Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | DT351_RS08260 | Genome accession | NZ_CP031003 |
| Coordinates | 1581577..1582635 (-) | Length | 352 a.a. |
| NCBI ID | WP_004270239.1 | Uniprot ID | A0AAJ0LFM4 |
| Organism | Latilactobacillus curvatus strain TMW 1.1928 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1545479..1593680 | 1581577..1582635 | within | 0 |
Gene organization within MGE regions
Location: 1545479..1593680
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DT351_RS08085 (DT351_08085) | - | 1546081..1546713 (-) | 633 | WP_004265951.1 | YfbR-like 5'-deoxynucleotidase | - |
| DT351_RS08090 (DT351_08090) | - | 1546826..1548550 (-) | 1725 | WP_116843691.1 | phospho-sugar mutase | - |
| DT351_RS08095 (DT351_08095) | trxB | 1548880..1549800 (-) | 921 | WP_004265965.1 | thioredoxin-disulfide reductase | - |
| DT351_RS08100 (DT351_08100) | - | 1549888..1550244 (-) | 357 | WP_004265931.1 | hypothetical protein | - |
| DT351_RS08105 (DT351_08105) | - | 1550410..1551438 (-) | 1029 | WP_004265961.1 | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | - |
| DT351_RS08110 (DT351_08110) | lgt | 1551466..1552299 (-) | 834 | WP_004265937.1 | prolipoprotein diacylglyceryl transferase | - |
| DT351_RS08115 (DT351_08115) | hprK | 1552666..1553607 (-) | 942 | WP_004265923.1 | HPr(Ser) kinase/phosphatase | - |
| DT351_RS08120 (DT351_08120) | - | 1553752..1554105 (-) | 354 | WP_004265953.1 | phage holin family protein | - |
| DT351_RS08125 (DT351_08125) | - | 1554105..1554404 (-) | 300 | WP_004265882.1 | hypothetical protein | - |
| DT351_RS08130 (DT351_08130) | - | 1554404..1554637 (-) | 234 | WP_035186190.1 | PspC domain-containing protein | - |
| DT351_RS08135 (DT351_08135) | liaX | 1554665..1556119 (-) | 1455 | WP_004265927.1 | daptomycin-sensing surface protein LiaX | - |
| DT351_RS08140 (DT351_08140) | - | 1556345..1557019 (+) | 675 | WP_076648203.1 | helix-turn-helix domain-containing protein | - |
| DT351_RS08145 (DT351_08145) | - | 1557016..1557897 (+) | 882 | WP_089542300.1 | IS3 family transposase | - |
| DT351_RS08150 (DT351_08150) | - | 1557970..1558440 (-) | 471 | WP_004270223.1 | nucleoside 2-deoxyribosyltransferase | - |
| DT351_RS08155 (DT351_08155) | phoU | 1558515..1559192 (-) | 678 | WP_004270249.1 | phosphate signaling complex protein PhoU | - |
| DT351_RS08160 (DT351_08160) | pstB | 1559211..1559969 (-) | 759 | WP_004270242.1 | phosphate ABC transporter ATP-binding protein PstB | - |
| DT351_RS08165 (DT351_08165) | pstB | 1559990..1560799 (-) | 810 | WP_004270235.1 | phosphate ABC transporter ATP-binding protein PstB | - |
| DT351_RS08170 (DT351_08170) | pstA | 1560809..1561693 (-) | 885 | WP_004270246.1 | phosphate ABC transporter permease PstA | - |
| DT351_RS08175 (DT351_08175) | pstC | 1561693..1562616 (-) | 924 | WP_004270247.1 | phosphate ABC transporter permease subunit PstC | - |
| DT351_RS08180 (DT351_08180) | - | 1562627..1563487 (-) | 861 | WP_065825893.1 | phosphate ABC transporter substrate-binding protein PstS family protein | - |
| DT351_RS08185 (DT351_08185) | - | 1563582..1565243 (-) | 1662 | WP_065825894.1 | ATP-binding protein | - |
