Detailed information NTG0341506

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: F6X00_RS05720
• Genome accession: NZ_CP044206
• Coordinates: 1220318..1223140 (-)
• Length: 940 a.a.
• NCBI ID: WP_011079386.1
• Uniprot ID: Q8DCJ3
• Organism: Vibrio vulnificus strain Vv180806
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1215318..1228140

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F6X00_RS05705 (F6X00_05815)	lysC	1215438..1216787 (-)	1350	WP_130349842.1	lysine-sensitive aspartokinase 3	-
F6X00_RS05710 (F6X00_05825)	-	1217302..1218423 (+)	1122	WP_045614558.1	alanine--glyoxylate aminotransferase family protein	-
F6X00_RS05715 (F6X00_05830)	-	1218488..1220251 (-)	1764	WP_182290601.1	PglL family O-oligosaccharyltransferase	-
F6X00_RS05720 (F6X00_05835)	uvrA	1220318..1223140 (-)	2823	WP_011079386.1	excinuclease ABC subunit UvrA	Machinery gene
F6X00_RS05725 (F6X00_05840)	galU	1223283..1224155 (-)	873	WP_011079387.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
F6X00_RS05730 (F6X00_05845)	qstR	1224341..1224988 (-)	648	WP_011079388.1	response regulator transcription factor	Regulator
F6X00_RS05735 (F6X00_05850)	ssb	1225288..1225827 (+)	540	WP_011079389.1	single-stranded DNA-binding protein	Machinery gene
F6X00_RS05740 (F6X00_05855)	csrD	1225980..1227977 (+)	1998	WP_043877331.1	RNase E specificity factor CsrD	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 103960.42 Da
• Isoelectric Point: 6.4803

>NTDB_id=341506 F6X00_RS05720 WP_011079386.1 1220318..1223140(-) (uvrA) [Vibrio vulnificus strain Vv180806]
MDKIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPEHQVPLAAQTISQMVDKVLELPEGAKMMLLAPIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLTDPPTLELHKKHTIEVVVDRVKVRGDLQQRLAESFETALELSGGIAVIAPMEGD
GEEIVFSANFACPHCGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPERVIQDANLSLAQGAIRGWDQKNYYYFQML
TSLAEHYDFDLHAPFNSLSKRIQEVILKGSGRTEIEFKYINDRGDIRLKRHPFEGILNTLERRYRDTESNSVREELVKYI
STKPCTSCGGTRLRLEARNVFINDTTLPQIVELSIADALTFFATLKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVLVVEHDEDAIRCADHVIDIG
PGAGVHGGQVVAEGTMAEILANPDSLTGQYLSGAKQIIVPTQRTPRDKNKTVELIGASGNNLKEVNLSVPVGLFSCITGV
SGSGKSTLINDTFFKIAHTQLNGATTAQPAPYKSIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFSGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVHYKGKSIDEVLEMTVEDAHEFFA
PVPVIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDH
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGEIIAQGTPEDVAQIEGSHTARFLKPMLK

