Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | SEZ_RS09105 | Genome accession | NC_011134 |
| Coordinates | 1932481..1933617 (-) | Length | 378 a.a. |
| NCBI ID | WP_012516441.1 | Uniprot ID | - |
| Organism | Streptococcus equi subsp. zooepidemicus MGCS10565 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1903129..1937763 | 1932481..1933617 | within | 0 |
| IScluster/Tn | 1929355..1937763 | 1932481..1933617 | within | 0 |
Gene organization within MGE regions
Location: 1903129..1937763
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SEZ_RS08940 (Sez_1834) | - | 1903129..1903770 (+) | 642 | WP_012516411.1 | deoxynucleoside kinase | - |
| SEZ_RS08945 (Sez_1835) | - | 1904052..1905056 (+) | 1005 | WP_012516412.1 | hypothetical protein | - |
| SEZ_RS08950 (Sez_1836) | - | 1905107..1905910 (-) | 804 | WP_012516413.1 | ATP-binding cassette domain-containing protein | - |
| SEZ_RS08955 (Sez_1837) | - | 1905919..1906803 (-) | 885 | WP_012516414.1 | ABC transporter permease | - |
| SEZ_RS08960 (Sez_1838) | - | 1906913..1907875 (-) | 963 | WP_012516415.1 | ABC transporter substrate-binding protein | - |
| SEZ_RS08965 (Sez_1839) | - | 1907902..1908867 (-) | 966 | WP_041785774.1 | ABC transporter substrate-binding protein | - |
| SEZ_RS08970 (Sez_1840) | - | 1909273..1910226 (-) | 954 | WP_012514856.1 | IS30 family transposase | - |
| SEZ_RS08975 (Sez_1841) | - | 1910412..1911810 (+) | 1399 | Protein_1724 | ISNCY family transposase | - |
| SEZ_RS08980 (Sez_1844) | ssbA | 1911977..1912372 (-) | 396 | WP_012516417.1 | single-stranded DNA-binding protein | Machinery gene |
| SEZ_RS08985 (Sez_1845) | - | 1912483..1913196 (+) | 714 | WP_041785777.1 | class I SAM-dependent methyltransferase | - |
| SEZ_RS08990 (Sez_1846) | ytpR | 1913498..1914124 (-) | 627 | WP_012516419.1 | YtpR family tRNA-binding protein | - |
| SEZ_RS08995 (Sez_1847) | - | 1914139..1914456 (-) | 318 | WP_012516420.1 | thioredoxin family protein | - |
| SEZ_RS09000 (Sez_1848) | - | 1914453..1914737 (-) | 285 | WP_021321209.1 | DUF4651 domain-containing protein | - |
| SEZ_RS09005 (Sez_1849) | pepA | 1915141..1916208 (+) | 1068 | WP_012516422.1 | glutamyl aminopeptidase | - |
| SEZ_RS09010 (Sez_1850) | proC | 1916292..1917065 (+) | 774 | WP_012516423.1 | pyrroline-5-carboxylate reductase | - |
| SEZ_RS09015 (Sez_1851) | - | 1917300..1917737 (-) | 438 | WP_012516424.1 | hypothetical protein | - |
| SEZ_RS09020 (Sez_1852) | - | 1917767..1918441 (-) | 675 | WP_012516425.1 | CPBP family intramembrane glutamic endopeptidase | - |
| SEZ_RS09025 (Sez_1853) | - | 1918451..1918903 (-) | 453 | WP_012516426.1 | hypothetical protein | - |
