Detailed information NTG0313690

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: D1115_RS02810
• Genome accession: NZ_CP032093
• Coordinates: 548709..549752 (+)
• Length: 347 a.a.
• NCBI ID: WP_128810191.1
• Uniprot ID: -
• Organism: Vibrio alfacsensis strain CAIM 1831
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 543709..554752

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D1115_RS02795 (D1115_02800)	rpoS	544283..545269 (+)	987	WP_128810188.1	RNA polymerase sigma factor RpoS	Regulator
D1115_RS02800 (D1115_02805)	mutS	545380..547941 (-)	2562	WP_128810189.1	DNA mismatch repair protein MutS	-
D1115_RS02805 (D1115_02810)	pncC	548026..548508 (+)	483	WP_128810190.1	nicotinamide-nucleotide amidase	-
D1115_RS02810 (D1115_02815)	recA	548709..549752 (+)	1044	WP_128810191.1	recombinase RecA	Machinery gene
D1115_RS02815 (D1115_02820)	recX	549973..550440 (+)	468	WP_128810192.1	recombination regulator RecX	-
D1115_RS02820 (D1115_02825)	alaS	550583..553180 (+)	2598	WP_128810193.1	alanine--tRNA ligase	-
D1115_RS02825 (D1115_02830)	-	553380..554558 (+)	1179	Protein_466	aspartate kinase	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37488.93 Da
• Isoelectric Point: 4.9743

>NTDB_id=313690 D1115_RS02810 WP_128810191.1 548709..549752(+) (recA) [Vibrio alfacsensis strain CAIM 1831]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPVYAKKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVMVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE
TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKLVEKAGAWYSYNGDKIGQGKANSCNFLRENPEIAKTIDT
KLREMLLSPALPEAPESGEKSEQEEEF

Nucleotide

• Length: 1044 bp

>NTDB_id=313690 D1115_RS02810 WP_128810191.1 548709..549752(+) (recA) [Vibrio alfacsensis strain CAIM 1831]
ATGGACGAGAACAAACAGAAAGCGCTCGCCGCTGCGCTAGGTCAAATTGAAAAGCAATTCGGTAAAGGCTCTATCATGCG
TCTTGGCGACAACCGCACAATGGACGTAGAAACCATTTCAACGGGTTCTCTTTCTCTTGATATCGCTTTGGGTGCTGGTG
GCCTGCCAATGGGTCGTATCGTAGAAATCTACGGTCCAGAGTCTTCAGGCAAAACAACGCTAACACTAGAGCTTATCGCT
GCTGCACAACGTGAGGGTAAAACTTGTGCGTTTATCGATGCAGAGCACGCGCTAGACCCTGTATACGCGAAGAAGCTTGG
TGTTGATATCGACGCACTGTTAGTTTCTCAGCCAGATACGGGTGAGCAAGCTCTAGAGATCTGTGACGCACTGGCACGTT
CTGGTGCTATCGACGTTATGGTTGTCGATTCAGTAGCTGCACTTACACCAAAAGCAGAAATTGAAGGTGAAATGGGCGAC
AGCCACATGGGCCTTCAAGCTCGTATGCTTTCTCAAGCAATGCGTAAGCTTACAGGTAACCTAAAACAGTCTAACTGTAT
GTGTATCTTCATCAACCAAATTCGTATGAAGATTGGTGTGATGTTTGGTAACCCAGAGACGACTACGGGTGGTAACGCAC
TTAAGTTCTACGCTTCTGTTCGTCTAGATATTCGCCGTACTGGTGCAATCAAAGAGGGTGATGAGGTTGTTGGTAACGAA
ACTCGCATCAAAGTCGTTAAGAACAAGATTGCAGCACCGTTCAAAGAAGCAAACACGCAAATCATGTACGGTCAAGGTTT
CAACCGTGAAGGTGAATTGATCGACCTAGGCGTTAAGCACAAGCTAGTAGAGAAAGCAGGTGCTTGGTACAGCTATAACG
GTGATAAGATTGGTCAAGGTAAAGCGAACTCTTGTAACTTCCTACGTGAAAACCCAGAGATTGCTAAGACTATCGATACA
AAACTTCGTGAAATGCTGCTTTCTCCAGCACTACCTGAAGCGCCAGAGTCAGGTGAAAAATCAGAGCAAGAAGAAGAGTT
TTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	95.137	94.813	0.902
recA	Vibrio cholerae O1 biovar El Tor strain E7946	95.137	94.813	0.902
recA	Acinetobacter baylyi ADP1	71.965	99.712	0.718
recA	Pseudomonas stutzeri DSM 10701	74.924	94.236	0.706
recA	Acinetobacter baumannii D1279779	74.695	94.524	0.706
recA	Glaesserella parasuis strain SC1401	70.859	93.948	0.666
recA	Neisseria gonorrhoeae MS11	69.018	93.948	0.648
recA	Neisseria gonorrhoeae MS11	69.018	93.948	0.648
recA	Neisseria gonorrhoeae strain FA1090	69.018	93.948	0.648
recA	Ralstonia pseudosolanacearum GMI1000	72.026	89.625	0.646
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.577	91.931	0.594
recA	Helicobacter pylori strain NCTC11637	60.588	97.983	0.594
recA	Helicobacter pylori 26695	60.294	97.983	0.591
recA	Bacillus subtilis subsp. subtilis str. 168	62.928	92.507	0.582
recA	Streptococcus pneumoniae D39	61.92	93.084	0.576
recA	Streptococcus pneumoniae TIGR4	61.92	93.084	0.576
recA	Streptococcus pneumoniae R6	61.92	93.084	0.576
recA	Streptococcus pneumoniae Rx1	61.92	93.084	0.576
recA	Streptococcus mutans UA159	61.231	93.66	0.573
recA	Streptococcus mitis NCTC 12261	61.61	93.084	0.573
recA	Streptococcus mitis SK321	61.3	93.084	0.571
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.517	95.389	0.568
recA	Streptococcus pyogenes NZ131	60.308	93.66	0.565
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.059	92.507	0.565
recA	Latilactobacillus sakei subsp. sakei 23K	58.61	95.389	0.559
recA	Lactococcus lactis subsp. cremoris KW2	59.752	93.084	0.556