Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | C7K40_RS08980 | Genome accession | NZ_CP027771 |
| Coordinates | 1784559..1785695 (-) | Length | 378 a.a. |
| NCBI ID | WP_023612663.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain DMG1800716 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1774739..1803932 | 1784559..1785695 | within | 0 |
| IS/Tn | 1782604..1783737 | 1784559..1785695 | flank | 822 |
Gene organization within MGE regions
Location: 1774739..1803932
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7K40_RS08925 (C7K40_08920) | nrdG | 1774739..1775353 (-) | 615 | WP_002982219.1 | anaerobic ribonucleoside-triphosphate reductase activating protein | - |
| C7K40_RS08930 (C7K40_08925) | - | 1775353..1775862 (-) | 510 | WP_011285262.1 | GNAT family N-acetyltransferase | - |
| C7K40_RS08935 (C7K40_08930) | - | 1775871..1776806 (-) | 936 | WP_002992828.1 | Gfo/Idh/MocA family oxidoreductase | - |
| C7K40_RS09530 | - | 1776835..1776981 (-) | 147 | WP_002982210.1 | hypothetical protein | - |
| C7K40_RS08940 (C7K40_08935) | nrdD | 1777163..1779361 (-) | 2199 | WP_002982204.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| C7K40_RS08945 (C7K40_08940) | - | 1779458..1781017 (-) | 1560 | WP_023613027.1 | hypothetical protein | - |
| C7K40_RS08950 (C7K40_08945) | - | 1781430..1781735 (-) | 306 | WP_002982199.1 | DUF1292 domain-containing protein | - |
| C7K40_RS08955 (C7K40_08950) | ruvX | 1781747..1782166 (-) | 420 | WP_002982196.1 | Holliday junction resolvase RuvX | - |
| C7K40_RS08960 (C7K40_08955) | - | 1782163..1782432 (-) | 270 | WP_002982194.1 | IreB family regulatory phosphoprotein | - |
| C7K40_RS08970 (C7K40_08965) | - | 1782604..1783737 (-) | 1134 | WP_032462983.1 | ISAs1-like element IS1548 family transposase | - |
| C7K40_RS08975 (C7K40_08970) | spx | 1783870..1784268 (-) | 399 | WP_002982188.1 | transcriptional regulator Spx | - |
| C7K40_RS08980 (C7K40_08975) | recA | 1784559..1785695 (-) | 1137 | WP_023612663.1 | recombinase RecA | Machinery gene |
| C7K40_RS08985 (C7K40_08980) | cinA | 1785784..1787055 (-) | 1272 | WP_023612670.1 | competence/damage-inducible protein A | Machinery gene |
| C7K40_RS08990 (C7K40_08985) | - | 1787124..1787684 (-) | 561 | WP_023612646.1 | DNA-3-methyladenine glycosylase I | - |
| C7K40_RS08995 (C7K40_08990) | ruvA | 1787694..1788290 (-) | 597 | WP_002982180.1 | Holliday junction branch migration protein RuvA | - |
| C7K40_RS09000 (C7K40_08995) | - | 1788292..1789512 (-) | 1221 | WP_002992187.1 | MFS transporter | - |
| C7K40_RS09005 (C7K40_09000) | mutL | 1789523..1791505 (-) | 1983 | WP_023612647.1 | DNA mismatch repair endonuclease MutL | - |
| C7K40_RS09010 (C7K40_09005) | - | 1791600..1792751 (-) | 1152 | WP_023612650.1 | site-specific integrase | - |
| C7K40_RS09770 (C7K40_09010) | - | 1793073..1793216 (+) | 144 | WP_011185066.1 | putative holin-like toxin | - |
| C7K40_RS09750 | - | 1794117..1794626 (-) | 510 | WP_003049854.1 | helix-turn-helix domain-containing protein | - |
| C7K40_RS09025 (C7K40_09020) | - | 1794838..1795026 (+) | 189 | WP_003049853.1 | helix-turn-helix domain-containing protein | - |
| C7K40_RS09030 (C7K40_09025) | - | 1795042..1795650 (+) | 609 | WP_014407937.1 | phage repressor protein | - |
| C7K40_RS09035 (C7K40_09030) | - | 1795671..1796078 (+) | 408 | WP_002992501.1 | hypothetical protein | - |
| C7K40_RS09040 (C7K40_09035) | - | 1796092..1796721 (+) | 630 | WP_023612654.1 | Rha family transcriptional regulator | - |
| C7K40_RS09045 (C7K40_09040) | - | 1796966..1797298 (+) | 333 | WP_011285276.1 | hypothetical protein | - |
| C7K40_RS09535 | - | 1797295..1797435 (+) | 141 | WP_014612652.1 | hypothetical protein | - |
| C7K40_RS09050 (C7K40_09045) | - | 1797416..1797613 (+) | 198 | WP_022555260.1 | hypothetical protein | - |
| C7K40_RS09055 (C7K40_09050) | - | 1797626..1797988 (+) | 363 | WP_000206026.1 | hypothetical protein | - |
| C7K40_RS09060 (C7K40_09055) | - | 1797985..1798314 (+) | 330 | WP_000174505.1 | hypothetical protein | - |