| SEZ_RS09030 (Sez_1854) | - | 1918905..1919108 (-) | 204 | WP_012516427.1 | helix-turn-helix transcriptional regulator | - |
| SEZ_RS09035 (Sez_1855) | yaaA | 1919539..1920270 (+) | 732 | WP_012516428.1 | peroxide stress protein YaaA | - |
| SEZ_RS09040 (Sez_1857) | nrdG | 1920731..1921345 (-) | 615 | WP_012516430.1 | anaerobic ribonucleoside-triphosphate reductase activating protein | - |
| SEZ_RS09045 (Sez_1858) | - | 1921355..1921849 (-) | 495 | WP_012516431.1 | GNAT family N-acetyltransferase | - |
| SEZ_RS09050 (Sez_1859) | - | 1921862..1922797 (-) | 936 | WP_012516432.1 | Gfo/Idh/MocA family oxidoreductase | - |
| SEZ_RS09900 (Sez_1860) | - | 1922825..1922971 (-) | 147 | WP_012516433.1 | hypothetical protein | - |
| SEZ_RS09055 (Sez_1861) | nrdD | 1923077..1925275 (-) | 2199 | WP_012516434.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| SEZ_RS09060 (Sez_1862) | - | 1925371..1926906 (-) | 1536 | WP_012516435.1 | membrane protein | - |
| SEZ_RS09065 (Sez_1864) | - | 1927482..1927781 (-) | 300 | WP_012516437.1 | DUF1292 domain-containing protein | - |
| SEZ_RS09070 (Sez_1865) | ruvX | 1927791..1928210 (-) | 420 | WP_012678687.1 | Holliday junction resolvase RuvX | - |
| SEZ_RS09075 (Sez_1866) | - | 1928207..1928476 (-) | 270 | WP_012516439.1 | IreB family regulatory phosphoprotein | - |
| SEZ_RS09080 (Sez_1867) | spx | 1928589..1928987 (-) | 399 | WP_012516440.1 | transcriptional regulator Spx | - |
| SEZ_RS09760 | - | 1929355..1930926 (-) | 1572 | Protein_1747 | IS3 family transposase | - |
| SEZ_RS09100 (Sez_1872) | - | 1931001..1932343 (+) | 1343 | WP_165626751.1 | IS3 family transposase | - |
| SEZ_RS09105 (Sez_1873) | recA | 1932481..1933617 (-) | 1137 | WP_012516441.1 | recombinase RecA | Machinery gene |
| SEZ_RS09110 (Sez_1874) | cinA | 1933711..1934982 (-) | 1272 | WP_012516442.1 | competence/damage-inducible protein A | Machinery gene |
| SEZ_RS09115 (Sez_1875) | - | 1935668..1935958 (-) | 291 | WP_012516443.1 | hypothetical protein | - |
| SEZ_RS09120 (Sez_1876) | - | 1935952..1936524 (-) | 573 | WP_012516444.1 | phosphlipase A2 SlaA | - |
| SEZ_RS09125 (Sez_1877) | - | 1936810..1937763 (+) | 954 | WP_012516445.1 | IS30 family transposase | - |
Sequence
Protein
Download Length: 378 a.a. Molecular weight: 40558.21 Da Isoelectric Point: 4.9679
>NTDB_id=31402 SEZ_RS09105 WP_012516441.1 1932481..1933617(-) (recA) [Streptococcus equi subsp. zooepidemicus MGCS10565]
MAKKVKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDNHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELIKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKRYLADHPELFDEIDHKVRVKFGLLEDTEESAAVDPAAAKADELVLELDDAIEIED
MAKKVKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDNHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELIKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKRYLADHPELFDEIDHKVRVKFGLLEDTEESAAVDPAAAKADELVLELDDAIEIED
Nucleotide
Download Length: 1137 bp
>NTDB_id=31402 SEZ_RS09105 WP_012516441.1 1932481..1933617(-) (recA) [Streptococcus equi subsp. zooepidemicus MGCS10565]
TTGGCAAAAAAAGTTAAAAAAAATGAAGAAATCACCAAAAAATTTGGTGATGAACGTCGTAAAGCACTTGATGATGCGTT
AAAGAACATCGAAAAAGATTTTGGTAAGGGTGCGGTTATGCGCCTTGGTGAGCGTGCAGAGCAAAAGGTTCAGGTGATGA
GTTCGGGCAGTCTTGCTTTAGACATTGCGCTTGGAGCAGGTGGCTATCCTAAAGGGCGTATTATTGAAATCTATGGACCA
GAGTCTTCTGGTAAAACAACAGTTGCCCTGCATGCAGTAGCGCAGGCTCAAAAAGAAGGTGGTATTGCAGCCTTCATTGA
TGCGGAGCATGCCTTGGATCCTGCCTATGCTGCGGCGCTAGGTGTTAATATTGATGAGCTGCTTTTGTCACAGCCGGATT
CTGGTGAGCAAGGACTTGAGATAGCAGGTAAATTGATTGATTCTGGTGCTGTTGATTTGGTTGTCGTTGACTCTGTTGCA
GCTTTAGTGCCTCGTGCTGAGATTGATGGTGATATTGGTGATAACCACGTTGGTCTGCAGGCTCGTATGATGAGTCAGGC
AATGCGTAAGCTTTCAGCCTCAATCAATAAAACCAAGACAATTGCGATCTTTATTAACCAGCTGCGTGAAAAGGTAGGGG
TTATGTTTGGTAATCCAGAGACGACACCAGGTGGTCGTGCTTTGAAATTCTATGCTTCTGTCCGTCTAGATGTTCGTGGA
ACAACACAAATAAAAGGAACTGGAGATCAAAAAGACAGTAGTATCGGTAAGGAAACCAAGATTAAGGTTGTTAAGAATAA
GGTTGCTCCGCCATTTAAGGTGGCTGAGGTTGAAATCATGTATGGAGAAGGCATCTCACGTACAGGTGAGCTGATTAAAA
TTGCTTCAGATTTAGACATTATTCAAAAAGCTGGTGCTTGGTTCTCTTATAACGGTGAAAAAATTGGTCAGGGCTCTGAA
AATGCCAAGAGATATTTGGCTGATCACCCAGAGCTGTTTGATGAGATTGACCATAAGGTGCGTGTTAAATTTGGCTTGCT
TGAAGATACCGAGGAAAGTGCAGCTGTAGATCCAGCTGCAGCCAAAGCAGATGAGCTGGTTTTAGAGCTAGACGATGCCA
TTGAAATTGAGGATTAG
TTGGCAAAAAAAGTTAAAAAAAATGAAGAAATCACCAAAAAATTTGGTGATGAACGTCGTAAAGCACTTGATGATGCGTT
AAAGAACATCGAAAAAGATTTTGGTAAGGGTGCGGTTATGCGCCTTGGTGAGCGTGCAGAGCAAAAGGTTCAGGTGATGA
GTTCGGGCAGTCTTGCTTTAGACATTGCGCTTGGAGCAGGTGGCTATCCTAAAGGGCGTATTATTGAAATCTATGGACCA
GAGTCTTCTGGTAAAACAACAGTTGCCCTGCATGCAGTAGCGCAGGCTCAAAAAGAAGGTGGTATTGCAGCCTTCATTGA
TGCGGAGCATGCCTTGGATCCTGCCTATGCTGCGGCGCTAGGTGTTAATATTGATGAGCTGCTTTTGTCACAGCCGGATT
CTGGTGAGCAAGGACTTGAGATAGCAGGTAAATTGATTGATTCTGGTGCTGTTGATTTGGTTGTCGTTGACTCTGTTGCA
GCTTTAGTGCCTCGTGCTGAGATTGATGGTGATATTGGTGATAACCACGTTGGTCTGCAGGCTCGTATGATGAGTCAGGC
AATGCGTAAGCTTTCAGCCTCAATCAATAAAACCAAGACAATTGCGATCTTTATTAACCAGCTGCGTGAAAAGGTAGGGG
TTATGTTTGGTAATCCAGAGACGACACCAGGTGGTCGTGCTTTGAAATTCTATGCTTCTGTCCGTCTAGATGTTCGTGGA
ACAACACAAATAAAAGGAACTGGAGATCAAAAAGACAGTAGTATCGGTAAGGAAACCAAGATTAAGGTTGTTAAGAATAA
GGTTGCTCCGCCATTTAAGGTGGCTGAGGTTGAAATCATGTATGGAGAAGGCATCTCACGTACAGGTGAGCTGATTAAAA
TTGCTTCAGATTTAGACATTATTCAAAAAGCTGGTGCTTGGTTCTCTTATAACGGTGAAAAAATTGGTCAGGGCTCTGAA
AATGCCAAGAGATATTTGGCTGATCACCCAGAGCTGTTTGATGAGATTGACCATAAGGTGCGTGTTAAATTTGGCTTGCT
TGAAGATACCGAGGAAAGTGCAGCTGTAGATCCAGCTGCAGCCAAAGCAGATGAGCTGGTTTTAGAGCTAGACGATGCCA
TTGAAATTGAGGATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.