Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   SSA_RS10975 Genome accession   NC_009009
Coordinates   2240051..2241199 (-) Length   382 a.a.
NCBI ID   WP_011837638.1    Uniprot ID   A3CR02
Organism   Streptococcus sanguinis SK36     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2235051..2246199
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSA_RS10935 (SSA_2235) - 2235061..2235540 (-) 480 WP_002917849.1 SP_0198 family lipoprotein -
  SSA_RS10940 (SSA_2237) - 2235598..2236830 (-) 1233 WP_011837634.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -
  SSA_RS10945 (SSA_2239) - 2237012..2237323 (-) 312 WP_002894073.1 DUF1292 domain-containing protein -
  SSA_RS10950 (SSA_2240) ruvX 2237348..2237767 (-) 420 WP_011837635.1 Holliday junction resolvase RuvX -
  SSA_RS10955 (SSA_2241) - 2237767..2238033 (-) 267 WP_002894075.1 IreB family regulatory phosphoprotein -
  SSA_RS10960 (SSA_2242) - 2238211..2238753 (-) 543 WP_011837636.1 hypothetical protein -
  SSA_RS10965 (SSA_2243) - 2238859..2239431 (-) 573 WP_011837637.1 SP0191 family lipoprotein -
  SSA_RS10970 (SSA_2244) spx 2239567..2239965 (-) 399 WP_002894078.1 transcriptional regulator Spx -
  SSA_RS10975 (SSA_2245) recA 2240051..2241199 (-) 1149 WP_011837638.1 recombinase RecA Machinery gene
  SSA_RS10980 (SSA_2246) cinA 2241258..2242514 (-) 1257 WP_033179233.1 competence/damage-inducible protein A Machinery gene
  SSA_RS10985 (SSA_2247) - 2242785..2243195 (+) 411 WP_011837640.1 helix-turn-helix domain-containing protein -
  SSA_RS10990 (SSA_2248) - 2243408..2243899 (-) 492 WP_011837641.1 hypothetical protein -
  SSA_RS10995 (SSA_2249) - 2243896..2244519 (-) 624 WP_011837642.1 ATP-binding cassette domain-containing protein -

Sequence

Protein


Download         Length: 382 a.a.        Molecular weight: 41119.77 Da        Isoelectric Point: 4.8420

>NTDB_id=27551 SSA_RS10975 WP_011837638.1 2240051..2241199(-) (recA) [Streptococcus sanguinis SK36]
MAKKQKKLDEISKKFGDERQKALDNALKNIEKDFGKGAIMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPSYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDEKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELIKIATDLDIIKKAGAWYSYNDEKIGQGSE
NAKKYLADHPEVFGEIDRQVRVRYGLIDGDDMAEAVGNKAESPVETLEEVTLDLDDAIEIEE

Nucleotide


Download         Length: 1149 bp        

>NTDB_id=27551 SSA_RS10975 WP_011837638.1 2240051..2241199(-) (recA) [Streptococcus sanguinis SK36]
ATGGCAAAGAAACAAAAAAAATTAGATGAAATCTCAAAGAAATTCGGCGATGAGCGCCAAAAAGCCTTGGATAATGCTCT
TAAAAACATTGAAAAGGACTTTGGTAAGGGAGCCATTATGCGTCTTGGCGAGCGAGCAGAGCAAAAGGTTCAAGTCATGA
GTTCTGGCTCTTTAGCTTTGGATATTGCTCTTGGTGCTGGTGGTTACCCTAAGGGACGGATTATTGAGATTTACGGACCA
GAGTCTTCTGGTAAGACAACCGTTGCTCTTCACGCCGTTGCTCAAGCGCAAAAAGAAGGTGGTATCGCAGCCTTTATCGA
TGCTGAGCATGCTTTGGATCCGTCATACGCGGCTGCTCTGGGTGTTAATATTGATGAGTTGCTACTGTCTCAACCTGACT
CTGGGGAACAGGGACTGGAAATTGCTGGTAAGCTGATTGACTCAGGTGCGGTGGATTTGGTGGTTGTGGACTCAGTTGCA
GCCCTTGTACCTCGTGCGGAAATCGATGGCGATATCGGTGACAGCCATGTCGGCTTGCAGGCTCGGATGATGAGCCAGGC
TATGCGCAAACTGTCTGCTTCTATCAACAAAACTAAGACAATTGCGATTTTCATTAACCAGCTGCGTGAAAAAGTTGGGG
TTATGTTTGGTAATCCTGAAACGACACCAGGCGGCCGTGCACTCAAGTTCTATGCTTCTGTCCGTCTGGATGTCCGTGGT
AATACACAAATCAAAGGAACTGGTGATGAGAAGGATACCAATGTTGGTAAAGAAACCAAGATCAAGGTCGTTAAAAATAA
GGTAGCTCCGCCATTCAAAGAAGCCTTCGTGGAAATCATGTACGGAGAAGGTATTTCTAAGACAGGTGAGCTGATTAAGA
TTGCGACTGATTTGGACATCATCAAGAAAGCTGGCGCTTGGTACTCCTACAATGATGAAAAAATCGGCCAAGGTTCTGAA
AATGCTAAGAAGTACTTAGCTGATCATCCAGAAGTCTTTGGTGAAATTGACCGTCAGGTTCGTGTCCGCTACGGTTTGAT
TGATGGAGACGATATGGCAGAAGCGGTTGGCAATAAGGCTGAGAGTCCTGTAGAAACGCTGGAAGAAGTGACTCTAGATT
TGGACGATGCCATTGAAATTGAAGAGTAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(21-286)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3CR02

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Streptococcus mitis NCTC 12261

89.764

99.738

0.895
  recA Streptococcus mitis SK321

89.764

99.738

0.895
  recA Streptococcus pneumoniae D39

88.052

100

0.887
  recA Streptococcus pneumoniae R6

88.052

100

0.887
  recA Streptococcus pneumoniae TIGR4

88.052

100

0.887
  recA Streptococcus pneumoniae Rx1

88.052

100

0.887
  recA Streptococcus pyogenes NZ131

86.126

100

0.861
  recA Streptococcus mutans UA159

85.117

100

0.853
  recA Lactococcus lactis subsp. cremoris KW2

77.273

92.147

0.712
  recA Latilactobacillus sakei subsp. sakei 23K

70.783

86.911

0.615
  recA Bacillus subtilis subsp. subtilis str. 168

69.909

86.126

0.602
  recA Neisseria gonorrhoeae MS11

59.605

92.67

0.552
  recA Neisseria gonorrhoeae strain FA1090

59.605

92.67

0.552
  recA Neisseria gonorrhoeae MS11

59.605

92.67

0.552
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

64.087

84.555

0.542
  recA Glaesserella parasuis strain SC1401

60

89.005

0.534
  recA Vibrio cholerae strain A1552

62.462

85.079

0.531
  recA Vibrio cholerae O1 biovar El Tor strain E7946

62.462

85.079

0.531
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

61.702

86.126

0.531
  recA Acinetobacter baumannii D1279779

61.846

85.079

0.526
  recA Acinetobacter baylyi ADP1

61.231

85.079

0.521
  recA Helicobacter pylori 26695

55.307

93.717

0.518
  recA Helicobacter pylori strain NCTC11637

55.307

93.717

0.518
  recA Pseudomonas stutzeri DSM 10701

58.716

85.602

0.503
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

58.006

86.649

0.503
  recA Ralstonia pseudosolanacearum GMI1000

60.252

82.984

0.5

Multiple sequence alignment