| C7K40_RS09065 (C7K40_09060) | - | 1798317..1798589 (+) | 273 | WP_014407941.1 | hypothetical protein | - |
| C7K40_RS09070 (C7K40_09065) | - | 1798582..1799448 (+) | 867 | WP_032466280.1 | primase alpha helix C-terminal domain-containing protein | - |
| C7K40_RS09075 (C7K40_09070) | - | 1799417..1801105 (+) | 1689 | WP_023612662.1 | phage/plasmid primase, P4 family | - |
| C7K40_RS09080 (C7K40_09075) | - | 1801383..1801556 (+) | 174 | WP_000694577.1 | hypothetical protein | - |
| C7K40_RS09540 | - | 1801562..1801735 (+) | 174 | WP_014635784.1 | hypothetical protein | - |
| C7K40_RS09085 (C7K40_09080) | - | 1801737..1802246 (+) | 510 | WP_023612645.1 | hypothetical protein | - |
| C7K40_RS09090 (C7K40_09085) | - | 1802321..1802809 (+) | 489 | WP_023612640.1 | hypothetical protein | - |
| C7K40_RS09100 (C7K40_09095) | - | 1803212..1803574 (+) | 363 | WP_003058730.1 | DUF1492 domain-containing protein | - |
| C7K40_RS09105 (C7K40_09100) | - | 1803549..1803932 (+) | 384 | WP_023612665.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
Sequence
Protein
Download Length: 378 a.a. Molecular weight: 40644.27 Da Isoelectric Point: 4.8451
>NTDB_id=280470 C7K40_RS08980 WP_023612663.1 1784559..1785695(-) (recA) [Streptococcus pyogenes strain DMG1800716]
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKRYLADHPELFDEIDRKVRVKFGLLEESEEESAMAVASEEIDDLALDLDNGIEIED
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKRYLADHPELFDEIDRKVRVKFGLLEESEEESAMAVASEEIDDLALDLDNGIEIED
Nucleotide
Download Length: 1137 bp
>NTDB_id=280470 C7K40_RS08980 WP_023612663.1 1784559..1785695(-) (recA) [Streptococcus pyogenes strain DMG1800716]
TTGGCAAAAAAATTAAAAAAGAATGAAGAAATCACTAAGAAGTTTGGTGACGAACGTCGCAAAGCCCTTGATGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGCGCAGTGATGCGATTAGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA
GTTCAGGAAGTCTAGCTCTTGATATTGCGCTTGGAGCTGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGTCCA
GAGTCTTCCGGTAAAACGACTGTGGCTTTACATGCTGTAGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA
TGCCGAGCATGCGCTTGATCCAGCTTATGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTCTTGTCTCAACCAGATT
CTGGAGAACAAGGACTTGAAATTGCAGGTAAATTGATTGATTCTGGTGCGGTTGATCTGGTTGTTGTCGATTCAGTAGCA
GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC
CATGCGTAAATTATCAGCTTCTATTAATAAAACAAAAACTATCGCTATCTTTATTAACCAATTGCGTGAAAAAGTTGGTG
TGATGTTTGGAAATCCTGAAACAACACCAGGTGGTCGAGCTTTGAAATTCTATGCTTCTGTTCGGTTGGATGTGCGTGGA
ACAACTCAAATTAAAGGAACTGGTGACCAAAAAGATAGCAGCATTGGTAAGGAGACCAAAATCAAGGTTGTTAAAAACAA
GGTCGCTCCGCCATTTAAGGTAGCAGAAGTTGAAATCATGTATGGGGAAGGTATTTCTCGTACAGGGGAGCTTGTGAAAA
TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATGGTGAGAAGATTGGCCAAGGTTCTGAA
AATGCTAAGCGTTATTTGGCCGATCATCCAGAATTGTTTGATGAAATCGACCGTAAAGTACGTGTTAAATTTGGTTTGCT
TGAAGAAAGCGAAGAAGAATCTGCTATGGCAGTAGCATCAGAAGAAATCGATGATCTTGCTTTAGATTTAGATAATGGTA
TTGAAATTGAAGATTAA
TTGGCAAAAAAATTAAAAAAGAATGAAGAAATCACTAAGAAGTTTGGTGACGAACGTCGCAAAGCCCTTGATGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGCGCAGTGATGCGATTAGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA
GTTCAGGAAGTCTAGCTCTTGATATTGCGCTTGGAGCTGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGTCCA
GAGTCTTCCGGTAAAACGACTGTGGCTTTACATGCTGTAGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA
TGCCGAGCATGCGCTTGATCCAGCTTATGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTCTTGTCTCAACCAGATT
CTGGAGAACAAGGACTTGAAATTGCAGGTAAATTGATTGATTCTGGTGCGGTTGATCTGGTTGTTGTCGATTCAGTAGCA
GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC
CATGCGTAAATTATCAGCTTCTATTAATAAAACAAAAACTATCGCTATCTTTATTAACCAATTGCGTGAAAAAGTTGGTG
TGATGTTTGGAAATCCTGAAACAACACCAGGTGGTCGAGCTTTGAAATTCTATGCTTCTGTTCGGTTGGATGTGCGTGGA
ACAACTCAAATTAAAGGAACTGGTGACCAAAAAGATAGCAGCATTGGTAAGGAGACCAAAATCAAGGTTGTTAAAAACAA
GGTCGCTCCGCCATTTAAGGTAGCAGAAGTTGAAATCATGTATGGGGAAGGTATTTCTCGTACAGGGGAGCTTGTGAAAA
TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATGGTGAGAAGATTGGCCAAGGTTCTGAA
AATGCTAAGCGTTATTTGGCCGATCATCCAGAATTGTTTGATGAAATCGACCGTAAAGTACGTGTTAAATTTGGTTTGCT
TGAAGAAAGCGAAGAAGAATCTGCTATGGCAGTAGCATCAGAAGAAATCGATGATCTTGCTTTAGATTTAGATAATGGTA
TTGAAATTGAAGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.