Detailed information NTG0302967

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: DUN60_RS11765
• Genome accession: NZ_CP031055
• Coordinates: 2687499..2688539 (-)
• Length: 346 a.a.
• NCBI ID: WP_004735435.1
• Uniprot ID: A0A1R3F051
• Organism: Vibrio splendidus strain Vibrio sp
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2682499..2693539

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DUN60_RS11750	csrA	2682900..2683097 (-)	198	WP_004415691.1	carbon storage regulator CsrA	-
DUN60_RS11755	-	2683190..2684372 (-)	1183	Protein_2270	aspartate kinase	-
DUN60_RS11760	alaS	2684593..2687175 (-)	2583	WP_114634003.1	alanine--tRNA ligase	-
DUN60_RS11765	recA	2687499..2688539 (-)	1041	WP_004735435.1	recombinase RecA	Machinery gene
DUN60_RS11770	pncC	2688678..2689172 (-)	495	WP_114634004.1	nicotinamide-nucleotide amidase	-
DUN60_RS11775	mutS	2689296..2691857 (+)	2562	WP_114634005.1	DNA mismatch repair protein MutS	-
DUN60_RS11780	rpoS	2692002..2692982 (-)	981	WP_004735404.1	RNA polymerase sigma factor RpoS	Regulator

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 37350.86 Da
• Isoelectric Point: 5.0836

>NTDB_id=302967 DUN60_RS11765 WP_004735435.1 2687499..2688539(-) (recA) [Vibrio splendidus strain Vibrio sp]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEVYGPESSGKTTLTLELIA
AAQRVGKTCAFVDAEHALDPIYAQKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVLVIDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMAIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEVVGNE
TRIKVVKNKIAAPFKQAETQILYGKGFNREGELIDLGVKNKLVEKAGAWYSYKGDKIGQGKSNSCKHLRENPEIALELDT
KLRELLLTPAVLEEKGAEKEEENEEL

Nucleotide

• Length: 1041 bp

>NTDB_id=302967 DUN60_RS11765 WP_004735435.1 2687499..2688539(-) (recA) [Vibrio splendidus strain Vibrio sp]
ATGGACGAGAATAAACAAAAAGCGTTAGCTGCAGCCCTTGGTCAGATTGAAAAGCAATTTGGTAAAGGTTCTATCATGCG
TCTTGGTGATAACCGCACAATGGACGTAGAAACTATTTCTACAGGCTCTCTATCTCTAGATATCGCACTAGGTGCTGGTG
GCTTACCGATGGGACGTATCGTTGAAGTTTACGGTCCAGAATCATCAGGTAAAACAACGCTAACGCTTGAGCTTATTGCT
GCAGCGCAGAGAGTGGGTAAAACGTGTGCATTCGTGGATGCGGAACACGCACTTGACCCTATCTACGCTCAAAAGTTGGG
TGTTGATATCGATGCTTTGCTTGTATCTCAACCTGATACCGGTGAACAAGCTCTAGAAATCTGTGATGCACTGGCTCGTT
CAGGTGCTATCGATGTTCTTGTTATTGACTCGGTTGCTGCACTAACACCTAAAGCTGAGATCGAAGGCGAGATGGGCGAT
AGCCACATGGGTCTTCAAGCACGTATGCTTTCTCAAGCAATGCGTAAGCTGACAGGTAACCTTAAACAGTCTAACTGTAT
GGCTATCTTCATTAACCAAATTCGTATGAAAATTGGTGTAATGTTCGGTAACCCAGAAACAACAACCGGTGGTAATGCAC
TTAAGTTCTACGCATCTGTTCGTCTTGATATTCGCCGTACTGGTGCAATCAAAGATGGTGATGAAGTTGTTGGTAACGAG
ACTCGTATCAAGGTTGTTAAGAACAAGATTGCTGCACCATTCAAACAAGCTGAAACTCAAATCCTTTACGGTAAAGGCTT
CAACCGCGAAGGTGAGCTTATCGATTTAGGTGTTAAGAATAAGCTAGTAGAGAAAGCGGGCGCTTGGTACAGCTACAAAG
GCGACAAGATCGGCCAAGGTAAATCGAACTCTTGTAAGCACCTACGTGAAAACCCAGAGATCGCTCTGGAACTTGACACT
AAGCTTCGTGAATTGCTACTGACTCCTGCTGTTCTTGAAGAGAAAGGCGCAGAGAAAGAAGAAGAAAACGAAGAGCTATA
A

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: A0A1R3F051

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	90.274	95.087	0.858
recA	Vibrio cholerae O1 biovar El Tor strain E7946	90.274	95.087	0.858
recA	Pseudomonas stutzeri DSM 10701	75.529	95.665	0.723
recA	Acinetobacter baumannii D1279779	71.884	99.711	0.717
recA	Acinetobacter baylyi ADP1	71.098	100	0.711
recA	Neisseria gonorrhoeae MS11	66.667	100	0.671
recA	Neisseria gonorrhoeae MS11	66.667	100	0.671
recA	Neisseria gonorrhoeae strain FA1090	66.667	100	0.671
recA	Glaesserella parasuis strain SC1401	67.151	99.422	0.668
recA	Ralstonia pseudosolanacearum GMI1000	70.794	91.04	0.645
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.636	92.197	0.587
recA	Streptococcus mutans UA159	57.88	100	0.584
recA	Bacillus subtilis subsp. subtilis str. 168	62.617	92.775	0.581
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.819	95.665	0.572
recA	Streptococcus pneumoniae Rx1	60.991	93.353	0.569
recA	Streptococcus pneumoniae R6	60.991	93.353	0.569
recA	Streptococcus pneumoniae D39	60.991	93.353	0.569
recA	Streptococcus pneumoniae TIGR4	60.991	93.353	0.569
recA	Helicobacter pylori strain NCTC11637	60.615	93.931	0.569
recA	Helicobacter pylori 26695	60.308	93.931	0.566
recA	Streptococcus mitis NCTC 12261	60.681	93.353	0.566
recA	Streptococcus mitis SK321	60.372	93.353	0.564
recA	Latilactobacillus sakei subsp. sakei 23K	57.353	98.266	0.564
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.436	92.775	0.561
recA	Streptococcus pyogenes NZ131	59.077	93.931	0.555
recA	Lactococcus lactis subsp. cremoris KW2	57.895	93.353	0.54