTTGAAATTGCAGGTAAATTGATTGATTCTGGTGCGGTTGACCTGGTTGTTGTCGATTCAGTAGCA
GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC
CATGCGTAAATTATCAGCTTCTATTAATAAAACAAAAACTATCGCTATCTTTATTAACCAATTGCGTGAAAAAGTTGGTG
TGATGTTTGGAAATCCTGAAACAACACCAGGTGGTCGAGCTTTGAAATTCTATGCTTCTGTTCGGTTGGATGTGCGTGGA
ACAACTCAAATTAAAGGAACTGGTGACCAAAAAGATAGCAGTATTGGTAAGGAGACCAAAATAAAGGTTGTTAAAAACAA
GGTCGCTCCGCCATTTAAGGTAGCAGAAGTTGAAATCATGTATGGGGAAGGTATTTCTCGTACAGGGGAGCTTGTGAAAA
TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATGGTGAGAAGATTGGCCAAGGTTCTGAA
AATGCTAAGCGTTATTTGGCCGATCATCCACAATTGTTTGATGAAATCGACCGTAAAGTACGTGTTAAATTTGGTTTGCT
TGAAGAAAGCGAAGCAGAATCTGCTATGGCAGTAGCATCAGAAGAAACCGATGATCTTGCTTTAGATTTAGATAATGGTA
TTGAAATTGAAGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.