| DT351_RS08190 (DT351_08190) | - | 1565230..1565943 (-) | 714 | WP_004270257.1 | response regulator transcription factor | - |
| DT351_RS08195 (DT351_08195) | - | 1565964..1567094 (-) | 1131 | WP_223315838.1 | PDZ domain-containing protein | - |
| DT351_RS08200 (DT351_08200) | - | 1567426..1568478 (+) | 1053 | WP_089541951.1 | IS30 family transposase | - |
| DT351_RS08205 (DT351_08205) | ftsX | 1568725..1569612 (-) | 888 | WP_004270230.1 | permease-like cell division protein FtsX | - |
| DT351_RS08210 (DT351_08210) | ftsE | 1569602..1570288 (-) | 687 | WP_076787035.1 | cell division ATP-binding protein FtsE | - |
| DT351_RS08220 (DT351_08220) | secA | 1571607..1573970 (-) | 2364 | WP_076787039.1 | preprotein translocase subunit SecA | - |
| DT351_RS08225 (DT351_08225) | raiA | 1574199..1574744 (-) | 546 | WP_004270226.1 | ribosome-associated translation inhibitor RaiA | - |
| DT351_RS08230 (DT351_08230) | comFC | 1574870..1575400 (-) | 531 | WP_162875352.1 | ComF family protein | Machinery gene |
| DT351_RS08235 (DT351_08235) | comFA | 1575544..1576878 (-) | 1335 | WP_100069772.1 | DEAD/DEAH box helicase | Machinery gene |
| DT351_RS08240 (DT351_08240) | - | 1576935..1577597 (+) | 663 | WP_116843692.1 | YigZ family protein | - |
| DT351_RS08245 (DT351_08245) | - | 1577622..1578710 (-) | 1089 | WP_004270225.1 | MraY family glycosyltransferase | - |
| DT351_RS08250 (DT351_08250) | hemH | 1578820..1579771 (-) | 952 | Protein_1613 | ferrochelatase | - |
| DT351_RS08255 (DT351_08255) | rny | 1579771..1581333 (-) | 1563 | WP_116843693.1 | ribonuclease Y | - |
| DT351_RS08260 (DT351_08260) | recA | 1581577..1582635 (-) | 1059 | WP_004270239.1 | recombinase RecA | Machinery gene |
| DT351_RS08265 (DT351_08265) | pgsA | 1582827..1583411 (-) | 585 | WP_004270254.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| DT351_RS08270 (DT351_08270) | - | 1583434..1584357 (-) | 924 | WP_004270224.1 | helix-turn-helix domain-containing protein | - |
| DT351_RS08275 (DT351_08275) | - | 1584440..1585168 (-) | 729 | WP_004270241.1 | SDR family oxidoreductase | - |
| DT351_RS08280 (DT351_08280) | - | 1585161..1586471 (-) | 1311 | WP_076787044.1 | pitrilysin family protein | - |
| DT351_RS08285 (DT351_08285) | - | 1586461..1587732 (-) | 1272 | WP_076787046.1 | pitrilysin family protein | - |
| DT351_RS08290 (DT351_08290) | - | 1587899..1588792 (-) | 894 | WP_116843694.1 | IS3 family transposase | - |
| DT351_RS08295 (DT351_08295) | - | 1588789..1589463 (-) | 675 | WP_089542092.1 | helix-turn-helix domain-containing protein | - |
| DT351_RS08300 (DT351_08300) | - | 1589679..1592027 (-) | 2349 | WP_076786358.1 | DNA translocase FtsK | - |
| DT351_RS08305 (DT351_08305) | - | 1592169..1592570 (-) | 402 | WP_004270251.1 | DUF1149 family protein | - |
| DT351_RS08310 (DT351_08310) | trmL | 1592583..1593092 (-) | 510 | WP_004270256.1 | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | - |
Sequence
Protein
Download Length: 352 a.a. Molecular weight: 37933.82 Da Isoelectric Point: 4.6131
>NTDB_id=302786 DT351_RS08260 WP_004270239.1 1581577..1582635(-) (recA) [Latilactobacillus curvatus strain TMW 1.1928]
