Detailed information NTG0030349

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: XFASM12_RS00480
• Genome accession: NC_010513
• Coordinates: 117216..118259 (+)
• Length: 347 a.a.
• NCBI ID: WP_012337558.1
• Uniprot ID: -
• Organism: Xylella fastidiosa M12
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 112216..123259

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
XFASM12_RS00465 (Xfasm12_0097)	-	113097..114125 (-)	1029	WP_004085534.1	right-handed parallel beta-helix repeat-containing protein	-
XFASM12_RS00470 (Xfasm12_0098)	-	114895..115926 (+)	1032	WP_004085533.1	nitronate monooxygenase family protein	-
XFASM12_RS00475 (Xfasm12_0099)	lexA	116399..117034 (+)	636	WP_004085532.1	transcriptional repressor LexA	-
XFASM12_RS00480 (Xfasm12_0100)	recA	117216..118259 (+)	1044	WP_012337558.1	recombinase RecA	Machinery gene
XFASM12_RS00485 (Xfasm12_0101)	alaS	118748..121402 (+)	2655	WP_004085530.1	alanine--tRNA ligase	-
XFASM12_RS00490 (Xfasm12_0102)	csrA	121541..121756 (+)	216	WP_004085529.1	carbon storage regulator CsrA	-
XFASM12_RS12995	-	122651..122779 (-)	129	WP_021358308.1	hypothetical protein	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37566.27 Da
• Isoelectric Point: 5.0879

>NTDB_id=30349 XFASM12_RS00480 WP_012337558.1 117216..118259(+) (recA) [Xylella fastidiosa M12]
MDENKKRALSVALSQIEKQFGKGSVMRMGDRVIEAVEAIPTGSLMLDLALGIGGLPKGRVVEIYGPESSGKTTLTLQAIA
QCQKKGGTAAFIDAEHALDPIYAGKLGVNVDDLLLSQPDTGEQALEIADMLVRSGSIDIMVIDSVAALTPKAEIEGEMGD
QLPGLQARLMSQALRKLTGNIKRSNTLVIFINQLRMKIGIMMPGQSPETTTGGNALKFYASVRLDIRRIGAIKKGDEIIG
NQTKIKVVKNKLAPPFKQVVTEILYGEGISREGELIEMGVEAKLVEKAGAWYSYGGERIGQGKDNARGYLRENPHLAAKL
EADLREKFEPTELSREEGDEDTLEDAM

Nucleotide

• Length: 1044 bp

>NTDB_id=30349 XFASM12_RS00480 WP_012337558.1 117216..118259(+) (recA) [Xylella fastidiosa M12]
ATGGATGAGAACAAGAAACGCGCCCTTTCTGTCGCTTTAAGCCAGATTGAAAAACAGTTCGGCAAGGGGTCTGTGATGCG
GATGGGCGATCGCGTGATCGAAGCCGTAGAGGCGATCCCGACAGGTTCGCTCATGTTGGATCTGGCCTTGGGGATAGGTG
GTTTGCCAAAGGGACGTGTCGTGGAAATCTATGGGCCGGAATCTTCTGGGAAGACCACATTGACTTTGCAGGCGATCGCT
CAATGCCAGAAGAAGGGAGGTACAGCAGCGTTCATTGATGCTGAGCATGCCTTGGATCCGATTTATGCGGGCAAGTTAGG
CGTCAATGTTGATGATTTGTTGTTGTCTCAGCCAGATACTGGGGAGCAGGCTCTGGAAATCGCTGACATGCTGGTGCGCT
CGGGGTCAATCGATATCATGGTTATTGATTCGGTTGCGGCACTCACGCCAAAGGCGGAGATTGAGGGTGAGATGGGAGAT
CAGTTGCCCGGTCTTCAGGCGCGATTGATGAGCCAGGCGCTGCGTAAATTGACCGGCAATATCAAGCGCTCTAATACGCT
GGTGATTTTTATAAACCAGTTGCGTATGAAAATTGGGATCATGATGCCGGGTCAAAGCCCTGAAACTACGACAGGGGGTA
ATGCGCTGAAGTTCTATGCTTCAGTGCGTTTGGATATTCGCCGTATTGGCGCGATCAAGAAGGGTGACGAAATTATCGGG
AATCAAACCAAAATCAAGGTTGTTAAAAACAAGTTGGCGCCTCCCTTCAAACAAGTCGTGACTGAGATTCTCTATGGTGA
AGGCATCAGTCGTGAAGGGGAATTGATTGAAATGGGCGTGGAGGCCAAGTTGGTTGAGAAAGCCGGCGCTTGGTATAGCT
ATGGTGGTGAGCGGATCGGGCAAGGAAAAGATAATGCGCGTGGCTATCTACGCGAAAACCCGCATCTTGCGGCCAAGCTT
GAGGCTGATTTGCGTGAGAAATTTGAGCCGACCGAGCTTTCTCGAGAAGAGGGCGATGAAGATACGCTCGAAGATGCAAT
GTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	73.333	95.101	0.697
recA	Acinetobacter baylyi ADP1	72.866	94.524	0.689
recA	Acinetobacter baumannii D1279779	71.903	95.389	0.686
recA	Pseudomonas stutzeri DSM 10701	71.951	94.524	0.68
recA	Vibrio cholerae strain A1552	70.552	93.948	0.663
recA	Vibrio cholerae O1 biovar El Tor strain E7946	70.552	93.948	0.663
recA	Neisseria gonorrhoeae MS11	66.374	98.559	0.654
recA	Neisseria gonorrhoeae MS11	66.374	98.559	0.654
recA	Neisseria gonorrhoeae strain FA1090	66.374	98.559	0.654
recA	Glaesserella parasuis strain SC1401	68.421	93.084	0.637
recA	Helicobacter pylori strain NCTC11637	62.048	95.677	0.594
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.377	96.254	0.591
recA	Helicobacter pylori 26695	61.446	95.677	0.588
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.75	92.219	0.588
recA	Latilactobacillus sakei subsp. sakei 23K	58.892	98.847	0.582
recA	Bacillus subtilis subsp. subtilis str. 168	61.846	93.66	0.579
recA	Streptococcus mutans UA159	59.697	95.101	0.568
recA	Streptococcus pneumoniae D39	60.061	94.524	0.568
recA	Streptococcus pneumoniae Rx1	60.061	94.524	0.568
recA	Streptococcus pneumoniae R6	60.061	94.524	0.568
recA	Streptococcus pneumoniae TIGR4	60.061	94.524	0.568
recA	Streptococcus pyogenes NZ131	59.394	95.101	0.565
recA	Streptococcus mitis SK321	59.451	94.524	0.562
recA	Streptococcus mitis NCTC 12261	59.146	94.524	0.559
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	58.896	93.948	0.553
recA	Lactococcus lactis subsp. cremoris KW2	58.462	93.66	0.548