Detailed information NTG0027395

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: NATL1_RS09110
• Genome accession: NC_008819
• Coordinates: 1650618..1651751 (+)
• Length: 377 a.a.
• NCBI ID: WP_011824518.1
• Uniprot ID: A2C503
• Organism: Prochlorococcus marinus str. NATL1A
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1645618..1656751

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NATL1_RS09075 (NATL1_20011)	-	1645993..1646304 (-)	312	WP_011295471.1	50S ribosomal protein L23	-
NATL1_RS09080 (NATL1_20021)	rplD	1646297..1646932 (-)	636	WP_041700635.1	50S ribosomal protein L4	-
NATL1_RS09085 (NATL1_20031)	rplC	1646932..1647588 (-)	657	WP_011824514.1	50S ribosomal protein L3	-
NATL1_RS09090 (NATL1_20041)	-	1647959..1648423 (+)	465	WP_011824515.1	NAD(P)H-quinone oxidoreductase subunit N	-
NATL1_RS09095 (NATL1_20051)	-	1648436..1649458 (+)	1023	WP_011824516.1	LdpA C-terminal domain-containing domain	-
NATL1_RS09105 (NATL1_20061)	-	1649726..1650505 (+)	780	WP_011824517.1	HAD family hydrolase	-
NATL1_RS09110 (NATL1_20071)	recA	1650618..1651751 (+)	1134	WP_011824518.1	recombinase RecA	Machinery gene
NATL1_RS09115 (NATL1_20081)	-	1651771..1652010 (-)	240	WP_011824519.1	DUF2839 domain-containing protein	-
NATL1_RS09120 (NATL1_20091)	-	1652048..1653496 (-)	1449	WP_011824520.1	helicase	-
NATL1_RS09125 (NATL1_20101)	-	1653570..1654445 (+)	876	WP_011824521.1	prephenate/arogenate dehydrogenase	-
NATL1_RS09130 (NATL1_20111)	crtD	1654438..1655955 (-)	1518	WP_011824522.1	C-3',4' desaturase CrtD	-

Sequence

Protein

• Length: 377 a.a.
• Molecular weight: 40381.01 Da
• Isoelectric Point: 7.2479

>NTDB_id=27395 NATL1_RS09110 WP_011824518.1 1650618..1651751(+) (recA) [Prochlorococcus marinus str. NATL1A]
MSNEGKPLQSTESTKIDAKSGEKEKALSLVVGQIERNFGKGSIMRLGDASKMRVETISTGALTLDLALGGGYPKGRVIEV
YGPESSGKTTLTLHAIAEIQRNGGVAAFVDAEHALDPVYAASLGVDVENLLVSQPDTGEMALEIVDQLIRSAAVDLVVVD
SVAALTPRSEIEGEMGDHSVGAQARLMSQAMRKITGNIGKSGCTVIFLNQLRLKIGITYGNPETTTGGNALKFYASVRLD
IRRIQTLKRGTEEYGIRAKVKVAKNKVAPPFRIAEFDILFGKGISTLGCLLDLADETNVVTRKGAWYSYEGDNIGQGRDN
TITWLEQNPESKEIIEKLVKEKLTEGSEVSANSMRPLASAARQASSRPKLSQVSANG