MAKDERQAALDAALKKIEKNFGKGSIMRMGEKVDTQVSTVSSGSLALDEALGVGGYPRGRIVEIYGPESSGKTTVALHAV
AEVQKQGGTAAYIDAENAMDPKYATALGVNIDDLLLSQPDTGEQGLEIADALVSSGAVDILVVDSVAALVPRAEIEGEMG
DAHVGLQARLMSQALRKLSGTINKTKTIALFINQIREKVGVMFGNPEVTPGGRALKFYSTVRLEVRRAETIKNGTDMIGN
RARIKVVKNKVAPPFKVAEVDIMYGQGISQTGELVDMAVEKDIINKSGSWYSYGDERIGQGRENAKNYLADHPEVQDEVR
LKVREAYGISDVPVDESDETQLDVFTDDDSNE
MAKDERQAALDAALKKIEKNFGKGSIMRMGEKVDTQVSTVSSGSLALDEALGVGGYPRGRIVEIYGPESSGKTTVALHAV
AEVQKQGGTAAYIDAENAMDPKYATALGVNIDDLLLSQPDTGEQGLEIADALVSSGAVDILVVDSVAALVPRAEIEGEMG
DAHVGLQARLMSQALRKLSGTINKTKTIALFINQIREKVGVMFGNPEVTPGGRALKFYSTVRLEVRRAETIKNGTDMIGN
RARIKVVKNKVAPPFKVAEVDIMYGQGISQTGELVDMAVEKDIINKSGSWYSYGDERIGQGRENAKNYLADHPEVQDEVR
LKVREAYGISDVPVDESDETQLDVFTDDDSNE
Nucleotide
Download Length: 1059 bp
>NTDB_id=302786 DT351_RS08260 WP_004270239.1 1581577..1582635(-) (recA) [Latilactobacillus curvatus strain TMW 1.1928]
TTGGCTAAAGATGAAAGACAAGCAGCCTTAGATGCTGCATTAAAGAAAATTGAAAAGAATTTTGGTAAGGGCTCAATCAT
GCGAATGGGTGAAAAGGTTGATACACAAGTCTCAACTGTTTCATCTGGTTCCCTTGCATTGGATGAAGCGCTCGGTGTAG
GTGGGTATCCACGTGGCCGAATCGTTGAAATTTATGGTCCTGAAAGTTCAGGTAAAACAACCGTTGCTTTACATGCTGTT
GCCGAAGTGCAAAAGCAAGGTGGGACTGCTGCTTATATCGATGCTGAAAATGCAATGGATCCTAAGTATGCAACTGCCCT
CGGGGTTAATATTGACGATTTACTCTTGTCACAACCAGATACTGGGGAACAAGGCTTAGAAATCGCCGATGCCTTAGTTT
CAAGTGGGGCTGTTGATATTTTAGTTGTCGATTCAGTCGCAGCCTTAGTGCCTCGTGCTGAAATCGAAGGCGAAATGGGT
GACGCGCATGTTGGGTTACAAGCCCGCTTGATGTCACAAGCCTTACGGAAATTATCAGGAACAATCAATAAAACAAAGAC
GATTGCGTTATTCATTAACCAAATCCGTGAAAAAGTCGGCGTGATGTTCGGGAACCCCGAAGTCACACCTGGTGGTCGCG
CATTGAAATTCTATTCAACCGTTCGGCTTGAAGTCCGGCGTGCTGAAACCATCAAGAATGGGACCGATATGATCGGGAAC
CGTGCGCGGATTAAAGTGGTTAAGAATAAGGTGGCACCACCATTTAAAGTGGCTGAAGTCGACATTATGTATGGTCAAGG
GATCTCACAAACGGGTGAACTGGTCGACATGGCGGTCGAAAAGGACATTATTAATAAGAGTGGGTCATGGTATTCCTATG
GGGATGAACGCATTGGTCAAGGACGTGAGAACGCGAAGAATTACTTGGCTGATCATCCAGAAGTTCAAGATGAAGTCCGG
CTTAAAGTTCGGGAAGCATATGGTATTTCGGATGTCCCAGTAGATGAAAGCGATGAAACACAACTCGACGTCTTTACGGA
TGACGATTCAAACGAATAA
TTGGCTAAAGATGAAAGACAAGCAGCCTTAGATGCTGCATTAAAGAAAATTGAAAAGAATTTTGGTAAGGGCTCAATCAT
GCGAATGGGTGAAAAGGTTGATACACAAGTCTCAACTGTTTCATCTGGTTCCCTTGCATTGGATGAAGCGCTCGGTGTAG
GTGGGTATCCACGTGGCCGAATCGTTGAAATTTATGGTCCTGAAAGTTCAGGTAAAACAACCGTTGCTTTACATGCTGTT
GCCGAAGTGCAAAAGCAAGGTGGGACTGCTGCTTATATCGATGCTGAAAATGCAATGGATCCTAAGTATGCAACTGCCCT
CGGGGTTAATATTGACGATTTACTCTTGTCACAACCAGATACTGGGGAACAAGGCTTAGAAATCGCCGATGCCTTAGTTT
CAAGTGGGGCTGTTGATATTTTAGTTGTCGATTCAGTCGCAGCCTTAGTGCCTCGTGCTGAAATCGAAGGCGAAATGGGT
GACGCGCATGTTGGGTTACAAGCCCGCTTGATGTCACAAGCCTTACGGAAATTATCAGGAACAATCAATAAAACAAAGAC
GATTGCGTTATTCATTAACCAAATCCGTGAAAAAGTCGGCGTGATGTTCGGGAACCCCGAAGTCACACCTGGTGGTCGCG
CATTGAAATTCTATTCAACCGTTCGGCTTGAAGTCCGGCGTGCTGAAACCATCAAGAATGGGACCGATATGATCGGGAAC
CGTGCGCGGATTAAAGTGGTTAAGAATAAGGTGGCACCACCATTTAAAGTGGCTGAAGTCGACATTATGTATGGTCAAGG
GATCTCACAAACGGGTGAACTGGTCGACATGGCGGTCGAAAAGGACATTATTAATAAGAGTGGGTCATGGTATTCCTATG
GGGATGAACGCATTGGTCAAGGACGTGAGAACGCGAAGAATTACTTGGCTGATCATCCAGAAGTTCAAGATGAAGTCCGG
CTTAAAGTTCGGGAAGCATATGGTATTTCGGATGTCCCAGTAGATGAAAGCGATGAAACACAACTCGACGTCTTTACGGA
TGACGATTCAAACGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.