Nucleotide

• Length: 2823 bp

>NTDB_id=341506 F6X00_RS05720 WP_011079386.1 1220318..1223140(-) (uvrA) [Vibrio vulnificus strain Vv180806]
ATGGACAAGATAGAAGTTCGCGGAGCACGTACCCATAATCTCAAAAACATAAATCTCACCATTCCCCGAGATAAACTGAT
CGTTATTACGGGCTTATCCGGCTCAGGTAAGTCTTCTTTGGCATTTGACACTTTGTACGCAGAGGGTCAGCGACGTTATG
TTGAATCCCTCTCTGCTTATGCTCGTCAATTTCTTTCATTGATGGAAAAGCCCGATGTTGACCACATTGAAGGCCTCTCG
CCAGCCATTTCTATCGAGCAAAAATCCACCTCACACAACCCGCGTTCAACCGTAGGAACCATCACAGAAGTGTATGACTA
CCTTCGCCTACTGTATGCCCGCGTTGGTGAGCCTCGCTGTCCTGAACATCAAGTCCCTTTAGCCGCTCAAACCATTAGCC
AAATGGTCGACAAAGTGCTGGAGCTGCCTGAAGGTGCCAAAATGATGTTGCTCGCCCCCATCGTGAAAGAGCGCAAAGGC
GAGCACGTTAAAACATTAGAGAATCTTGCTGCTCAAGGTTTTATCCGTGCGCGTATTGACGGAGAGACCTGTGACCTCAC
CGATCCACCAACGCTAGAGTTACACAAAAAGCACACCATTGAAGTGGTGGTTGACCGCGTTAAAGTGCGTGGCGATTTAC
AACAAAGGCTCGCAGAATCCTTTGAAACGGCACTGGAACTCTCAGGTGGCATCGCTGTGATTGCCCCTATGGAGGGTGAC
GGTGAAGAGATCGTTTTTTCCGCCAATTTTGCGTGTCCCCACTGTGGTTATAGTATGCAAGAGCTTGAGCCACGTTTGTT
CTCGTTCAATAACCCAGCAGGGGCTTGTGGCACCTGTGATGGCCTCGGGGTACAGCAATATTTTGACCCAGAACGTGTGA
TTCAAGATGCCAATTTAAGTCTTGCACAAGGGGCGATTCGTGGTTGGGATCAGAAGAACTATTACTATTTCCAAATGCTC
ACCTCGCTGGCTGAGCATTACGATTTCGATTTACATGCCCCTTTTAATTCGCTTTCAAAACGCATCCAAGAGGTCATCTT
AAAAGGCTCAGGGCGCACTGAAATCGAATTTAAGTACATCAACGATCGAGGCGACATTCGTCTTAAACGCCATCCATTTG
AAGGTATTCTCAATACACTCGAGCGCCGTTATCGCGACACCGAATCTAACTCGGTACGAGAGGAGTTGGTAAAATATATC
TCCACCAAACCTTGCACCAGTTGTGGTGGAACTCGTCTGCGCCTAGAAGCACGCAACGTGTTTATTAATGACACGACATT
GCCACAAATCGTCGAGTTGAGTATCGCGGATGCATTGACCTTTTTCGCCACCTTAAAACTCGAAGGGCAGCGAGCTCAAA
TTGCGGAGAAGGTCATGAAAGAGATCAACGATCGACTGCAGTTTTTAGTCAACGTTGGCCTCAATTATTTGAACCTGTCT
CGCAGCGCTGAAACCTTGTCTGGTGGCGAAGCACAGCGTATTCGTCTAGCTAGCCAGATCGGTGCCGGTTTGGTTGGCGT
GATGTACGTGCTCGATGAACCGTCAATCGGCCTTCACCAGCGTGACAACGAGCGCTTACTCAAAACACTCACGCACTTAC
GCGATCTCGGCAATACCGTATTAGTCGTAGAGCATGATGAAGATGCGATTCGTTGTGCCGACCATGTGATTGACATTGGC
CCTGGTGCAGGCGTACATGGTGGCCAAGTGGTTGCCGAAGGAACAATGGCCGAGATTCTCGCCAATCCAGATTCCTTGAC
CGGACAATACTTGAGCGGTGCCAAGCAGATTATTGTGCCGACTCAACGCACACCAAGAGATAAGAACAAAACCGTTGAGC
TCATTGGAGCCAGTGGCAACAACCTTAAAGAGGTCAATCTTTCGGTGCCTGTCGGGCTATTCAGTTGTATCACTGGGGTT
TCTGGTTCAGGTAAATCAACACTGATTAACGACACCTTCTTCAAAATTGCGCATACCCAACTCAATGGAGCGACCACAGC
TCAACCAGCGCCTTATAAGTCTATTAAAGGCTTAGAGCATTTTGATAAGGTCATCGATATCGACCAGAGCCCCATCGGTC
GCACACCGCGTTCGAATCCAGCAACCTATACGGGGATTTTCACTCCGATTCGAGAGCTGTTCTCCGGCACCCAAGAGTCT
CGTTCACGTGGCTATAAGCCAGGGCGTTTCAGCTTTAACGTTCGTGGTGGCCGCTGTGAAGCTTGCCAAGGTGATGGTGT
TATCAAGGTTGAAATGCACTTTTTACCTGATGTTTACGTCCCTTGTGATGTGTGTAAAGGCAAGCGCTACAACCGTGAAA
CGTTAGAAGTACACTACAAAGGGAAGAGCATCGATGAAGTGCTGGAAATGACGGTTGAAGACGCTCATGAGTTTTTCGCT
CCTGTCCCTGTCATCGCGCGTAAACTGCAAACCTTAATGGATGTGGGTCTTTCTTATATCCGCTTAGGTCAAGCGGCCAC
CACCCTCTCTGGCGGTGAAGCACAACGTGTGAAACTGGCCCGTGAGTTGTCCAAACGCGATACGGGCAAAACCCTTTATA
TTTTGGATGAACCAACAACGGGCCTACACTTCCACGATATCCAGCAACTTTTGACCGTATTGCATCGCTTACGTGATCAT
GGCAACACCGTTGTCGTGATTGAGCATAATTTAGATGTGATCAAAACGGCCGATTGGATCATCGACTTAGGTCCAGAAGG
CGGCCAAGGTGGAGGGGAAATCATTGCCCAAGGAACACCTGAAGATGTGGCGCAGATCGAAGGTTCGCATACCGCACGCT
TCCTTAAGCCTATGTTGAAATAG

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (622-859)

• UvrA interaction domain (UvrA_inter) (130-236)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-396)

3D structure

• AlphaFold DB: Q8DCJ3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	58.068	100	0.582
uvrA	Streptococcus pneumoniae TIGR4	58.068	100	0.582
uvrA	Streptococcus pneumoniae D39	58.068	100	0.582