Nucleotide

• Length: 1134 bp

>NTDB_id=27395 NATL1_RS09110 WP_011824518.1 1650618..1651751(+) (recA) [Prochlorococcus marinus str. NATL1A]
ATGTCAAACGAAGGTAAGCCACTCCAATCAACTGAATCTACGAAAATAGACGCAAAATCTGGAGAGAAAGAAAAAGCATT
GAGCTTGGTTGTTGGGCAAATAGAACGCAATTTCGGAAAGGGTTCGATCATGCGTCTTGGCGACGCGTCAAAAATGCGGG
TAGAAACAATATCTACGGGTGCTTTAACTCTTGATTTAGCTCTTGGTGGAGGCTATCCCAAAGGACGTGTAATTGAAGTT
TATGGTCCCGAAAGTTCTGGAAAAACAACGCTGACATTACATGCAATAGCAGAGATTCAACGTAACGGCGGAGTTGCTGC
TTTTGTAGATGCAGAACATGCTCTTGACCCAGTCTATGCAGCTTCGCTTGGTGTTGATGTAGAAAATCTTCTCGTATCTC
AACCGGATACAGGAGAGATGGCATTGGAAATCGTTGACCAACTTATTAGATCTGCTGCAGTCGATCTAGTAGTTGTTGAT
TCAGTCGCTGCACTGACGCCCCGCTCAGAGATAGAAGGAGAAATGGGTGATCATTCAGTAGGTGCTCAAGCTCGTCTAAT
GAGTCAAGCAATGAGAAAAATTACTGGAAACATTGGAAAGTCTGGTTGCACAGTAATTTTCTTAAATCAATTACGTCTAA
AAATTGGTATTACATATGGGAATCCAGAAACAACAACTGGTGGAAACGCTCTTAAATTTTATGCCTCTGTAAGATTAGAT
ATTCGTCGTATTCAAACTTTAAAGAGAGGAACTGAAGAATATGGAATTCGTGCAAAAGTGAAAGTCGCAAAGAACAAAGT
TGCGCCTCCATTTCGAATAGCCGAATTTGATATTCTTTTTGGGAAAGGAATTAGTACTCTTGGTTGTCTTCTTGATTTAG
CAGATGAGACTAATGTTGTTACTCGTAAAGGAGCTTGGTATAGCTATGAAGGTGACAATATTGGGCAAGGGAGAGACAAC
ACCATTACTTGGCTTGAACAAAATCCTGAATCAAAAGAAATAATTGAAAAGTTAGTTAAAGAAAAATTAACTGAGGGCTC
AGAAGTAAGTGCTAATTCAATGAGACCATTAGCATCAGCTGCTCGACAAGCTTCTTCACGACCAAAGCTAAGCCAAGTTT
CAGCGAACGGTTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (25-285)

3D structure

• AlphaFold DB: A2C503

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Acinetobacter baylyi ADP1	64.048	87.798	0.562
recA	Acinetobacter baumannii D1279779	64.286	85.411	0.549
recA	Neisseria gonorrhoeae MS11	59.71	91.512	0.546
recA	Neisseria gonorrhoeae strain FA1090	59.71	91.512	0.546
recA	Neisseria gonorrhoeae MS11	59.71	91.512	0.546
recA	Pseudomonas stutzeri DSM 10701	63.043	85.411	0.538
recA	Helicobacter pylori strain NCTC11637	59.763	89.655	0.536
recA	Helicobacter pylori 26695	59.763	89.655	0.536
recA	Ralstonia pseudosolanacearum GMI1000	63.987	82.493	0.528
recA	Vibrio cholerae O1 biovar El Tor strain E7946	61.801	85.411	0.528
recA	Vibrio cholerae strain A1552	61.801	85.411	0.528
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.459	88.329	0.525
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	56.851	90.981	0.517
recA	Streptococcus pneumoniae Rx1	57.27	89.39	0.512
recA	Streptococcus pneumoniae D39	57.27	89.39	0.512
recA	Streptococcus pneumoniae R6	57.27	89.39	0.512
recA	Streptococcus pneumoniae TIGR4	57.27	89.39	0.512
recA	Glaesserella parasuis strain SC1401	59.443	85.676	0.509
recA	Bacillus subtilis subsp. subtilis str. 168	59.502	85.146	0.507
recA	Streptococcus mitis NCTC 12261	55.952	89.125	0.499
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	55.193	89.39	0.493
recA	Streptococcus mutans UA159	56.615	86.207	0.488
recA	Streptococcus mitis SK321	58.28	83.289	0.485
recA	Lactococcus lactis subsp. cremoris KW2	54.167	89.125	0.483
recA	Streptococcus pyogenes NZ131	55.046	86.737	0.477
recA	Latilactobacillus sakei subsp. sakei 23K	58.689	80.902	0.475